RNA–Protein interactions for RNA: ENSMUST00000103220.3

Snrnp200-201, Transcript of U5 small nuclear ribonucleoprotein 200 kDa helicase, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Snrnp200, Length 6,745 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp200-201ENSMUST00000103220 Ercc6l2Q9JIM3 1537 aa9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Rhox3fA2ANE1 215 aa9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Casq2O09161 415 aa9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Lrch1P62046 709 aa9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Pcsk1P63239 753 aa9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Kcnk18Q6VV64 394 aa9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Pcdhb7Q8CDY9 829 aa9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Ago2Q8CJG0 860 aaKnown RBP9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Usp15Q8R5H1 981 aa9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 1700129C05RikQ9CQ77 218 aa9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Ppp1r12aQ9DBR7 1029 aaKnown RBP9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Orc1Q9Z1N2 840 aaKnown RBP9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 A0A1Y7VP24 259 aa9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Cdc27A2A6Q5 825 aa9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 HunkO88866 714 aa9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Cdc25aP48964 514 aa9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 SftpbP50405 377 aa9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Setd4P58467 439 aa9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Hipk4Q3V016 616 aa9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Them6Q80ZW2 207 aa9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 SgczQ8BX51 311 aa9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Nde1Q9CZA6 344 aa9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Dcun1d1Q9QZ73 259 aa9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Zfp266E9Q2S7 604 aa9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Gm3371F7CQW8 167 aa9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Psd3Q2PFD7 1037 aa9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Peg10Q7TN75 958 aaKnown RBP9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Trim36Q80WG7 729 aa9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Znf598Q80YR4 908 aaKnown RBP9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 F13a1Q8BH61 732 aa9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 CenpuQ8C4M7 410 aa9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Tasp1Q8R1G1 420 aa9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Lsm7Q9CQQ8 103 aaKnown RBP9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Erbb3Q61526 1339 aa9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Brpf3B2KF05 1204 aaKnown RBP9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Pdzrn4E9PUZ9 1014 aa9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Serpinb3aG3X9V8 387 aa9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 BhmtO35490 407 aaKnown RBP9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Trim43aQ3TL54 445 aa9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Pde1aQ61481 565 aa9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Zfp418Q8BFS8 652 aa9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Phactr3Q8BYK5 558 aa9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Ttc33Q9D6K7 262 aa9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Vstm4T1NXB5 319 aa9.53□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Prl3b1P09586 222 aa9.52□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Vps4bP46467 444 aaKnown RBP9.52□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Serpinb6Q60854 378 aa9.52□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Ddx42Q810A7 929 aaKnown RBP9.52□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Paip2bQ91W45 136 aa9.52□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Ap2b1Q9DBG3 937 aa9.52□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Pdcd7Q9WTY1 482 aa9.52□□□□□ -0.88
Snrnp200-201ENSMUST00000103220 Tcof1O08784 1320 aaKnown RBP9.52□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Gm8879F6R3J9 157 aa9.52□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Vamp7P70280 220 aa9.52□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Ddx5Q61656 614 aaKnown RBP9.52□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Ino80dQ66JY2 873 aaKnown RBP9.52□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Polr2eQ80UW8 210 aaKnown RBP9.52□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Dkc1Q9ESX5 509 aaKnown RBP9.52□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Slc25a13Q9QXX4 676 aa9.52□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Celf2Q9Z0H4 508 aaKnown RBP9.52□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Atp6v0a1Q9Z1G4 839 aaKnown RBP9.52□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Soat2O88908 525 aa9.52□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Cav1P49817 178 aa9.52□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 PrkcbP68404 671 aa9.52□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Myo1dQ5SYD0 1006 aa9.52□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Snx17Q8BVL3 470 aa9.52□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Ctnnal1O88327 731 aa9.52□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Kcna1P16388 495 aa9.52□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Snip1Q8BIZ6 383 aaKnown RBP9.52□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Ptrh1Q8BW00 204 aa9.52□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 H6pdQ8CFX1 789 aa9.52□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Cyp2c50Q91X77 490 aa9.52□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Gimap4Q99JY3 219 aa9.52□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Cnbd2Q9D5U8 673 aa9.52□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Mrps9Q9D7N3 390 aaKnown RBP9.52□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Fthl17aQ9DAX0 182 aa9.52□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Rpn2Q9DBG6 631 aaKnown RBP9.52□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Eif4enif1Q9EST3 983 aaKnown RBP9.52□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Apobec2Q9WV35 224 aa9.52□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Cog1Q9Z160 980 aa9.52□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Atp10bB1AWN4 1474 aa9.52□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Olfm3P63056 478 aa9.52□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Smcr8Q3UMB5 935 aa9.52□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Fam102aQ78T81 392 aa9.52□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Tmem132cQ8CEF9 1099 aa9.52□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 GhdcQ99J23 532 aa9.52□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 MrgbpQ9DAT2 204 aa9.52□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Shcbp1Q9Z179 668 aa9.52□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Tcp11x2A2AEI7 503 aa9.51□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Ces1bD3Z5G7 567 aa9.51□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 2610008E11RikG3X964 669 aa9.51□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Gnat1P20612 350 aa9.51□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Nr5a1P33242 462 aa9.51□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Lsg1Q3UM18 644 aaKnown RBP9.51□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Usp50Q6P8X6 390 aa9.51□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Heatr3Q8BQM4 679 aa9.51□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Kbtbd4Q8R179 534 aa9.51□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Scrn2Q8VCA8 425 aa9.51□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 YwhabQ9CQV8 246 aaKnown RBP9.51□□□□□ -0.89
Snrnp200-201ENSMUST00000103220 Vps33aQ9D2N9 598 aa9.51□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms