RNA–Protein interactions for RNA: ENSMUST00000111438.1

Ddx55-202, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

TSL 2 BASIC

Gene Ddx55, Length 2,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-202ENSMUST00000111438 Arih1Q9Z1K5 555 aa13.31□□□□□ -0.28
Ddx55-202ENSMUST00000111438 ThadaA8C756 1938 aa13.3□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Ugt1a8D3Z748 530 aa13.3□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Ugt1a10E9PXN7 530 aa13.3□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Oas1fQ14AZ4 364 aa13.3□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Mfhas1Q3V1N1 1048 aa13.3□□□□□ -0.28
Ddx55-202ENSMUST00000111438 L1td1Q587J6 782 aaKnown RBP13.3□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Cyp4f39Q8BGU0 532 aa13.3□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Pnpla2Q8BJ56 486 aa13.3□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Nop9Q8BMC4 636 aaKnown RBP13.3□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Ankef1Q9D2J7 775 aa13.3□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Ccdc89Q9DA73 370 aa13.3□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Elf2Q9JHC9 593 aa13.3□□□□□ -0.28
Ddx55-202ENSMUST00000111438 B4galt5Q9JMK0 388 aa13.3□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Kiaa0100Q5SYL3 2234 aa13.3□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Sox5P35710 763 aa13.3□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Gabpb2P81069 414 aa13.3□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Zkscan4Q5SZT6 480 aa13.3□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Atp13a4Q5XF90 1193 aa13.3□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Q5XFZ0 217 aa13.3□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Igbp1Q61249 340 aa13.3□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Ddx10Q80Y44 875 aaKnown RBP13.3□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Slc9b1Q8C0X2 565 aa13.3□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Rassf4Q8CB96 322 aa13.3□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Gm11983V9GXS8 105 aa13.3□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Dock3Q8CIQ7 2027 aa13.3□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Gucy2dA0A0U1RPR8 1117 aa13.29□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Trim12cD3Z3L3 497 aa13.29□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Gimap9G3X987 291 aa13.29□□□□□ -0.28
Ddx55-202ENSMUST00000111438 H2afxP27661 143 aaKnown RBP13.29□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Rfc1P35601 1131 aa13.29□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Cd86P42082 309 aa13.29□□□□□ -0.28
Ddx55-202ENSMUST00000111438 SPINDOCQ05AH6 381 aa13.29□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Git1Q68FF6 770 aa13.29□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Inppl1Q6P549 1257 aa13.29□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Ccser1Q8C0C4 895 aa13.29□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Ano2Q8CFW1 1002 aa13.29□□□□□ -0.28
Ddx55-202ENSMUST00000111438 DcpsQ9DAR7 338 aa13.29□□□□□ -0.28
Ddx55-202ENSMUST00000111438 AmfrQ9R049 643 aa13.29□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Lama2Q60675 3118 aaKnown RBP13.29□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Gm11985A0A1B0GS61 206 aa13.29□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Btnl4A2CG29 586 aa13.29□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Gm12800B1AUV4 484 aa13.29□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Gm12794L7MTS5 483 aa13.29□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Gm3164L7N2B9 238 aa13.29□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Gm3264L7N2C5 238 aa13.29□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Fgd3O88842 733 aa13.29□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Klra1P20937 262 aa13.29□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Edem3Q2HXL6 931 aa13.29□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Q8BGN9 141 aa13.29□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Gpr180Q8BPS4 441 aa13.29□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Ero1aQ8R180 464 aa13.29□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Ndst4Q9EQW8 872 aa13.29□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Pds5aQ6A026 1332 aa13.29□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Vmn2r87E9PZX4 848 aa13.28□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Pip4k2aO70172 405 aa13.28□□□□□ -0.28
Ddx55-202ENSMUST00000111438 P01644 108 aa13.28□□□□□ -0.28
Ddx55-202ENSMUST00000111438 P01645 108 aa13.28□□□□□ -0.28
Ddx55-202ENSMUST00000111438 P01646 108 aa13.28□□□□□ -0.28
Ddx55-202ENSMUST00000111438 P01647 108 aa13.28□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Pcbp1P60335 356 aaKnown RBP13.28□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Nab2Q61127 525 aa13.28□□□□□ -0.28
Ddx55-202ENSMUST00000111438 FAM120AQ6A0A9 1112 aaKnown RBP13.28□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Celf4Q7TSY6 486 aa13.28□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Wdr3Q8BHB4 942 aaKnown RBP13.28□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Ccdc169Q8BXX9 214 aa13.28□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Q8C5C9 218 aa13.28□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Matr3Q8K310 846 aaKnown RBP13.28□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Bud13Q8R149 637 aa13.28□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Usp29Q9ES63 869 aa13.28□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Asah2Q9JHE3 756 aa13.28□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Dnajb2Q9QYI5 324 aa13.28□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Arf4P61750 180 aa13.28□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Tbx3P70324 741 aa13.28□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Cct6aP80317 531 aaKnown RBP13.28□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Asprv1Q09PK2 339 aa13.28□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Gm11487Q5RIS0 354 aa13.28□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Krt31Q61765 416 aa13.28□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Spag5Q7TME2 1165 aa13.28□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Cracr2bQ80ZJ8 394 aa13.28□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Ago2Q8CJG0 860 aaKnown RBP13.28□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Znf467Q8JZL0 594 aa13.28□□□□□ -0.28
Ddx55-202ENSMUST00000111438 PrameQ9D4Z5 464 aa13.28□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Ftsj3Q9DBE9 838 aaKnown RBP13.28□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Rab27aQ9ERI2 221 aa13.28□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Myo1cQ9WTI7 1063 aa13.28□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Slc12a7Q9WVL3 1083 aa13.28□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Igkv10-96A0A140T8M1 115 aa13.27□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Slc16a6B1AT66 607 aa13.27□□□□□ -0.28
Ddx55-202ENSMUST00000111438 AgtP11859 477 aa13.27□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Gnrh1P13562 90 aa13.27□□□□□ -0.28
Ddx55-202ENSMUST00000111438 SarsP26638 512 aaKnown RBP13.27□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Mmp3P28862 477 aa13.27□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Hps5P59438 1126 aa13.27□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Mfsd14aP70187 490 aa13.27□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Fam198aQ3UY90 562 aa13.27□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Ankfy1Q810B6 1169 aa13.27□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Rapgef5Q8C0Q9 814 aa13.27□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Tdrd7Q8K1H1 1086 aaKnown RBP13.27□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Ppp1r3aQ99MR9 1089 aa13.27□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 86.6 ms