RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 GAGE12HA6NDE8 117 aa4.08□□□□□ -1.76
CDKN3-201ENST00000216414 LY86O95711 162 aa4.08□□□□□ -1.76
CDKN3-201ENST00000216414 TYRP1P17643 537 aa4.08□□□□□ -1.76
CDKN3-201ENST00000216414 RGS19P49795 217 aa4.08□□□□□ -1.76
CDKN3-201ENST00000216414 SEC24CP53992 1094 aa4.08□□□□□ -1.76
CDKN3-201ENST00000216414 NHLH2Q02577 135 aa4.08□□□□□ -1.76
CDKN3-201ENST00000216414 FOXI1Q12951 378 aa4.08□□□□□ -1.76
CDKN3-201ENST00000216414 BEAN1Q3B7T3 259 aa4.08□□□□□ -1.76
CDKN3-201ENST00000216414 PRR16Q569H4 304 aa4.08□□□□□ -1.76
CDKN3-201ENST00000216414 C2orf27AQ580R0 203 aa4.08□□□□□ -1.76
CDKN3-201ENST00000216414 UBE2R2Q712K3 238 aaPredicted RBP4.08□□□□□ -1.76
CDKN3-201ENST00000216414 MYPNQ86TC9 1320 aa4.08□□□□□ -1.76
CDKN3-201ENST00000216414 JMYQ8N9B5 988 aa4.08□□□□□ -1.76
CDKN3-201ENST00000216414 BOLLQ8N9W6 283 aaKnown RBP4.08□□□□□ -1.76
CDKN3-201ENST00000216414 NELL1Q92832 810 aa4.08□□□□□ -1.76
CDKN3-201ENST00000216414 FERMT2Q96AC1 680 aa4.08□□□□□ -1.76
CDKN3-201ENST00000216414 COQ10AQ96MF6 247 aa4.08□□□□□ -1.76
CDKN3-201ENST00000216414 CLUHP3Q96NS8 147 aa4.08□□□□□ -1.76
CDKN3-201ENST00000216414 SPATA5L1Q9BVQ7 753 aa4.08□□□□□ -1.76
CDKN3-201ENST00000216414 TEX101Q9BY14 249 aa4.08□□□□□ -1.76
CDKN3-201ENST00000216414 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.08□□□□□ -1.76
CDKN3-201ENST00000216414 USP18Q9UMW8 372 aa4.08□□□□□ -1.76
CDKN3-201ENST00000216414 CLCA2Q9UQC9 943 aa4.08□□□□□ -1.76
CDKN3-201ENST00000216414 CHST2Q9Y4C5 530 aa4.08□□□□□ -1.76
CDKN3-201ENST00000216414 SPO11Q9Y5K1 396 aa4.08□□□□□ -1.76
CDKN3-201ENST00000216414 ST20-MTHFSA0A0A6YYL1 179 aa4.07□□□□□ -1.76
CDKN3-201ENST00000216414 DIRC3C9JPN6 131 aa4.07□□□□□ -1.76
CDKN3-201ENST00000216414 CBX4O00257 560 aa4.07□□□□□ -1.76
CDKN3-201ENST00000216414 DNAJC8O75937 253 aaPredicted RBP4.07□□□□□ -1.76
CDKN3-201ENST00000216414 JMJD7P0C870 316 aa4.07□□□□□ -1.76
CDKN3-201ENST00000216414 SPATA31D3P0C874 917 aa4.07□□□□□ -1.76
CDKN3-201ENST00000216414 FLT3P36888 993 aa4.07□□□□□ -1.76
CDKN3-201ENST00000216414 BMPR1AP36894 532 aa4.07□□□□□ -1.76
CDKN3-201ENST00000216414 RBM25P49756 843 aaKnown RBP4.07□□□□□ -1.76
CDKN3-201ENST00000216414 TP53BP2Q13625 1128 aa4.07□□□□□ -1.76
CDKN3-201ENST00000216414 SPATA31D4Q6ZUB0 917 aa4.07□□□□□ -1.76
CDKN3-201ENST00000216414 ZZZ3Q8IYH5 903 aa4.07□□□□□ -1.76
CDKN3-201ENST00000216414 MSL3Q8N5Y2 521 aaKnown RBP4.07□□□□□ -1.76
CDKN3-201ENST00000216414 CDYL2Q8N8U2 506 aa4.07□□□□□ -1.76
CDKN3-201ENST00000216414 SIMC1Q8NDZ2 872 aa4.07□□□□□ -1.76
CDKN3-201ENST00000216414 PPP1R14CQ8TAE6 165 aa4.07□□□□□ -1.76
CDKN3-201ENST00000216414 LINC00476Q8WZB0 136 aa4.07□□□□□ -1.76
CDKN3-201ENST00000216414 OXSMQ9NWU1 459 aa4.07□□□□□ -1.76
CDKN3-201ENST00000216414 H2AFY2Q9P0M6 372 aaPredicted RBP4.07□□□□□ -1.76
CDKN3-201ENST00000216414 USP36Q9P275 1121 aaKnown RBP4.07□□□□□ -1.76
CDKN3-201ENST00000216414 DKK2Q9UBU2 259 aa4.07□□□□□ -1.76
CDKN3-201ENST00000216414 TESQ9UGI8 421 aaKnown RBP4.07□□□□□ -1.76
CDKN3-201ENST00000216414 PIPSLA2A3N6 862 aa4.06□□□□□ -1.76
CDKN3-201ENST00000216414 PROB1E7EW31 1015 aa4.06□□□□□ -1.76
CDKN3-201ENST00000216414 ELL2O00472 640 aaPredicted RBP4.06□□□□□ -1.76
