RNA–Protein interactions for RNA: ENSMUST00000116359.2

Ctc1-202, Transcript of CST complex subunit CTC1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ctc1, Length 3,978 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-202ENSMUST00000116359 PtgisO35074 501 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 TbcaP48428 108 aaKnown RBP10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Znf367Q0VDT2 340 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Trappc10Q3TLI0 1259 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Mars2Q499X9 586 aaKnown RBP10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Tmem65Q4VAE3 234 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Rsad1Q5SUV1 442 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Nlrp9aQ66X03 949 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Actn1Q7TPR4 892 aaKnown RBP10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Wnk4Q80UE6 1222 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Fam210aQ8BGY7 273 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 DcakdQ8BHC4 231 aaKnown RBP10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Unc5bQ8K1S3 945 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Sec16bQ91XT4 1051 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Cabp7Q91ZM8 215 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Tacc2Q9JJG0 1149 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 EsrraO08580 422 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Dnmt3aO88508 908 aaKnown RBP10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Cd3dP04235 173 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 SagP20443 403 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Abcb4P21440 1276 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Gja8P28236 440 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Elk4P41158 430 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Cyth2P63034 400 aaKnown RBP10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Vmn1r209Q5NC97 312 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Cdcp1Q5U462 833 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Tfe3Q64092 572 aaKnown RBP10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Rasgrp4Q8BTM9 673 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Ttc19Q8CC21 365 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Slc35b4Q8CIA5 331 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Clptm1Q8VBZ3 664 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 BsndQ8VIM4 307 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Prmt3Q922H1 532 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Ciao1Q99KN2 339 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Erp44Q9D1Q6 406 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 TtpalQ9D3D0 343 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Lonrf3Q9D4H7 753 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Fip1l1Q9D824 581 aaKnown RBP10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Smok2bQ9QYZ3 484 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Smok2aQ9QYZ6 504 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Adamtsl1Q8BLI0 1745 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Gm14525B1AZA0 212 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Zc3h7aE9PWW6 970 aaKnown RBP10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Gm8444F6XS56 118 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Abl1P00520 1123 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Eef2P58252 858 aaKnown RBP10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Ampd1Q3V1D3 745 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Gm10488Q4KL05 212 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Gm14685Q52KH6 695 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 HarsQ61035 509 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Krt31Q61765 416 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Gm14819Q62478 212 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Foxb2Q64733 428 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Mtss1lQ6P9S0 715 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Prr18Q6PAN7 307 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Jmjd4Q8BFT6 427 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 SowahcQ8C0J6 512 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Cog5Q8C0L8 829 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Nemp2Q8CB65 421 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Epn2Q8CHU3 595 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Klrb1fQ8VD98 217 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Alpk1Q9CXB8 1231 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Stard3nlQ9DCI3 235 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Nudt12Q9DCN1 462 aa10.87□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Btbd35f16A0A087WSN2 498 aa10.86□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Ifit3bE9PV48 403 aa10.86□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Ebf3O08791 596 aa10.86□□□□□ -0.67
Ctc1-202ENSMUST00000116359 MlxipQ2VPU4 917 aa10.86□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Madcam1Q61826 405 aa10.86□□□□□ -0.67
Ctc1-202ENSMUST00000116359 GmipQ6PGG2 971 aa10.86□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Llgl1Q80Y17 1036 aa10.86□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Kcnv2Q8CFS6 562 aa10.86□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Slc26a7Q8R2Z3 656 aa10.86□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Ltbp1Q8CG19 1712 aa10.86□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Myl3P09542 204 aa10.86□□□□□ -0.67
Ctc1-202ENSMUST00000116359 RxrgP28705 463 aa10.86□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Prim2P33610 505 aa10.86□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Cdc25aP48964 514 aa10.86□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Scarf2P59222 833 aa10.86□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Muc3aQ3U5A2 218 aa10.86□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Ppp1r14bQ62084 147 aa10.86□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Svs3bQ8BZH8 265 aa10.86□□□□□ -0.67
Ctc1-202ENSMUST00000116359 BrdtQ91Y44 956 aa10.86□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Polr3cQ9D483 533 aa10.86□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Kcnq2Q9Z351 759 aa10.86□□□□□ -0.67
Ctc1-202ENSMUST00000116359 RptorQ8K4Q0 1335 aa10.86□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Tnrc6cQ3UHC0 1690 aaKnown RBP10.86□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Aff2O55112 1272 aa10.86□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Orc4O88708 433 aa10.86□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Epas1P97481 874 aa10.86□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Sec23aQ01405 765 aa10.86□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Rnf10Q3UIW5 804 aa10.86□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Fam198bQ3UPI1 517 aa10.86□□□□□ -0.67
Ctc1-202ENSMUST00000116359 BcanQ61361 883 aa10.86□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Capn3Q64691 821 aa10.86□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Krt9Q6RHW0 743 aa10.86□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Dhx33Q80VY9 698 aaKnown RBP10.86□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Q80WR5 230 aa10.86□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Rnaseh2bQ80ZV0 308 aa10.86□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Usp1Q8BJQ2 784 aa10.86□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms