RNA–Protein interactions for RNA: ENSMUST00000098814.10

Lig1-201, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-201ENSMUST00000098814 Cntnap2Q9CPW0 1332 aa13.04□□□□□ -0.32
Lig1-201ENSMUST00000098814 Kcnk16G5E845 292 aa13.04□□□□□ -0.32
Lig1-201ENSMUST00000098814 Ebf2O08792 575 aa13.04□□□□□ -0.32
Lig1-201ENSMUST00000098814 Slc3a2P10852 526 aaKnown RBP13.04□□□□□ -0.32
Lig1-201ENSMUST00000098814 Calb1P12658 261 aa13.04□□□□□ -0.32
Lig1-201ENSMUST00000098814 RcvrnP34057 202 aa13.04□□□□□ -0.32
Lig1-201ENSMUST00000098814 CcnjlQ5SRT8 387 aa13.04□□□□□ -0.32
Lig1-201ENSMUST00000098814 Rapgef5Q8C0Q9 814 aa13.04□□□□□ -0.32
Lig1-201ENSMUST00000098814 Lrrc14Q8VC16 493 aa13.04□□□□□ -0.32
Lig1-201ENSMUST00000098814 NcaldQ91X97 193 aa13.04□□□□□ -0.32
Lig1-201ENSMUST00000098814 Slc25a38Q91XD8 326 aa13.04□□□□□ -0.32
Lig1-201ENSMUST00000098814 Pcdhgb4Q91XX6 912 aa13.04□□□□□ -0.32
Lig1-201ENSMUST00000098814 Serpina9Q9D7D2 418 aa13.04□□□□□ -0.32
Lig1-201ENSMUST00000098814 Eid1Q9DCR4 169 aa13.04□□□□□ -0.32
Lig1-201ENSMUST00000098814 Slc15a2Q9ES07 729 aa13.04□□□□□ -0.32
Lig1-201ENSMUST00000098814 Rfwd2Q9R1A8 733 aaKnown RBP13.04□□□□□ -0.32
Lig1-201ENSMUST00000098814 Klrc2Q9WTJ9 238 aa13.04□□□□□ -0.32
Lig1-201ENSMUST00000098814 SynrgQ5SV85 1306 aa13.03□□□□□ -0.32
Lig1-201ENSMUST00000098814 Ephb2P54763 986 aa13.03□□□□□ -0.32
Lig1-201ENSMUST00000098814 Creb1Q01147 341 aaKnown RBP13.03□□□□□ -0.32
Lig1-201ENSMUST00000098814 Dok7Q18PE0 504 aa13.03□□□□□ -0.32
Lig1-201ENSMUST00000098814 Bpifb5Q3UQ05 490 aa13.03□□□□□ -0.32
Lig1-201ENSMUST00000098814 Nlrp4fQ66X05 959 aa13.03□□□□□ -0.32
Lig1-201ENSMUST00000098814 Zswim5Q80TC6 1188 aa13.03□□□□□ -0.32
Lig1-201ENSMUST00000098814 Ddx42Q810A7 929 aaKnown RBP13.03□□□□□ -0.32
Lig1-201ENSMUST00000098814 C130026I21RikQ8C898 291 aa13.03□□□□□ -0.32
Lig1-201ENSMUST00000098814 Kat5Q8CHK4 513 aa13.03□□□□□ -0.32
Lig1-201ENSMUST00000098814 Ints9Q8K114 658 aaKnown RBP13.03□□□□□ -0.32
Lig1-201ENSMUST00000098814 Ero1aQ8R180 464 aa13.03□□□□□ -0.32
Lig1-201ENSMUST00000098814 Atxn7Q8R4I1 867 aa13.03□□□□□ -0.32
Lig1-201ENSMUST00000098814 Cdk9Q99J95 372 aa13.03□□□□□ -0.32
Lig1-201ENSMUST00000098814 Nudt12Q9DCN1 462 aa13.03□□□□□ -0.32
Lig1-201ENSMUST00000098814 Tlr5Q9JLF7 859 aa13.03□□□□□ -0.32
Lig1-201ENSMUST00000098814 Col2a1P28481 1487 aa13.03□□□□□ -0.32
Lig1-201ENSMUST00000098814 Got1P05201 413 aa13.03□□□□□ -0.32
Lig1-201ENSMUST00000098814 Akr1b8P45377 316 aa13.03□□□□□ -0.32
Lig1-201ENSMUST00000098814 Sash1P59808 1230 aa13.03□□□□□ -0.32
Lig1-201ENSMUST00000098814 CrkQ64010 304 aa13.03□□□□□ -0.32
Lig1-201ENSMUST00000098814 Phc1Q64028 1012 aa13.03□□□□□ -0.32
Lig1-201ENSMUST00000098814 PrimpolQ6P1E7 537 aa13.03□□□□□ -0.32
Lig1-201ENSMUST00000098814 Ints8Q80V86 995 aa13.03□□□□□ -0.32
Lig1-201ENSMUST00000098814 SpidrQ8BGX7 933 aa13.03□□□□□ -0.32
Lig1-201ENSMUST00000098814 Yars2Q8BYL4 472 aaKnown RBP13.03□□□□□ -0.32
Lig1-201ENSMUST00000098814 Calhm6Q8C9E8 313 aa13.03□□□□□ -0.32
Lig1-201ENSMUST00000098814 Sugp2Q8CH09 1067 aa13.03□□□□□ -0.32
Lig1-201ENSMUST00000098814 D630039A03RikQ8K0M7 236 aa13.03□□□□□ -0.32
Lig1-201ENSMUST00000098814 Rell1Q8K2J7 272 aa13.03□□□□□ -0.32
Lig1-201ENSMUST00000098814 HibchQ8QZS1 385 aa13.03□□□□□ -0.32
Lig1-201ENSMUST00000098814 Slc12a8Q8VI23 705 aa13.03□□□□□ -0.32
Lig1-201ENSMUST00000098814 Ubiad1Q9DC60 336 aa13.03□□□□□ -0.32
Lig1-201ENSMUST00000098814 Krt17Q9QWL7 433 aa13.03□□□□□ -0.32
Lig1-201ENSMUST00000098814 Rnf103Q9R1W3 683 aa13.03□□□□□ -0.32
Lig1-201ENSMUST00000098814 Kmt2eQ3UG20 1868 aa13.03□□□□□ -0.32
Lig1-201ENSMUST00000098814 Gpr161B2RPY5 545 aa13.02□□□□□ -0.32
Lig1-201ENSMUST00000098814 Mgat1P27808 447 aa13.02□□□□□ -0.32
Lig1-201ENSMUST00000098814 Pik3caP42337 1068 aa13.02□□□□□ -0.32
Lig1-201ENSMUST00000098814 Frg1P97376 258 aaKnown RBP13.02□□□□□ -0.32
Lig1-201ENSMUST00000098814 Ccdc138Q0VF22 680 aa13.02□□□□□ -0.32
Lig1-201ENSMUST00000098814 Tmem120bQ3TA38 339 aa13.02□□□□□ -0.32
Lig1-201ENSMUST00000098814 Msantd2Q6NZR2 559 aa13.02□□□□□ -0.32
Lig1-201ENSMUST00000098814 Slc26a6Q8CIW6 758 aa13.02□□□□□ -0.32
Lig1-201ENSMUST00000098814 Spire2Q8K1S6 718 aa13.02□□□□□ -0.32
Lig1-201ENSMUST00000098814 Gpsm2Q8VDU0 679 aa13.02□□□□□ -0.32
Lig1-201ENSMUST00000098814 Spdl1Q923A2 608 aa13.02□□□□□ -0.32
Lig1-201ENSMUST00000098814 Golga1Q9CW79 758 aa13.02□□□□□ -0.32
Lig1-201ENSMUST00000098814 Tmed5Q9CXE7 229 aa13.02□□□□□ -0.32
Lig1-201ENSMUST00000098814 Ccdc124Q9D8X2 217 aaKnown RBP13.02□□□□□ -0.32
Lig1-201ENSMUST00000098814 Q9DA42 136 aa13.02□□□□□ -0.32
Lig1-201ENSMUST00000098814 Ptf1aQ9QX98 324 aa13.02□□□□□ -0.32
Lig1-201ENSMUST00000098814 IvlP48997 467 aa13.02□□□□□ -0.33
Lig1-201ENSMUST00000098814 Lrch1P62046 709 aa13.02□□□□□ -0.33
Lig1-201ENSMUST00000098814 Cyp11b1Q3TG86 501 aa13.02□□□□□ -0.33
Lig1-201ENSMUST00000098814 Ppp1r13bQ62415 1087 aa13.02□□□□□ -0.33
Lig1-201ENSMUST00000098814 SpopQ6ZWS8 374 aa13.02□□□□□ -0.33
Lig1-201ENSMUST00000098814 Ccdc50Q810U5 305 aaKnown RBP13.02□□□□□ -0.33
Lig1-201ENSMUST00000098814 Trim65Q8BFW4 522 aa13.02□□□□□ -0.33
Lig1-201ENSMUST00000098814 Actl9Q8CG27 415 aa13.02□□□□□ -0.33
Lig1-201ENSMUST00000098814 Prl2b1Q9DAZ2 228 aa13.02□□□□□ -0.33
Lig1-201ENSMUST00000098814 Extl2Q9ES89 330 aa13.02□□□□□ -0.33
Lig1-201ENSMUST00000098814 Gtf2ird1Q9JI57 1104 aaKnown RBP13.02□□□□□ -0.33
Lig1-201ENSMUST00000098814 Rasgrp1Q9Z1S3 795 aa13.02□□□□□ -0.33
Lig1-201ENSMUST00000098814 Gm38392E9Q2A2 434 aa13.02□□□□□ -0.33
Lig1-201ENSMUST00000098814 Srsf11E9Q6E5 511 aaKnown RBP13.02□□□□□ -0.33
Lig1-201ENSMUST00000098814 Gas7Q60780 421 aa13.02□□□□□ -0.33
Lig1-201ENSMUST00000098814 Sh3d21Q7TSG5 549 aa13.02□□□□□ -0.33
Lig1-201ENSMUST00000098814 Rhbdf2Q80WQ6 827 aa13.02□□□□□ -0.33
Lig1-201ENSMUST00000098814 Slc17a8Q8BFU8 601 aa13.02□□□□□ -0.33
Lig1-201ENSMUST00000098814 Slc26a7Q8R2Z3 656 aa13.02□□□□□ -0.33
Lig1-201ENSMUST00000098814 Nmrk1Q91W63 195 aa13.02□□□□□ -0.33
Lig1-201ENSMUST00000098814 Gpihbp1Q9D1N2 228 aa13.02□□□□□ -0.33
Lig1-201ENSMUST00000098814 Mipol1Q9D9F8 279 aa13.02□□□□□ -0.33
Lig1-201ENSMUST00000098814 Tex13c2A0A0G2JGA3 530 aa13.01□□□□□ -0.33
Lig1-201ENSMUST00000098814 Flvcr1B2RXV4 560 aa13.01□□□□□ -0.33
Lig1-201ENSMUST00000098814 Myo1eE9Q634 1107 aa13.01□□□□□ -0.33
Lig1-201ENSMUST00000098814 Lrrc10bG3XA50 292 aa13.01□□□□□ -0.33
Lig1-201ENSMUST00000098814 Ctnnal1O88327 731 aa13.01□□□□□ -0.33
Lig1-201ENSMUST00000098814 Cyp11b2P15539 500 aa13.01□□□□□ -0.33
Lig1-201ENSMUST00000098814 Ntrk3Q6VNS1 825 aa13.01□□□□□ -0.33
Lig1-201ENSMUST00000098814 Peg10Q7TN75 958 aaKnown RBP13.01□□□□□ -0.33
Lig1-201ENSMUST00000098814 Btnl9Q8BJE2 536 aa13.01□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 38.2 ms