RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Tmem119Q8R138 280 aa9.52□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Slc9a8Q8R4D1 576 aa9.52□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Ttc39cQ8VE09 580 aa9.52□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Acot11Q8VHQ9 594 aa9.52□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Kdm8Q9CXT6 414 aa9.52□□□□□ -0.89
Clcn3-202ENSMUST00000056508 NarfQ9CYQ7 462 aa9.52□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Slc39a1Q9QZ03 324 aa9.52□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Sall3Q62255 1320 aa9.52□□□□□ -0.89
Clcn3-202ENSMUST00000056508 PotegA5H0M4 473 aa9.52□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Cyp26c1B2RXA7 518 aa9.52□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Olfr414E9Q5P8 317 aa9.52□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Fgfr2P21803 821 aa9.52□□□□□ -0.89
Clcn3-202ENSMUST00000056508 EvcP57680 1005 aa9.52□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Cnpy1Q4VAB4 94 aa9.52□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Olfr808Q8VGI8 312 aa9.52□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Pfdn1Q9CWM4 122 aa9.52□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Ilf2Q9CXY6 390 aaKnown RBP9.52□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Mtmr2Q9Z2D1 643 aa9.52□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Krt2Q3TTY5 707 aa9.52□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Nr1d1Q3UV55 615 aa9.52□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Rnf207Q3V3A7 635 aa9.52□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Ppm1nQ8BGL1 404 aa9.52□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Cnppd1Q8K158 407 aa9.52□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Fcho1Q8K285 873 aa9.52□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Aldh7a1Q9DBF1 539 aa9.52□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Palm3A2TJV2 734 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Mms22lB1AUR6 1238 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Atf2P16951 487 aaKnown RBP9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Snrpa1P57784 255 aaKnown RBP9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Eya3P97480 510 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Xxylt1Q3U4G3 392 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Gstt1Q64471 240 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Actn1Q7TPR4 892 aaKnown RBP9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Sult2a8Q8BGL3 282 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Depdc1bQ8BH88 529 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 R3hcc1lQ8BJM3 775 aaKnown RBP9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 TrhdeQ8K093 1025 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Slc12a5Q91V14 1138 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Zfp810Q99K45 461 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Zcchc6Q5BLK4 1491 aaKnown RBP9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Itga8A2ARA8 1062 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Tex28B1AYN9 409 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Zfp266E9Q2S7 604 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 IapP03975 557 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Krt8P11679 490 aaKnown RBP9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Alox12eP55249 662 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Nrg2P56974 756 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Slc7a1Q09143 622 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Emc10Q3TAS6 258 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Maip1Q8BHE8 291 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Nceh1Q8BLF1 408 aaKnown RBP9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Gm10600Q8BQ57 223 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Irak2Q8CFA1 622 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Caap1Q8VDY9 356 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 NelfcdQ922L6 591 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Ddx47Q9CWX9 455 aaKnown RBP9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Tbc1d21Q9D9D3 336 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Tpd52l1O54818 204 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 PtprcP06800 1291 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Akt1P31750 480 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Runx2Q08775 607 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Dmc1Q61880 340 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Tex13c3Q810P0 219 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Serpina3bQ8BYY9 420 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Naa30Q8CES0 364 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Abcf3Q8K268 709 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Appl2Q8K3G9 662 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Pcdhb3Q91XZ7 784 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Wdr55Q9CX97 388 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 EqtnQ9D9V2 337 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Prr16A3KMN5 304 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Rgsl1H3BL40 1073 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Vwa3bJ9JI28 736 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Pik3cdO35904 1043 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Tlk2O55047 718 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Matn4O89029 624 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Thoc7Q7TMY4 204 aaKnown RBP9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Tigd4Q8BUZ3 513 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Ndufs8Q8K3J1 212 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 TgdsQ8VDR7 355 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Clint1Q99KN9 631 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Pabpc6Q9D4E6 643 aaKnown RBP9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Capn15Q9JLG8 1095 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Gm10110D3Z5M2 615 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Nsmce4aG3XA30 381 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 SfnO70456 248 aaKnown RBP9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Itm2bO89051 266 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Gsta4P24472 222 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Gucy2eP52785 1108 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Slfn4Q3UV66 602 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Pabpc4Q6PHQ9 660 aaKnown RBP9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Kcns3Q8BQZ8 491 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Q8BTG6 205 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Pnpla8Q8K1N1 776 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Itm2cQ91VK4 269 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Pdia6Q922R8 440 aaKnown RBP9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 RetnlaQ9EP95 111 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Ube4bQ9ES00 1173 aa9.51□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Gm6657A0A1B0GRJ3 277 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Gm4302E9PX25 294 aa9.5□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 202.5 ms