CDKN3-201ENST00000216414 ZNF185O15231 689 aa4.06□□□□□ -1.76
CDKN3-201ENST00000216414 C1RP00736 705 aa4.06□□□□□ -1.76
CDKN3-201ENST00000216414 HLA-DOAP06340 250 aa4.06□□□□□ -1.76
CDKN3-201ENST00000216414 ZSCAN20P17040 1043 aaPredicted RBP4.06□□□□□ -1.76
CDKN3-201ENST00000216414 XPAP23025 273 aaPredicted RBP4.06□□□□□ -1.76
CDKN3-201ENST00000216414 CD40P25942 277 aa4.06□□□□□ -1.76
CDKN3-201ENST00000216414 DDX6P26196 483 aaKnown RBP eCLIP4.06□□□□□ -1.76
CDKN3-201ENST00000216414 ELLP55199 621 aaPredicted RBP4.06□□□□□ -1.76
CDKN3-201ENST00000216414 PDCD4Q53EL6 469 aaKnown RBP4.06□□□□□ -1.76
CDKN3-201ENST00000216414 FNDC3BQ53EP0 1204 aaKnown RBP4.06□□□□□ -1.76
CDKN3-201ENST00000216414 PAPD7Q5XG87 772 aaKnown RBP4.06□□□□□ -1.76
CDKN3-201ENST00000216414 CREB3L3Q68CJ9 461 aa4.06□□□□□ -1.76
CDKN3-201ENST00000216414 TAS1R1Q7RTX1 841 aa4.06□□□□□ -1.76
CDKN3-201ENST00000216414 HDGFL2Q7Z4V5 671 aaPredicted RBP4.06□□□□□ -1.76
CDKN3-201ENST00000216414 OR10H5Q8NGA6 315 aa4.06□□□□□ -1.76
CDKN3-201ENST00000216414 ZMAT4Q9H898 229 aa4.06□□□□□ -1.76
CDKN3-201ENST00000216414 RNF181Q9P0P0 153 aa4.06□□□□□ -1.76
CDKN3-201ENST00000216414 POGKQ9P215 609 aa4.06□□□□□ -1.76
CDKN3-201ENST00000216414 ZKSCAN5Q9Y2L8 839 aa4.06□□□□□ -1.76
CDKN3-201ENST00000216414 MAP3K2Q9Y2U5 619 aa4.06□□□□□ -1.76
CDKN3-201ENST00000216414 SPDEFO95238 335 aa4.05□□□□□ -1.76
CDKN3-201ENST00000216414 ITGAMP11215 1152 aa4.05□□□□□ -1.76
CDKN3-201ENST00000216414 APBA1Q02410 837 aa4.05□□□□□ -1.76
CDKN3-201ENST00000216414 MGAT5Q09328 741 aa4.05□□□□□ -1.76
CDKN3-201ENST00000216414 DDB1Q16531 1140 aa4.05□□□□□ -1.76
CDKN3-201ENST00000216414 CFAP100Q494V2 611 aa4.05□□□□□ -1.76
CDKN3-201ENST00000216414 ABHD17BQ5VST6 288 aa4.05□□□□□ -1.76
CDKN3-201ENST00000216414 ANKS6Q68DC2 871 aa4.05□□□□□ -1.76
CDKN3-201ENST00000216414 CDCA2Q69YH5 1023 aaPredicted RBP4.05□□□□□ -1.76
CDKN3-201ENST00000216414 LMBR1LQ6UX01 489 aa4.05□□□□□ -1.76
CDKN3-201ENST00000216414 ESPNLQ6ZVH7 1005 aa4.05□□□□□ -1.76
CDKN3-201ENST00000216414 GPRIN1Q7Z2K8 1008 aa4.05□□□□□ -1.76
CDKN3-201ENST00000216414 SYT12Q8IV01 421 aa4.05□□□□□ -1.76
CDKN3-201ENST00000216414 SLC44A3Q8N4M1 653 aa4.05□□□□□ -1.76
CDKN3-201ENST00000216414 CAGE1Q8TC20 777 aa4.05□□□□□ -1.76
CDKN3-201ENST00000216414 ASB10Q8WXI3 467 aa4.05□□□□□ -1.76
CDKN3-201ENST00000216414 CDC5LQ99459 802 aaKnown RBP4.05□□□□□ -1.76
CDKN3-201ENST00000216414 FDXACB1Q9BRP7 624 aaPredicted RBP4.05□□□□□ -1.76
CDKN3-201ENST00000216414 TLK1Q9UKI8 766 aa4.05□□□□□ -1.76
CDKN3-201ENST00000216414 USP15Q9Y4E8 981 aaPredicted RBP4.05□□□□□ -1.76
CDKN3-201ENST00000216414 ARHGEF17Q96PE2 2063 aaPredicted RBP4.05□□□□□ -1.76
CDKN3-201ENST00000216414 NRP2O60462 931 aa4.04□□□□□ -1.76
CDKN3-201ENST00000216414 PRAMEF4O60810 478 aa4.04□□□□□ -1.76
CDKN3-201ENST00000216414 SEC24DO94855 1032 aaPredicted RBP4.04□□□□□ -1.76
CDKN3-201ENST00000216414 CLEC2LP0C7M8 214 aa4.04□□□□□ -1.76
CDKN3-201ENST00000216414 ATP2A2P16615 1042 aaKnown RBP4.04□□□□□ -1.76
CDKN3-201ENST00000216414 MGAT1P26572 445 aa4.04□□□□□ -1.76
CDKN3-201ENST00000216414 NRG3P56975 720 aa4.04□□□□□ -1.76
CDKN3-201ENST00000216414 BLOC1S1P78537 153 aa4.04□□□□□ -1.76
CDKN3-201ENST00000216414 MXRA7P84157 204 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms