RNA–Protein interactions for RNA: ENST00000219548.8

STUB1-201, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STUB1, Length 1,472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-201ENST00000219548 HNRNPDLO14979 420 aaKnown RBP29.23■■■□□ 2.27
STUB1-201ENST00000219548 BMP8BP34820 402 aa29.23■■■□□ 2.27
STUB1-201ENST00000219548 KCNJ6P48051 423 aa29.23■■■□□ 2.27
STUB1-201ENST00000219548 UBXN11Q5T124 520 aa29.23■■■□□ 2.27
STUB1-201ENST00000219548 SMYD4Q8IYR2 804 aaPredicted RBP29.23■■■□□ 2.27
STUB1-201ENST00000219548 RNPC3Q96LT9 517 aaKnown RBP29.23■■■□□ 2.27
STUB1-201ENST00000219548 ACCSQ96QU6 501 aa29.23■■■□□ 2.27
STUB1-201ENST00000219548 KIAA1468Q9P260 1216 aa29.23■■■□□ 2.27
STUB1-201ENST00000219548 TISP43B9A030 160 aa29.22■■■□□ 2.27
STUB1-201ENST00000219548 BIN1O00499 593 aa29.22■■■□□ 2.27
STUB1-201ENST00000219548 N4BP3O15049 544 aa29.22■■■□□ 2.27
STUB1-201ENST00000219548 EIF3DO15371 548 aaKnown RBP eCLIP29.22■■■□□ 2.27
STUB1-201ENST00000219548 EFCAB14O75071 495 aa29.22■■■□□ 2.27
STUB1-201ENST00000219548 PTMSP20962 102 aa29.22■■■□□ 2.27
STUB1-201ENST00000219548 HOXD13P35453 343 aa29.22■■■□□ 2.27
STUB1-201ENST00000219548 LIG4P49917 911 aa29.22■■■□□ 2.27
STUB1-201ENST00000219548 TMCO2Q7Z6W1 182 aaPredicted RBP29.22■■■□□ 2.27
STUB1-201ENST00000219548 NELFCDQ8IXH7 590 aa29.22■■■□□ 2.27
STUB1-201ENST00000219548 MYOCDQ8IZQ8 938 aa29.22■■■□□ 2.27
STUB1-201ENST00000219548 ZBTB45Q96K62 511 aaPredicted RBP29.22■■■□□ 2.27
STUB1-201ENST00000219548 GBF1Q92538 1859 aa29.21■■■□□ 2.27
STUB1-201ENST00000219548 TRIOBPQ9H2D6 2365 aa29.21■■■□□ 2.27
STUB1-201ENST00000219548 C9IYK1 514 aa29.21■■■□□ 2.27
STUB1-201ENST00000219548 NPTXRO95502 500 aa29.21■■■□□ 2.27
STUB1-201ENST00000219548 NFKBIBQ15653 356 aa29.21■■■□□ 2.27
STUB1-201ENST00000219548 RASIP1Q5U651 963 aa29.21■■■□□ 2.27
STUB1-201ENST00000219548 SLC27A1Q6PCB7 646 aa29.21■■■□□ 2.27
STUB1-201ENST00000219548 ZPBP2Q6X784 338 aa29.21■■■□□ 2.27
STUB1-201ENST00000219548 SLC24A5Q71RS6 500 aa29.21■■■□□ 2.27
STUB1-201ENST00000219548 ZNF507Q8TCN5 953 aa29.21■■■□□ 2.27
STUB1-201ENST00000219548 CCDC51Q96ER9 411 aa29.21■■■□□ 2.27
STUB1-201ENST00000219548 MTIF3Q9H2K0 278 aaKnown RBP29.21■■■□□ 2.27
STUB1-201ENST00000219548 PRO3102Q9H379 93 aa29.21■■■□□ 2.27
STUB1-201ENST00000219548 C1orf112Q9NSG2 853 aa29.21■■■□□ 2.27
STUB1-201ENST00000219548 FAM105AQ9NUU6 356 aa29.21■■■□□ 2.27
STUB1-201ENST00000219548 ANKFY1Q9P2R3 1169 aa29.21■■■□□ 2.27
STUB1-201ENST00000219548 MAPK8IP1Q9UQF2 711 aa29.21■■■□□ 2.27
STUB1-201ENST00000219548 TNFSF13BQ9Y275 285 aa29.21■■■□□ 2.27
STUB1-201ENST00000219548 ZMYM2Q9UBW7 1377 aa29.21■■■□□ 2.27
STUB1-201ENST00000219548 PIGRP01833 764 aa29.2■■■□□ 2.26
STUB1-201ENST00000219548 SLC39A4Q6P5W5 647 aa29.2■■■□□ 2.26
STUB1-201ENST00000219548 ZBTB33Q86T24 672 aa29.2■■■□□ 2.26
STUB1-201ENST00000219548 SYCP3Q8IZU3 236 aa29.2■■■□□ 2.26
STUB1-201ENST00000219548 PTPRHQ9HD43 1115 aa29.2■■■□□ 2.26
STUB1-201ENST00000219548 SLC4A7Q9Y6M7 1214 aa29.2■■■□□ 2.26
STUB1-201ENST00000219548 UBE4BO95155 1302 aa29.2■■■□□ 2.26
STUB1-201ENST00000219548 ANKRD63C9JTQ0 380 aa29.19■■■□□ 2.26
STUB1-201ENST00000219548 AMHP03971 560 aa29.19■■■□□ 2.26
STUB1-201ENST00000219548 ZNF568Q3ZCX4 644 aa29.19■■■□□ 2.26
