RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 C1RP00736 705 aa17.65■□□□□ 0.42
ERCC1-201ENST00000013807 ITGA4P13612 1032 aa17.65■□□□□ 0.42
ERCC1-201ENST00000013807 GLRA2P23416 452 aa17.65■□□□□ 0.42
ERCC1-201ENST00000013807 TXKP42681 527 aa17.65■□□□□ 0.42
ERCC1-201ENST00000013807 ORC2Q13416 577 aaPredicted RBP17.65■□□□□ 0.42
ERCC1-201ENST00000013807 CAPSQ13938 189 aa17.65■□□□□ 0.42
ERCC1-201ENST00000013807 TRIM29Q14134 588 aa17.65■□□□□ 0.42
ERCC1-201ENST00000013807 ATAT1Q5SQI0 421 aa17.65■□□□□ 0.42
ERCC1-201ENST00000013807 GPR65Q8IYL9 337 aa17.65■□□□□ 0.42
ERCC1-201ENST00000013807 ZDHHC14Q8IZN3 488 aa17.65■□□□□ 0.42
ERCC1-201ENST00000013807 ASAP3Q8TDY4 903 aa17.65■□□□□ 0.42
ERCC1-201ENST00000013807 AUTS2Q8WXX7 1259 aa17.65■□□□□ 0.42
ERCC1-201ENST00000013807 KLHL5Q96PQ7 755 aa17.65■□□□□ 0.42
ERCC1-201ENST00000013807 FAM193BQ96PV7 902 aaPredicted RBP17.65■□□□□ 0.42
ERCC1-201ENST00000013807 LLPHQ9BRT6 129 aaKnown RBP17.65■□□□□ 0.42
ERCC1-201ENST00000013807 APOL5Q9BWW9 433 aa17.65■□□□□ 0.42
ERCC1-201ENST00000013807 EIF2AQ9BY44 585 aaKnown RBP17.65■□□□□ 0.42
ERCC1-201ENST00000013807 RHOBTB2Q9BYZ6 727 aa17.65■□□□□ 0.42
ERCC1-201ENST00000013807 BMP2KQ9NSY1 1161 aaPredicted RBP17.65■□□□□ 0.42
ERCC1-201ENST00000013807 GIT1Q9Y2X7 761 aa17.65■□□□□ 0.42
ERCC1-201ENST00000013807 DOCK8Q8NF50 2099 aa17.65■□□□□ 0.42
ERCC1-201ENST00000013807 A0A1B0GUA9 196 aa17.64■□□□□ 0.41
ERCC1-201ENST00000013807 ARL5CA6NH57 179 aa17.64■□□□□ 0.41
ERCC1-201ENST00000013807 PAPLNO95428 1278 aa17.64■□□□□ 0.41
ERCC1-201ENST00000013807 SOD2P04179 222 aa17.64■□□□□ 0.41
ERCC1-201ENST00000013807 EPCAMP16422 314 aa17.64■□□□□ 0.41
ERCC1-201ENST00000013807 ARF4P18085 180 aaPredicted RBP17.64■□□□□ 0.41
ERCC1-201ENST00000013807 CLCN4P51793 760 aa17.64■□□□□ 0.41
ERCC1-201ENST00000013807 UBALD2Q8IYN6 164 aa17.64■□□□□ 0.41
ERCC1-201ENST00000013807 GSTCDQ8NEC7 633 aa17.64■□□□□ 0.41
ERCC1-201ENST00000013807 POLR3CQ9BUI4 534 aaPredicted RBP17.64■□□□□ 0.41
ERCC1-201ENST00000013807 EMILIN2Q9BXX0 1053 aa17.64■□□□□ 0.41
ERCC1-201ENST00000013807 GBP3Q9H0R5 595 aa17.64■□□□□ 0.41
ERCC1-201ENST00000013807 TMEM60Q9H2L4 133 aa17.64■□□□□ 0.41
ERCC1-201ENST00000013807 RNF39Q9H2S5 420 aa17.64■□□□□ 0.41
ERCC1-201ENST00000013807 TUFT1Q9NNX1 390 aa17.64■□□□□ 0.41
ERCC1-201ENST00000013807 MARCH5Q9NX47 278 aa17.64■□□□□ 0.41
ERCC1-201ENST00000013807 CDH22Q9UJ99 828 aa17.64■□□□□ 0.41
ERCC1-201ENST00000013807 DBR1Q9UK59 544 aaKnown RBP17.64■□□□□ 0.41
ERCC1-201ENST00000013807 SSX2IPQ9Y2D8 614 aa17.64■□□□□ 0.41
ERCC1-201ENST00000013807 C2CD4DB7Z1M9 353 aa17.63■□□□□ 0.41
ERCC1-201ENST00000013807 INO80B-WBP1J3KQ70 363 aa17.63■□□□□ 0.41
ERCC1-201ENST00000013807 SEC24BO95487 1268 aa17.63■□□□□ 0.41
ERCC1-201ENST00000013807 POMCP01189 267 aa17.63■□□□□ 0.41
ERCC1-201ENST00000013807 CNPP09543 421 aaKnown RBP17.63■□□□□ 0.41
ERCC1-201ENST00000013807 KIAA0319Q5VV43 1072 aa17.63■□□□□ 0.41
ERCC1-201ENST00000013807 PPP4R3CPQ6ZMV5 832 aa17.63■□□□□ 0.41
ERCC1-201ENST00000013807 GPR149Q86SP6 731 aa17.63■□□□□ 0.41
ERCC1-201ENST00000013807 CATSPER3Q86XQ3 398 aa17.63■□□□□ 0.41
ERCC1-201ENST00000013807 PLCD3Q8N3E9 789 aa17.63■□□□□ 0.41
