RNA–Protein interactions for RNA: YDL060W

TSR1, Transcript of Protein required for processing of 20S pre-rRNA in the cytoplasm, yeastyeast

Gene TSR1, Length 2,367 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR1YDL060W CWP1P28319 239 aa3.4□□□□□ -1.86
TSR1YDL060W MSS51P32335 436 aa3.4□□□□□ -1.86
TSR1YDL060W CYM1P32898 989 aa3.4□□□□□ -1.86
TSR1YDL060W BIR1P47134 954 aa3.4□□□□□ -1.86
TSR1YDL060W YJR154WP47181 346 aa3.4□□□□□ -1.86
TSR1YDL060W NBP1P52919 319 aaPredicted RBP3.4□□□□□ -1.86
TSR1YDL060W FYV6P53913 173 aa3.4□□□□□ -1.86
TSR1YDL060W MRP51Q02950 344 aa3.4□□□□□ -1.86
TSR1YDL060W SCS7Q03529 384 aa3.4□□□□□ -1.86
TSR1YDL060W YDR249CQ03787 373 aa3.4□□□□□ -1.86
TSR1YDL060W NUP53Q03790 475 aa3.4□□□□□ -1.86
TSR1YDL060W IMA2Q08295 589 aa3.4□□□□□ -1.86
TSR1YDL060W SUC2P00724 532 aa3.4□□□□□ -1.87
TSR1YDL060W FUS3P16892 353 aaKnown RBP3.4□□□□□ -1.87
TSR1YDL060W MET16P18408 261 aaPredicted RBP3.4□□□□□ -1.87
TSR1YDL060W GPI12P23797 304 aa3.4□□□□□ -1.87
TSR1YDL060W RPL24BP24000 155 aaKnown RBP3.4□□□□□ -1.87
TSR1YDL060W PEX34P25584 144 aa3.4□□□□□ -1.87
TSR1YDL060W PPZ1P26570 692 aa3.4□□□□□ -1.87
TSR1YDL060W PMT2P31382 759 aa3.4□□□□□ -1.87
TSR1YDL060W SSO1P32867 290 aa3.4□□□□□ -1.87
TSR1YDL060W RSM22P36056 628 aa3.4□□□□□ -1.87
TSR1YDL060W YMR134WP40207 237 aa3.4□□□□□ -1.87
TSR1YDL060W FMC1P40491 155 aa3.4□□□□□ -1.87
TSR1YDL060W ERG10P41338 398 aaKnown RBP3.4□□□□□ -1.87
TSR1YDL060W IRC18P47056 224 aa3.4□□□□□ -1.87
TSR1YDL060W PKP2P53170 491 aa3.4□□□□□ -1.87
TSR1YDL060W MRPL50P53724 139 aa3.4□□□□□ -1.87
TSR1YDL060W GTO3Q04806 366 aa3.4□□□□□ -1.87
TSR1YDL060W SKI7Q08491 747 aaPredicted RBP3.4□□□□□ -1.87
TSR1YDL060W SCP1Q08873 200 aa3.4□□□□□ -1.87
TSR1YDL060W RPS18AP0CX55 146 aaKnown RBP3.39□□□□□ -1.87
TSR1YDL060W RPS18BP0CX56 146 aaPredicted RBP3.39□□□□□ -1.87
TSR1YDL060W CMK2P22517 447 aa3.39□□□□□ -1.87
TSR1YDL060W CSM1P25651 190 aa3.39□□□□□ -1.87
TSR1YDL060W YBL010CP32788 280 aa3.39□□□□□ -1.87
TSR1YDL060W ZRT3P34240 503 aa3.39□□□□□ -1.87
TSR1YDL060W SKG1P36169 355 aa3.39□□□□□ -1.87
TSR1YDL060W CHK1P38147 527 aa3.39□□□□□ -1.87
TSR1YDL060W YMR262WP38430 313 aa3.39□□□□□ -1.87
TSR1YDL060W PRS2P38620 318 aaKnown RBP3.39□□□□□ -1.87
TSR1YDL060W VMA10P48836 114 aaKnown RBP3.39□□□□□ -1.87
TSR1YDL060W LIF1P53150 421 aa3.39□□□□□ -1.87
TSR1YDL060W CRC1Q12289 327 aa3.39□□□□□ -1.87
TSR1YDL060W YRF1-3P0CX14 1859 aa3.39□□□□□ -1.87
TSR1YDL060W YRF1-7P0CX15 1859 aa3.39□□□□□ -1.87
TSR1YDL060W YRF1-6P53819 1859 aa3.39□□□□□ -1.87
TSR1YDL060W TDH3P00359 332 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
TSR1YDL060W MAS2P11914 482 aa3.39□□□□□ -1.87
TSR1YDL060W CKA2P19454 339 aa3.39□□□□□ -1.87
TSR1YDL060W MAK32P23060 363 aa3.39□□□□□ -1.87
TSR1YDL060W RSA4P25382 515 aaKnown RBP3.39□□□□□ -1.87
TSR1YDL060W CBP4P37267 147 aa3.39□□□□□ -1.87
TSR1YDL060W STV1P37296 890 aa3.39□□□□□ -1.87
TSR1YDL060W FRT2P39734 528 aa3.39□□□□□ -1.87
TSR1YDL060W PEP8P40335 379 aa3.39□□□□□ -1.87
TSR1YDL060W UTP25P40498 721 aaKnown RBP3.39□□□□□ -1.87
TSR1YDL060W HOC1P47124 396 aa3.39□□□□□ -1.87
TSR1YDL060W SPP2Q02521 185 aa3.39□□□□□ -1.87
TSR1YDL060W YPL014WQ02606 381 aa3.39□□□□□ -1.87
TSR1YDL060W YPL068CQ02749 293 aa3.39□□□□□ -1.87
TSR1YDL060W ENT5Q03769 411 aaKnown RBP3.39□□□□□ -1.87
TSR1YDL060W RVB1Q03940 463 aaKnown RBP3.39□□□□□ -1.87
TSR1YDL060W SEN15Q04675 128 aa3.39□□□□□ -1.87
TSR1YDL060W BUR2Q05949 395 aa3.39□□□□□ -1.87
TSR1YDL060W ESA1Q08649 445 aa3.39□□□□□ -1.87
TSR1YDL060W MDM32Q12171 622 aa3.39□□□□□ -1.87
TSR1YDL060W RTR2Q12378 196 aa3.39□□□□□ -1.87
TSR1YDL060W PRP46Q12417 451 aaPredicted RBP3.39□□□□□ -1.87
TSR1YDL060W YLR111WQ12528 110 aa3.39□□□□□ -1.87
TSR1YDL060W PMD1P32634 1753 aa3.39□□□□□ -1.87
TSR1YDL060W YFR010W-AP0C5N0 62 aa3.38□□□□□ -1.87
TSR1YDL060W SLM5P25345 492 aaKnown RBP3.38□□□□□ -1.87
TSR1YDL060W YCR101CP25607 182 aa3.38□□□□□ -1.87
TSR1YDL060W APE2P32454 952 aaKnown RBP3.38□□□□□ -1.87
TSR1YDL060W GDH2P33327 1092 aaKnown RBP3.38□□□□□ -1.87
TSR1YDL060W SDH3P33421 198 aa3.38□□□□□ -1.87
TSR1YDL060W GPX2P38143 162 aa3.38□□□□□ -1.87
TSR1YDL060W PHO89P38361 574 aa3.38□□□□□ -1.87
TSR1YDL060W HXT9P40885 567 aa3.38□□□□□ -1.87
TSR1YDL060W MRH4P53166 561 aa3.38□□□□□ -1.87
TSR1YDL060W SOL4P53315 255 aa3.38□□□□□ -1.87
TSR1YDL060W MCH4Q08268 501 aa3.38□□□□□ -1.87
TSR1YDL060W RKM5Q12367 367 aa3.38□□□□□ -1.87
TSR1YDL060W YPR1Q12458 312 aa3.38□□□□□ -1.87
TSR1YDL060W YOS9Q99220 542 aa3.38□□□□□ -1.87
TSR1YDL060W UBA3Q99344 299 aa3.38□□□□□ -1.87
TSR1YDL060W MAK31P23059 88 aa3.38□□□□□ -1.87
TSR1YDL060W LDS1P31379 325 aa3.38□□□□□ -1.87
TSR1YDL060W YKL097CP34245 136 aa3.38□□□□□ -1.87
TSR1YDL060W JEN1P36035 616 aa3.38□□□□□ -1.87
TSR1YDL060W YKL162CP36052 402 aa3.38□□□□□ -1.87
TSR1YDL060W RIM2P38127 377 aa3.38□□□□□ -1.87
TSR1YDL060W IPI1P38803 334 aaPredicted RBP3.38□□□□□ -1.87
TSR1YDL060W PRM9P39551 298 aa3.38□□□□□ -1.87
TSR1YDL060W YAL037WP39728 267 aa3.38□□□□□ -1.87
TSR1YDL060W YER184CP39961 794 aa3.38□□□□□ -1.87
TSR1YDL060W AGE2P40529 298 aa3.38□□□□□ -1.87
TSR1YDL060W MAK3Q03503 176 aa3.38□□□□□ -1.87
TSR1YDL060W YLL056CQ12177 298 aa3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 78.9 ms