STUB1-201ENST00000219548 ZNF658Q5TYW1 1059 aaPredicted RBP29.19■■■□□ 2.26
STUB1-201ENST00000219548 TMEM63CQ9P1W3 806 aa29.19■■■□□ 2.26
STUB1-201ENST00000219548 EXOC7Q9UPT5 735 aa29.19■■■□□ 2.26
STUB1-201ENST00000219548 PCDHB2Q9Y5E7 798 aa29.19■■■□□ 2.26
STUB1-201ENST00000219548 TRIP11Q15643 1979 aa29.19■■■□□ 2.26
STUB1-201ENST00000219548 A0A0U1RQF3 1178 aa29.18■■■□□ 2.26
STUB1-201ENST00000219548 ABLIM1O14639 778 aa29.18■■■□□ 2.26
STUB1-201ENST00000219548 TOM1L1O75674 476 aa29.18■■■□□ 2.26
STUB1-201ENST00000219548 HARSP12081 509 aaKnown RBP29.18■■■□□ 2.26
STUB1-201ENST00000219548 PROZP22891 400 aa29.18■■■□□ 2.26
STUB1-201ENST00000219548 BMT2Q1RMZ1 405 aa29.18■■■□□ 2.26
STUB1-201ENST00000219548 FAM43BQ6ZT52 329 aaPredicted RBP29.18■■■□□ 2.26
STUB1-201ENST00000219548 ECHDC2Q86YB7 292 aa29.18■■■□□ 2.26
STUB1-201ENST00000219548 RNF169Q8NCN4 708 aa29.18■■■□□ 2.26
STUB1-201ENST00000219548 ADPGKQ9BRR6 497 aa29.18■■■□□ 2.26
STUB1-201ENST00000219548 TCHPQ9BT92 498 aa29.18■■■□□ 2.26
STUB1-201ENST00000219548 TRAIPQ9BWF2 469 aa29.18■■■□□ 2.26
STUB1-201ENST00000219548 TRIM6Q9C030 488 aaPredicted RBP29.18■■■□□ 2.26
STUB1-201ENST00000219548 HAPLN2Q9GZV7 340 aa29.18■■■□□ 2.26
STUB1-201ENST00000219548 CDT1Q9H211 546 aa29.18■■■□□ 2.26
STUB1-201ENST00000219548 TMEM206Q9H813 350 aa29.18■■■□□ 2.26
STUB1-201ENST00000219548 UPP2O95045 317 aa29.17■■■□□ 2.26
STUB1-201ENST00000219548 ATF7P17544 494 aaPredicted RBP29.17■■■□□ 2.26
STUB1-201ENST00000219548 MATR3P43243 847 aaKnown RBP eCLIP29.17■■■□□ 2.26
STUB1-201ENST00000219548 MORC3Q14149 939 aa29.17■■■□□ 2.26
STUB1-201ENST00000219548 KLHL40Q2TBA0 621 aa29.17■■■□□ 2.26
STUB1-201ENST00000219548 CCDC183Q5T5S1 534 aa29.17■■■□□ 2.26
STUB1-201ENST00000219548 PRPF38BQ5VTL8 546 aaKnown RBP29.17■■■□□ 2.26
STUB1-201ENST00000219548 CAVIN1Q6NZI2 390 aaKnown RBP29.17■■■□□ 2.26
STUB1-201ENST00000219548 FAM117BQ6P1L5 589 aa29.17■■■□□ 2.26
STUB1-201ENST00000219548 MPZL3Q6UWV2 235 aa29.17■■■□□ 2.26
STUB1-201ENST00000219548 TDHQ8IZJ6 230 aa29.17■■■□□ 2.26
STUB1-201ENST00000219548 NXF3Q9H4D5 531 aaKnown RBP29.17■■■□□ 2.26
STUB1-201ENST00000219548 HES2Q9Y543 173 aa29.17■■■□□ 2.26
STUB1-201ENST00000219548 CITO14578 2027 aa29.17■■■□□ 2.26
STUB1-201ENST00000219548 BMP6P22004 513 aa29.17■■■□□ 2.26
STUB1-201ENST00000219548 RAB27AP51159 221 aa29.17■■■□□ 2.26
STUB1-201ENST00000219548 FAM189BP81408 668 aa29.17■■■□□ 2.26
STUB1-201ENST00000219548 SMG8Q8ND04 991 aaKnown RBP29.17■■■□□ 2.26
STUB1-201ENST00000219548 IPPQ9Y573 584 aa29.17■■■□□ 2.26
STUB1-201ENST00000219548 FNDC1Q4ZHG4 1894 aaPredicted RBP29.16■■■□□ 2.26
STUB1-201ENST00000219548 LPPQ93052 612 aa29.16■■■□□ 2.26
STUB1-201ENST00000219548 MEIS3P2A8K0S8 358 aa29.15■■■□□ 2.26
STUB1-201ENST00000219548 CLDN3O15551 220 aa29.15■■■□□ 2.26
STUB1-201ENST00000219548 NOLC1Q14978 699 aaKnown RBP eCLIP29.15■■■□□ 2.26
STUB1-201ENST00000219548 KNOP1Q1ED39 458 aaKnown RBP29.15■■■□□ 2.26
STUB1-201ENST00000219548 DCAF4L1Q3SXM0 396 aa29.15■■■□□ 2.26
STUB1-201ENST00000219548 FAM109BQ6ICB4 259 aaPredicted RBP29.15■■■□□ 2.26
STUB1-201ENST00000219548 CRIPAKQ8N1N5 446 aa29.15■■■□□ 2.26
STUB1-201ENST00000219548 CEP120Q8N960 986 aa29.15■■■□□ 2.26
STUB1-201ENST00000219548 TOP1MTQ969P6 601 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms