RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Spint1Q9R097 507 aa9.43□□□□□ -0.9
Trim39-201ENSMUST00000042717 Mbtps1Q9WTZ2 1052 aa9.43□□□□□ -0.9
Trim39-201ENSMUST00000042717 Arih1Q9Z1K5 555 aa9.43□□□□□ -0.9
Trim39-201ENSMUST00000042717 Wdr72D3YYM4 1114 aa9.43□□□□□ -0.9
Trim39-201ENSMUST00000042717 Vmn2r87E9PZX4 848 aa9.43□□□□□ -0.9
Trim39-201ENSMUST00000042717 NfkbieO54910 364 aa9.43□□□□□ -0.9
Trim39-201ENSMUST00000042717 Rad23aP54726 363 aa9.43□□□□□ -0.9
Trim39-201ENSMUST00000042717 Krt86P97861 486 aa9.43□□□□□ -0.9
Trim39-201ENSMUST00000042717 Nfe2Q07279 373 aa9.43□□□□□ -0.9
Trim39-201ENSMUST00000042717 Icam5Q60625 917 aa9.43□□□□□ -0.9
Trim39-201ENSMUST00000042717 Cd37Q61470 281 aa9.43□□□□□ -0.9
Trim39-201ENSMUST00000042717 Six2Q62232 296 aa9.43□□□□□ -0.9
Trim39-201ENSMUST00000042717 PhkbQ7TSH2 1085 aa9.43□□□□□ -0.9
Trim39-201ENSMUST00000042717 Tbc1d10bQ8BHL3 798 aa9.43□□□□□ -0.9
Trim39-201ENSMUST00000042717 Sppl3Q9CUS9 384 aa9.43□□□□□ -0.9
Trim39-201ENSMUST00000042717 Grtp1Q9D3N8 359 aa9.43□□□□□ -0.9
Trim39-201ENSMUST00000042717 Rbm31yQ9D3U4 565 aa9.43□□□□□ -0.9
Trim39-201ENSMUST00000042717 Drap1Q9D6N5 205 aa9.43□□□□□ -0.9
Trim39-201ENSMUST00000042717 MsraQ9D6Y7 233 aa9.43□□□□□ -0.9
Trim39-201ENSMUST00000042717 Gm15262A0A140LIQ5 728 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 Serpinb3aG3X9V8 387 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 Scgb2b19J3QM75 112 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 Kcnu1O54982 1121 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 EpoP07321 192 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 IppP28575 584 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 Ndufs6P52503 116 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 Klra9Q2TJJ8 266 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 Fscn2Q32M02 492 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 Agxt2Q3UEG6 513 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 Nat8lQ3UGX3 299 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 PodnQ7TQ62 611 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 Acad11Q80XL6 779 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 6820408C15RikQ8BJX2 354 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 Nop9Q8BMC4 636 aaKnown RBP9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 Fam43aQ8BUP8 424 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 AdigQ8R400 80 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 Ankef1Q9D2J7 775 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 Fam187aQ9D3R5 417 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 4931423N10RikQ9D4J9 382 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 Tube1Q9D6T1 475 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 Sv2aQ9JIS5 742 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 Fut2Q9JL27 347 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 Gm9857F7CXR1 130 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 PtenO08586 403 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 Nck2O55033 380 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 RarbP22605 482 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 Mark3Q03141 753 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 Lrig2Q52KR2 1054 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 Tp53i13Q5F267 385 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 Zcchc2Q69ZB8 1166 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 Cep70Q6IQY5 616 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 Mbtd1Q6P5G3 631 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 Gemin4Q6P6L6 1058 aaKnown RBP9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 Gja6Q6S5G4 283 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 Slc13a4Q8BZ82 625 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 Phldb2Q8K1N2 1249 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 Rpp40Q8R1F9 363 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 Atp13a1Q9EPE9 1200 aaKnown RBP9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 Ms4a4aA0A087WRT7 236 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 Gcom1E9PZ54 550 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 PtprcP06800 1291 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 Slc3a2P10852 526 aaKnown RBP9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 Pth1rP41593 591 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 Gad1P48318 593 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 Znf865Q3U3I9 1058 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 MyzapQ3UIJ9 466 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 NntQ61941 1086 aaKnown RBP9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 HomezQ80W88 542 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 Gnl3Q8CI11 538 aaKnown RBP9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 Cd209bQ8CJ91 325 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 Vmn1r203Q8R273 311 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 Leng1Q9DB98 261 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 Slc15a2Q9ES07 729 aa9.42□□□□□ -0.9
Trim39-201ENSMUST00000042717 NcapgE9PWG6 1004 aa9.41□□□□□ -0.9
Trim39-201ENSMUST00000042717 Vmn2r15L7N2A0 855 aa9.41□□□□□ -0.9
Trim39-201ENSMUST00000042717 Gna15P30678 374 aa9.41□□□□□ -0.9
Trim39-201ENSMUST00000042717 Ifnar1P33896 590 aa9.41□□□□□ -0.9
Trim39-201ENSMUST00000042717 Scarf2P59222 833 aa9.41□□□□□ -0.9
Trim39-201ENSMUST00000042717 Serpina1eQ00898 413 aa9.41□□□□□ -0.9
Trim39-201ENSMUST00000042717 Palb2Q3U0P1 1104 aa9.41□□□□□ -0.9
Trim39-201ENSMUST00000042717 Muc3aQ3U5A2 218 aa9.41□□□□□ -0.9
Trim39-201ENSMUST00000042717 Znf507Q6ZPY5 941 aa9.41□□□□□ -0.9
Trim39-201ENSMUST00000042717 C2cd5Q7TPS5 1016 aaKnown RBP9.41□□□□□ -0.9
Trim39-201ENSMUST00000042717 RimklbQ80WS1 387 aa9.41□□□□□ -0.9
Trim39-201ENSMUST00000042717 Agbl2Q8CDK2 862 aa9.41□□□□□ -0.9
Trim39-201ENSMUST00000042717 Ccdc12Q8R344 166 aaKnown RBP9.41□□□□□ -0.9
Trim39-201ENSMUST00000042717 MesdQ9ERE7 224 aa9.41□□□□□ -0.9
Trim39-201ENSMUST00000042717 Cdc42ep4Q9JM96 349 aaKnown RBP9.41□□□□□ -0.9
Trim39-201ENSMUST00000042717 Klra17Q9JMA4 273 aa9.41□□□□□ -0.9
Trim39-201ENSMUST00000042717 Syt5Q9R0N5 386 aa9.41□□□□□ -0.9
Trim39-201ENSMUST00000042717 Rnf103Q9R1W3 683 aa9.41□□□□□ -0.9
Trim39-201ENSMUST00000042717 Psma7Q9Z2U0 248 aa9.41□□□□□ -0.9
Trim39-201ENSMUST00000042717 1700064H15RikD3Z4D4 81 aa9.41□□□□□ -0.9
Trim39-201ENSMUST00000042717 Gm3138K7N754 218 aa9.41□□□□□ -0.9
Trim39-201ENSMUST00000042717 Nr1i3O35627 358 aa9.41□□□□□ -0.9
Trim39-201ENSMUST00000042717 Tnnt2P50752 301 aa9.41□□□□□ -0.9
Trim39-201ENSMUST00000042717 Ccr5P51682 354 aa9.41□□□□□ -0.9
Trim39-201ENSMUST00000042717 SnrpfP62307 86 aaKnown RBP9.41□□□□□ -0.9
Trim39-201ENSMUST00000042717 Mfsd14aP70187 490 aa9.41□□□□□ -0.9
Trim39-201ENSMUST00000042717 CiitaP79621 1155 aa9.41□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 27.1 ms