RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 DNERQ8NFT8 737 aa11.06□□□□□ -0.64
NIPAL3-201ENST00000003912 EXOC4Q96A65 974 aa11.06□□□□□ -0.64
NIPAL3-201ENST00000003912 PGK2P07205 417 aa11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 SUPT20HL2P0C7V6 817 aa11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 TAP1Q03518 808 aa11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 SGSM1Q2NKQ1 1148 aa11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 KIAA1755Q5JYT7 1200 aa11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 MGARPQ8TDB4 240 aa11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 IP6K2Q9UHH9 426 aa11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 MAGED2Q9UNF1 606 aaPredicted RBP11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 SNX9Q9Y5X1 595 aa11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 BUB1BO60566 1050 aaPredicted RBP11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 VIL1P09327 827 aaKnown RBP11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 ACOT2P49753 483 aa11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 C15orf52Q6ZUT6 534 aaKnown RBP11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 ARHGAP24Q8N264 748 aa11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 GPR182O15218 404 aa11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 EIF3DO15371 548 aaKnown RBP eCLIP11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 THPOP40225 353 aa11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 ZNF131P52739 623 aa11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 CDK17Q00537 523 aa11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 DCAF4L1Q3SXM0 396 aa11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 SV2CQ496J9 727 aa11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 DCP1BQ8IZD4 617 aaKnown RBP11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 CFAP57Q96MR6 1250 aa11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 PITPNM2Q9BZ72 1349 aa11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 KRT7P08729 469 aa11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 OAZ1P54368 228 aa11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 INHBEP58166 350 aa11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 ASPHQ12797 758 aa11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 SOCS4Q8WXH5 440 aa11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 SLC4A9Q96Q91 983 aa11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 MRIQ9BWK5 157 aa11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 LRRC4BQ9NT99 713 aa11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 FNDC3AQ9Y2H6 1198 aaKnown RBP11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 POC1B-GALNT4F8VUJ3 575 aa11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 MSH4O15457 936 aa11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 CA4P22748 312 aa11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 PMLP29590 882 aa11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 TM4SF1P30408 202 aa11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 SLC26A2P50443 739 aa11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 NLRP11P59045 1033 aaKnown RBP11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 SNX17Q15036 470 aa11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 LLGL1Q15334 1064 aa11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 SNRNP35Q16560 246 aaKnown RBP11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 FAM117BQ6P1L5 589 aa11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 TTC25Q96NG3 672 aa11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 EDEM3Q9BZQ6 932 aa11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 KLC2Q9H0B6 622 aa11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 ABHD10Q9NUJ1 306 aa11.05□□□□□ -0.64
NIPAL3-201ENST00000003912 GOLGA8KD6RF30 607 aa11.04□□□□□ -0.64
NIPAL3-201ENST00000003912 MUTP22033 750 aa11.04□□□□□ -0.64
NIPAL3-201ENST00000003912 SHMT1P34896 483 aa11.04□□□□□ -0.64
NIPAL3-201ENST00000003912 KRT17Q04695 432 aa11.04□□□□□ -0.64
NIPAL3-201ENST00000003912 FAM102AQ5T9C2 384 aaPredicted RBP11.04□□□□□ -0.64
NIPAL3-201ENST00000003912 LMBRD2Q68DH5 695 aaPredicted RBP11.04□□□□□ -0.64
NIPAL3-201ENST00000003912 ADGRA1Q86SQ6 560 aa11.04□□□□□ -0.64
NIPAL3-201ENST00000003912 EFCC1Q9HA90 598 aa11.04□□□□□ -0.64
NIPAL3-201ENST00000003912 CYP26B1Q9NR63 512 aa11.04□□□□□ -0.64
NIPAL3-201ENST00000003912 GPRC5DQ9NZD1 345 aa11.04□□□□□ -0.64
NIPAL3-201ENST00000003912 KLHL8Q9P2G9 620 aaPredicted RBP11.04□□□□□ -0.64
NIPAL3-201ENST00000003912 SREBF1P36956 1147 aa11.04□□□□□ -0.64
NIPAL3-201ENST00000003912 ANKRD40Q6AI12 368 aa11.04□□□□□ -0.64
NIPAL3-201ENST00000003912 TTC30AQ86WT1 665 aa11.04□□□□□ -0.64
NIPAL3-201ENST00000003912 UHMK1Q8TAS1 419 aaKnown RBP11.04□□□□□ -0.64
NIPAL3-201ENST00000003912 DHX38Q92620 1227 aaKnown RBP11.04□□□□□ -0.64
NIPAL3-201ENST00000003912 UNC45AQ9H3U1 944 aa11.04□□□□□ -0.64
NIPAL3-201ENST00000003912 TLK1Q9UKI8 766 aa11.04□□□□□ -0.64
NIPAL3-201ENST00000003912 RHOBTB3O94955 611 aa11.04□□□□□ -0.64
NIPAL3-201ENST00000003912 CYBBP04839 570 aa11.04□□□□□ -0.64
NIPAL3-201ENST00000003912 PAMP19021 973 aa11.04□□□□□ -0.64
NIPAL3-201ENST00000003912 PCSK1P29120 753 aa11.04□□□□□ -0.64
NIPAL3-201ENST00000003912 SOX5P35711 763 aa11.04□□□□□ -0.64
NIPAL3-201ENST00000003912 MSH2P43246 934 aa11.04□□□□□ -0.64
NIPAL3-201ENST00000003912 PLTPP55058 493 aa11.04□□□□□ -0.64
NIPAL3-201ENST00000003912 RAD51Q06609 339 aa11.04□□□□□ -0.64
NIPAL3-201ENST00000003912 PCNX4Q63HM2 1172 aa11.04□□□□□ -0.64
NIPAL3-201ENST00000003912 APOBEC3HQ6NTF7 200 aaKnown RBP11.04□□□□□ -0.64
NIPAL3-201ENST00000003912 FBXO16Q8IX29 292 aaPredicted RBP11.04□□□□□ -0.64
NIPAL3-201ENST00000003912 PDIK1LQ8N165 341 aa11.04□□□□□ -0.64
NIPAL3-201ENST00000003912 MCUR1Q96AQ8 359 aa11.04□□□□□ -0.64
NIPAL3-201ENST00000003912 HDAC11Q96DB2 347 aa11.04□□□□□ -0.64
NIPAL3-201ENST00000003912 NUDCD1Q96RS6 583 aa11.04□□□□□ -0.64
NIPAL3-201ENST00000003912 LSM7Q9UK45 103 aaKnown RBP11.04□□□□□ -0.64
NIPAL3-201ENST00000003912 A0A1W2PQC6 194 aa11.04□□□□□ -0.64
NIPAL3-201ENST00000003912 HOXA2O43364 376 aa11.04□□□□□ -0.64
NIPAL3-201ENST00000003912 CYP11B2P19099 503 aa11.04□□□□□ -0.64
NIPAL3-201ENST00000003912 NCOA4Q13772 614 aa11.04□□□□□ -0.64
NIPAL3-201ENST00000003912 ZNF564Q8TBZ8 553 aaPredicted RBP11.04□□□□□ -0.64
NIPAL3-201ENST00000003912 TRPV6Q9H1D0 765 aa11.04□□□□□ -0.64
NIPAL3-201ENST00000003912 HPS5Q9UPZ3 1129 aa11.04□□□□□ -0.64
NIPAL3-201ENST00000003912 NEMP1O14524 444 aa11.03□□□□□ -0.64
NIPAL3-201ENST00000003912 CREB3O43889 395 aa11.03□□□□□ -0.64
NIPAL3-201ENST00000003912 ZNF189O75820 626 aaPredicted RBP11.03□□□□□ -0.64
NIPAL3-201ENST00000003912 EDRF1Q3B7T1 1238 aa11.03□□□□□ -0.64
NIPAL3-201ENST00000003912 RABGGTAQ92696 567 aa11.03□□□□□ -0.64
NIPAL3-201ENST00000003912 ATP6V1E2Q96A05 226 aa11.03□□□□□ -0.64
NIPAL3-201ENST00000003912 PXMP2Q9NR77 195 aa11.03□□□□□ -0.64
NIPAL3-201ENST00000003912 SMYD2Q9NRG4 433 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms