RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Galnt5Q8C102 930 aa17.51■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Rbp7Q9EPC5 134 aa17.51■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Plod1Q9R0E2 728 aa17.51■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Fam160a1Q505K2 1081 aa17.5■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Dcun1d2Q8BZJ7 259 aa17.5■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Klhl41A2AUC9 606 aa17.5■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Stk11Q9WTK7 436 aa17.5■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Pum3Q8BKS9 647 aaKnown RBP17.5■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Gucy1b2Q8BXH3 824 aa17.5■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Lrrc59Q922Q8 307 aaKnown RBP17.5■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Adgrf5G5E8Q8 1348 aa17.5■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Gm21083A0A0G2JFD5 256 aa17.5■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Farp1F8VPU2 1048 aa17.5■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Map2k2Q63932 401 aa17.5■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 ClmnQ8C5W0 1052 aa17.5■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 BicralQ8CHH5 1074 aa17.5■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Rnf8Q8VC56 488 aa17.5■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Kif19Q99PT9 997 aa17.5■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Cox16Q9CR63 106 aa17.5■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 C87977A2A958 498 aa17.5■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Mageb2A2AHM0 380 aa17.5■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Trim75Q3UWZ0 467 aa17.5■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Btbd6Q8K2J9 488 aa17.5■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Pard6bQ9JK83 371 aa17.5■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Gm3127E9Q9P5 263 aa17.5■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Gm3453K7N724 263 aa17.5■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Gm3755K7N743 167 aa17.5■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Gm3187M0QWW3 260 aa17.5■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Tdrd7Q8K1H1 1086 aaKnown RBP17.5■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 UvragQ8K245 698 aa17.5■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Trim31Q8R0K2 507 aa17.5■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Pramef12Q9D2F1 463 aa17.5■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Akap14Q3V0I7 536 aa17.5■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Samhd1Q60710 627 aa17.5■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Fbxw7Q8VBV4 629 aa17.5■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Prpf6Q91YR7 941 aaKnown RBP17.5■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Sucla2Q9Z2I9 463 aa17.5■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Scnn1aQ61180 699 aa17.5■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Mcf2lQ64096 1149 aa17.5■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Arl8aQ8VEH3 186 aa17.5■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Snx24Q9CRB0 169 aa17.5■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Slc5a4aQ9ET37 656 aa17.5■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Krt17Q9QWL7 433 aa17.5■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Ankfn1A0A140LIW7 1083 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Csn1s1P19228 313 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Adgrg6Q6F3F9 1165 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Sgsm1Q8BPQ7 1093 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Pus7lQ8CE46 702 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Gm4871D3Z0W7 314 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Serpina3kP07759 418 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 PorP37040 678 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Faf2Q3TDN2 445 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Gpc5Q8CAL5 572 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Slain2Q8CI08 581 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Antxr1Q9CZ52 562 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Iqcf1Q9D9K8 182 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Atp11cQ9QZW0 1129 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Pacsin1Q61644 441 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Ano5Q75UR0 904 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Znf428Q8C1M2 176 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Myh14Q6URW6 2000 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Osbpl9A2A8Z1 736 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Ppef2O35385 757 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 ChrngP04760 519 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Cd22P35329 862 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Sipa1P46062 1037 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Ccdc85bQ6PDY0 202 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 TbckQ8BM85 762 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Q9D937 123 aaKnown RBP17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Ankrd34bQ3UUF8 508 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Zbtb17Q60821 794 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Dna2Q6ZQJ5 1062 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Slc38a7Q8BWH0 463 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 N4bp3Q8C7U1 537 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Tmem134Q8R0J4 195 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Tgm5Q9D7I9 724 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Dnajc12Q9R022 198 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Gm3460E9QAI8 215 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Lrrc8eQ66JT1 795 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Krt40Q6IFX3 439 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Supt20hQ7TT00 530 aaKnown RBP17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Arhgap15Q811M1 481 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Cnot3Q8K0V4 751 aaKnown RBP17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Stx18Q8VDS8 334 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Slc2a5Q9WV38 501 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Card9A2AIV8 536 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Serpinb9O08797 374 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Stat3P42227 770 aaKnown RBP17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Eif3hQ91WK2 352 aaKnown RBP17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 WaslQ91YD9 501 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Khdc3Q9CWU5 440 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Hormad1Q9D5T7 392 aa17.49■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Gm5795E9PZN8 263 aa17.48■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 AF366264G3X9P9 502 aa17.48■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Kcna3P16390 528 aa17.48■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Sept1P42209 366 aa17.48■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Scfd1Q8BRF7 639 aaKnown RBP17.48■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Rab14Q91V41 215 aaKnown RBP17.48■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Stk32bQ9JJX8 414 aa17.48■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Tgfb1i1Q62219 461 aa17.48■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 22.2 ms