RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Brd9Q3UQU0 596 aaKnown RBP13.86□□□□□ -0.19
Nup88-203ENSMUST00000108531 Q3UTZ3 580 aa13.86□□□□□ -0.19
Nup88-203ENSMUST00000108531 Sfi1Q3UZY0 1216 aaKnown RBP13.86□□□□□ -0.19
Nup88-203ENSMUST00000108531 Ccdc125Q5U465 500 aa13.86□□□□□ -0.19
Nup88-203ENSMUST00000108531 Krt12Q64291 487 aa13.86□□□□□ -0.19
Nup88-203ENSMUST00000108531 Styk1Q6J9G1 429 aa13.86□□□□□ -0.19
Nup88-203ENSMUST00000108531 Bpifb9aQ80XI7 591 aa13.86□□□□□ -0.19
Nup88-203ENSMUST00000108531 Tmem117Q8BH18 514 aa13.86□□□□□ -0.19
Nup88-203ENSMUST00000108531 Mageb18Q8BQR7 327 aa13.86□□□□□ -0.19
Nup88-203ENSMUST00000108531 MypopQ8R4U1 393 aa13.86□□□□□ -0.19
Nup88-203ENSMUST00000108531 Gpsm2Q8VDU0 679 aa13.86□□□□□ -0.19
Nup88-203ENSMUST00000108531 Krt17Q9QWL7 433 aa13.86□□□□□ -0.19
Nup88-203ENSMUST00000108531 Extl3Q9WVL6 918 aa13.86□□□□□ -0.19
Nup88-203ENSMUST00000108531 Tph1P17532 447 aa13.86□□□□□ -0.19
Nup88-203ENSMUST00000108531 Xrcc5P27641 732 aa13.86□□□□□ -0.19
Nup88-203ENSMUST00000108531 rp9P97762 213 aa13.86□□□□□ -0.19
Nup88-203ENSMUST00000108531 Abl2Q4JIM5 1182 aa13.86□□□□□ -0.19
Nup88-203ENSMUST00000108531 Msl1Q6PDM1 616 aa13.86□□□□□ -0.19
Nup88-203ENSMUST00000108531 Uts2bQ765I1 113 aa13.86□□□□□ -0.19
Nup88-203ENSMUST00000108531 PicalmQ7M6Y3 660 aaKnown RBP13.86□□□□□ -0.19
Nup88-203ENSMUST00000108531 Fbxo10Q7TQF2 950 aa13.86□□□□□ -0.19
Nup88-203ENSMUST00000108531 Daam2Q80U19 1115 aa13.86□□□□□ -0.19
Nup88-203ENSMUST00000108531 Bank1Q80VH0 783 aa13.86□□□□□ -0.19
Nup88-203ENSMUST00000108531 Tmem120aQ8C1E7 343 aa13.86□□□□□ -0.19
Nup88-203ENSMUST00000108531 Pls3Q99K51 630 aa13.86□□□□□ -0.19
Nup88-203ENSMUST00000108531 Lman1Q9D0F3 517 aa13.86□□□□□ -0.19
Nup88-203ENSMUST00000108531 Sdr42e1Q9D665 394 aa13.86□□□□□ -0.19
Nup88-203ENSMUST00000108531 Nop56Q9D6Z1 580 aaKnown RBP13.86□□□□□ -0.19
Nup88-203ENSMUST00000108531 Adam22Q9R1V6 904 aa13.86□□□□□ -0.19
Nup88-203ENSMUST00000108531 Rasgrp1Q9Z1S3 795 aa13.86□□□□□ -0.19
Nup88-203ENSMUST00000108531 Myo1eE9Q634 1107 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 Ppp1r9aH3BJD6 1292 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 Nrg3O35181 713 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 Prl6a1O35257 230 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 IvlP48997 467 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 Hoxc13P50207 328 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 Npr3P70180 536 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 LxnP70202 222 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 Taok1Q5F2E8 1001 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 Slc10a5Q5PT54 434 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 Ugt1a9Q62452 528 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 Zcchc2Q69ZB8 1166 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 Enoph1Q8BGB7 257 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 Hook3Q8BUK6 718 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 Rint1Q8BZ36 792 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 Rtp1Q8C8C1 263 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 Plekhg6Q8R0J1 787 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 CactinQ9CS00 772 aaKnown RBP13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 Tgm5Q9D7I9 724 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 Myh11O08638 1972 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 Gm28360A0A087WR25 190 