ERCC1-201ENST00000013807 TMEM87AQ8NBN3 555 aa17.63■□□□□ 0.41
ERCC1-201ENST00000013807 PRIMPOLQ96LW4 560 aa17.63■□□□□ 0.41
ERCC1-201ENST00000013807 GAD1Q99259 594 aa17.63■□□□□ 0.41
ERCC1-201ENST00000013807 FOXP1Q9H334 677 aaPredicted RBP17.63■□□□□ 0.41
ERCC1-201ENST00000013807 MRPL17Q9NRX2 175 aaKnown RBP17.63■□□□□ 0.41
ERCC1-201ENST00000013807 MIOSQ9NXC5 875 aa17.63■□□□□ 0.41
ERCC1-201ENST00000013807 LIMCH1Q9UPQ0 1083 aa17.63■□□□□ 0.41
ERCC1-201ENST00000013807 SORCS3Q9UPU3 1222 aa17.63■□□□□ 0.41
ERCC1-201ENST00000013807 POTEMA6NI47 508 aa17.62■□□□□ 0.41
ERCC1-201ENST00000013807 MUTP22033 750 aa17.62■□□□□ 0.41
ERCC1-201ENST00000013807 RPA1P27694 616 aa17.62■□□□□ 0.41
ERCC1-201ENST00000013807 NUBP1P53384 320 aa17.62■□□□□ 0.41
ERCC1-201ENST00000013807 FAM187BQ17R55 369 aa17.62■□□□□ 0.41
ERCC1-201ENST00000013807 RARS2Q5T160 578 aaKnown RBP17.62■□□□□ 0.41
ERCC1-201ENST00000013807 CDCA2Q69YH5 1023 aaPredicted RBP17.62■□□□□ 0.41
ERCC1-201ENST00000013807 SLC27A1Q6PCB7 646 aa17.62■□□□□ 0.41
ERCC1-201ENST00000013807 CYP26C1Q6V0L0 522 aa17.62■□□□□ 0.41
ERCC1-201ENST00000013807 C15orf39Q6ZRI6 1047 aa17.62■□□□□ 0.41
ERCC1-201ENST00000013807 CABP7Q86V35 215 aa17.62■□□□□ 0.41
ERCC1-201ENST00000013807 SUGP1Q8IWZ8 645 aaKnown RBP17.62■□□□□ 0.41
ERCC1-201ENST00000013807 C12orf76Q8N812 135 aaPredicted RBP17.62■□□□□ 0.41
ERCC1-201ENST00000013807 MCPH1Q8NEM0 835 aa17.62■□□□□ 0.41
ERCC1-201ENST00000013807 PIGOQ8TEQ8 1089 aa17.62■□□□□ 0.41
ERCC1-201ENST00000013807 CPB2Q96IY4 423 aa17.62■□□□□ 0.41
ERCC1-201ENST00000013807 NACC1Q96RE7 527 aa17.62■□□□□ 0.41
ERCC1-201ENST00000013807 RPS6KC1Q96S38 1066 aa17.62■□□□□ 0.41
ERCC1-201ENST00000013807 FZD8Q9H461 694 aa17.62■□□□□ 0.41
ERCC1-201ENST00000013807 SFXN1Q9H9B4 322 aa17.62■□□□□ 0.41
ERCC1-201ENST00000013807 RXFP1Q9HBX9 757 aa17.62■□□□□ 0.41
ERCC1-201ENST00000013807 CHST7Q9NS84 486 aa17.62■□□□□ 0.41
ERCC1-201ENST00000013807 MLH1P40692 756 aa17.61■□□□□ 0.41
ERCC1-201ENST00000013807 MTMR3Q13615 1198 aa17.61■□□□□ 0.41
ERCC1-201ENST00000013807 SAFBQ15424 915 aaKnown RBP eCLIP17.61■□□□□ 0.41
ERCC1-201ENST00000013807 IER5LQ5T953 404 aa17.61■□□□□ 0.41
ERCC1-201ENST00000013807 HACE1Q8IYU2 909 aa17.61■□□□□ 0.41
ERCC1-201ENST00000013807 KREMEN2Q8NCW0 462 aa17.61■□□□□ 0.41
ERCC1-201ENST00000013807 CMASQ8NFW8 434 aaPredicted RBP17.61■□□□□ 0.41
ERCC1-201ENST00000013807 FBXO18Q8NFZ0 1043 aa17.61■□□□□ 0.41
ERCC1-201ENST00000013807 ZFP42Q96MM3 310 aa17.61■□□□□ 0.41
ERCC1-201ENST00000013807 HERC2P3Q9BVR0 1158 aa17.61■□□□□ 0.41
ERCC1-201ENST00000013807 HES2Q9Y543 173 aa17.61■□□□□ 0.41
ERCC1-201ENST00000013807 DOCK6Q96HP0 2047 aa17.6■□□□□ 0.41
ERCC1-201ENST00000013807 MED24O75448 989 aa17.6■□□□□ 0.41
ERCC1-201ENST00000013807 KLRC2P26717 231 aa17.6■□□□□ 0.41
ERCC1-201ENST00000013807 MCM7P33993 719 aa17.6■□□□□ 0.41
ERCC1-201ENST00000013807 CA8P35219 290 aa17.6■□□□□ 0.41
ERCC1-201ENST00000013807 DSG1Q02413 1049 aa17.6■□□□□ 0.41
ERCC1-201ENST00000013807 KANK3Q6NY19 840 aa17.6■□□□□ 0.41
ERCC1-201ENST00000013807 ALYREFQ86V81 257 aaKnown RBP17.6■□□□□ 0.41
ERCC1-201ENST00000013807 PRSS33Q8NF86 280 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms