RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Btbd18A0A0A6YY25 723 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Ptk2P34152 1090 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 DeptorQ570Y9 409 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Glg1Q61543 1175 aaKnown RBP10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Plk4Q64702 925 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Gcfc2Q8BKT3 769 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Dctn2Q99KJ8 402 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Golph3Q9CRA5 298 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Nt5c3aQ9D020 331 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Polr3cQ9D483 533 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Cse1lQ9ERK4 971 aaKnown RBP10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Krt16Q9Z2K1 469 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Ppp1r13lQ5I1X5 824 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Cnot7Q60809 285 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Ano8Q6PB70 1060 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Dnph1Q80VJ3 173 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Znf598Q80YR4 908 aaKnown RBP10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Cyp2d12Q8BVD2 504 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Ccdc90bQ8C3X2 256 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 PlvapQ91VC4 438 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Pomgnt1Q91X88 660 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 NelfcdQ922L6 591 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 St5Q924W7 1134 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Kif19Q99PT9 997 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Fam84aQ9D650 292 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Gm4871D3Z0W7 314 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Fgd3O88842 733 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Ezh1P70351 747 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Coq7P97478 217 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Ces3aQ63880 571 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 SugctQ7TNE1 436 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Fbxo11Q7TPD1 930 aaKnown RBP10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Abcf3Q8K268 709 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Ppp4r1Q8K2V1 951 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Ces3bQ8VCU1 571 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Dnajc9Q91WN1 259 aaKnown RBP10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 ChiaQ91XA9 473 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Pcdhb12Q91Y07 789 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Rnf112Q96DY5 654 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Trpd52l3Q9CQ14 231 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Ppp2r3cQ9JK24 453 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Plekhg2Q6KAU7 1340 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Fbxl16A2RT62 479 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Klra1P20937 262 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Pkn1P70268 946 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Pla2g4cQ64GA5 597 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Q80ZQ3 298 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Scfd2Q8BTY8 684 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Senp2Q91ZX6 588 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Gdap2Q9DBL2 498 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Anapc7Q9WVM3 565 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Atp6v1c1Q9Z1G3 382 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 GakQ99KY4 1305 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 ZfrO88532 1074 aaKnown RBP10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 InaP46660 501 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Sash1P59808 1230 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Ripply1Q2WG77 201 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Nme8Q715T0 586 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Wdr27Q8C5V5 780 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 CopaQ8CIE6 1224 aaKnown RBP10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Capn7Q9R1S8 813 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Col15a1O35206 1367 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 CpdO89001 1377 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 RereQ80TZ9 1558 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Usp54Q8BL06 1588 aaKnown RBP10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 March10E9PX79 788 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Ifnb1P01575 182 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Krt10P02535 570 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Serpina1aP07758 413 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Rps6ka3P18654 740 aaKnown RBP10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 InscQ3HNM7 579 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Pitpnm3Q3UHE1 974 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Fam160a1Q505K2 1081 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 RasefQ5RI75 627 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 AlcamQ61490 583 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Msl1Q6PDM1 616 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Ssxb5Q6XAS2 159 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Yars2Q8BYL4 472 aaKnown RBP10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Svs3bQ8BZH8 265 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Dennd2aQ8C4S8 1000 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Kcnv2Q8CFS6 562 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 PdxkQ8K183 312 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Tpd52l2Q9CYZ2 220 aaKnown RBP10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 PigbQ9JJQ0 542 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Rasgrp1Q9Z1S3 795 aa10.84□□□□□ -0.67
Lig4-201ENSMUST00000095476 Copb2O55029 905 aa10.83□□□□□ -0.68
Lig4-201ENSMUST00000095476 Eno3P21550 434 aa10.83□□□□□ -0.68
Lig4-201ENSMUST00000095476 Setd4P58467 439 aa10.83□□□□□ -0.68
Lig4-201ENSMUST00000095476 Serping1P97290 504 aa10.83□□□□□ -0.68
Lig4-201ENSMUST00000095476 Patl1Q3TC46 770 aaKnown RBP10.83□□□□□ -0.68
Lig4-201ENSMUST00000095476 Sp4Q62445 782 aa10.83□□□□□ -0.68
Lig4-201ENSMUST00000095476 Sh3tc2Q80VA5 1289 aa10.83□□□□□ -0.68
Lig4-201ENSMUST00000095476 Tmtc4Q8BG19 741 aa10.83□□□□□ -0.68
Lig4-201ENSMUST00000095476 Slc4a9E9PUP3 929 aa10.83□□□□□ -0.68
Lig4-201ENSMUST00000095476 Galnt4O08832 578 aa10.83□□□□□ -0.68
Lig4-201ENSMUST00000095476 Ftl1P29391 183 aa10.83□□□□□ -0.68
Lig4-201ENSMUST00000095476 Sept1P42209 366 aa10.83□□□□□ -0.68
Lig4-201ENSMUST00000095476 Stxbp3Q60770 592 aa10.83□□□□□ -0.68
Lig4-201ENSMUST00000095476 Wbp4Q61048 376 aa10.83□□□□□ -0.68
Lig4-201ENSMUST00000095476 Ddx55Q6ZPL9 600 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 19.1 ms