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 Gm5936A2BG95 728 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 Apol8A2VDH7 339 aaKnown RBP13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 Gm5640A3KG49 728 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 Vmn2r63E9Q0K5 859 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 Gm9268E9Q0M3 861 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 Vmn2r62K7N712 859 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 Dnajb6O54946 365 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 CnpP16330 420 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 Ces1cP23953 554 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 NppbP40753 121 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 Cdc25cP48967 447 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 Ptprn2P80560 1001 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 Wdr41Q3UDP0 460 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 Bpifb5Q3UQ05 490 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 D630036H23RikQ3UQD6 204 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 Drc1Q3USS3 753 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 FancbQ5XJY6 703 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 Tfe3Q64092 572 aaKnown RBP13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 Kctd6Q8BNL5 237 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 Spire2Q8K1S6 718 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 Dppa3Q8QZY3 150 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 SncbQ91ZZ3 133 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 Pagr1aQ99L02 253 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 Mettl16Q9CQG2 553 aaKnown RBP13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 Borcs6Q9D6W8 360 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 Rnf6Q9DBU5 667 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 Dgcr8Q9EQM6 773 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 Capn12Q9ER56 720 aa13.85□□□□□ -0.19
Nup88-203ENSMUST00000108531 Cyb5rlB1AS42 316 aa13.84□□□□□ -0.19
Nup88-203ENSMUST00000108531 Gpr161B2RPY5 545 aa13.84□□□□□ -0.19
Nup88-203ENSMUST00000108531 Unc13dB2RUP2 1085 aa13.84□□□□□ -0.19
Nup88-203ENSMUST00000108531 4933406M09RikG3XA12 479 aa13.84□□□□□ -0.19
Nup88-203ENSMUST00000108531 Casp14O89094 257 aa13.84□□□□□ -0.19
Nup88-203ENSMUST00000108531 Map2k1P31938 393 aa13.84□□□□□ -0.19
Nup88-203ENSMUST00000108531 Syt2P46097 422 aa13.84□□□□□ -0.19
Nup88-203ENSMUST00000108531 Adcy7P51829 1099 aa13.84□□□□□ -0.19
Nup88-203ENSMUST00000108531 Erbb2P70424 1256 aa13.84□□□□□ -0.19
Nup88-203ENSMUST00000108531 Lmntd2Q0VET5 664 aa13.84□□□□□ -0.19
Nup88-203ENSMUST00000108531 Rhox12Q4TU81 186 aa13.84□□□□□ -0.19
Nup88-203ENSMUST00000108531 Ppp1r13bQ62415 1087 aa13.84□□□□□ -0.19
Nup88-203ENSMUST00000108531 Rhbdf2Q80WQ6 827 aa13.84□□□□□ -0.19
Nup88-203ENSMUST00000108531 C2cd2lQ80X80 706 aa13.84□□□□□ -0.19
Nup88-203ENSMUST00000108531 Fbxl5Q8C2S5 690 aa13.84□□□□□ -0.19
Nup88-203ENSMUST00000108531 Tti1Q91V83 1085 aa13.84□□□□□ -0.19
Nup88-203ENSMUST00000108531 Sf3a3Q9D554 501 aaKnown RBP13.84□□□□□ -0.19
Nup88-203ENSMUST00000108531 Ccdc182Q9D9C6 152 aa13.84□□□□□ -0.19
Nup88-203ENSMUST00000108531 Nudt12Q9DCN1 462 aa13.84□□□□□ -0.19
Nup88-203ENSMUST00000108531 Tmem174Q9DCX7 243 aa13.84□□□□□ -0.19
Nup88-203ENSMUST00000108531 Smok2bQ9QYZ3 484 aa13.84□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 34.5 ms