RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeastyeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR2YDL042C ASP3-2P0CX77 362 aa4.54□□□□□ -1.68
SIR2YDL042C ASP3-3P0CX78 362 aa4.54□□□□□ -1.68
SIR2YDL042C ASP3-4P0CX79 362 aa4.54□□□□□ -1.68
SIR2YDL042C ASP3-1P0CZ17 362 aa4.54□□□□□ -1.68
SIR2YDL042C PDC2P32896 925 aa4.54□□□□□ -1.68
SIR2YDL042C MRPL27P36526 146 aaPredicted RBP4.54□□□□□ -1.68
SIR2YDL042C RRF1P38771 230 aa4.54□□□□□ -1.68
SIR2YDL042C TPS1Q00764 495 aaKnown RBP4.54□□□□□ -1.68
SIR2YDL042C RMI1Q02685 241 aa4.54□□□□□ -1.68
SIR2YDL042C FLO1P32768 1537 aa4.53□□□□□ -1.68
SIR2YDL042C YKL071WP36086 256 aa4.53□□□□□ -1.68
SIR2YDL042C SLF1Q12034 447 aaKnown RBP4.53□□□□□ -1.68
SIR2YDL042C SOD1P00445 154 aaKnown RBP4.52□□□□□ -1.69
SIR2YDL042C CBP6P07253 162 aaPredicted RBP4.52□□□□□ -1.69
SIR2YDL042C MEI5P32489 222 aa4.52□□□□□ -1.69
SIR2YDL042C ECT1P33412 323 aa4.52□□□□□ -1.69
SIR2YDL042C MRP21P38175 177 aa4.52□□□□□ -1.69
SIR2YDL042C INA22P40576 216 aa4.52□□□□□ -1.69
SIR2YDL042C VOA1P53262 265 aa4.52□□□□□ -1.69
SIR2YDL042C DBP6P53734 629 aaKnown RBP4.52□□□□□ -1.69
SIR2YDL042C RPL21AQ02753 160 aaKnown RBP4.52□□□□□ -1.69
SIR2YDL042C MRX11Q03079 207 aa4.52□□□□□ -1.69
SIR2YDL042C SCS7Q03529 384 aa4.52□□□□□ -1.69
SIR2YDL042C INM2Q05533 292 aa4.52□□□□□ -1.69
SIR2YDL042C MSS116P15424 664 aaKnown RBP4.51□□□□□ -1.69
SIR2YDL042C SHE3P38272 425 aaKnown RBP4.51□□□□□ -1.69
SIR2YDL042C FET3P38993 636 aa4.51□□□□□ -1.69
SIR2YDL042C PCL7P40186 285 aa4.51□□□□□ -1.69
SIR2YDL042C YPR1Q12458 312 aa4.51□□□□□ -1.69
SIR2YDL042C ADH1P00330 348 aaKnown RBP4.51□□□□□ -1.69
SIR2YDL042C REP1P03871 373 aa4.51□□□□□ -1.69
SIR2YDL042C CTA1P15202 515 aa4.51□□□□□ -1.69
SIR2YDL042C YKL162CP36052 402 aa4.51□□□□□ -1.69
SIR2YDL042C YGR018CP53211 109 aa4.51□□□□□ -1.69
SIR2YDL042C ARP5P53946 755 aa4.51□□□□□ -1.69
SIR2YDL042C MCH1Q07376 486 aa4.51□□□□□ -1.69
SIR2YDL042C KTI12P34253 313 aaKnown RBP4.5□□□□□ -1.69
SIR2YDL042C FHL1P39521 936 aa4.5□□□□□ -1.69
SIR2YDL042C VEL1P53058 206 aa4.5□□□□□ -1.69
SIR2YDL042C VAC14Q06708 880 aa4.5□□□□□ -1.69
SIR2YDL042C GSC2P40989 1895 aa4.49□□□□□ -1.69
SIR2YDL042C CAR2P07991 424 aaKnown RBP4.49□□□□□ -1.69
SIR2YDL042C BGL2P15703 313 aaKnown RBP4.49□□□□□ -1.69
SIR2YDL042C SAR1P20606 190 aaKnown RBP4.49□□□□□ -1.69
SIR2YDL042C MRPL40P36534 297 aa4.49□□□□□ -1.69
SIR2YDL042C DTR1P38125 572 aa4.49□□□□□ -1.69
SIR2YDL042C CHL4P38907 458 aa4.49□□□□□ -1.69
SIR2YDL042C FAR10Q06001 478 aa4.49□□□□□ -1.69
SIR2YDL042C SAM4Q08985 325 aaKnown RBP4.49□□□□□ -1.69
SIR2YDL042C DCP1Q12517 231 aaPredicted RBP4.49□□□□□ -1.69
SIR2YDL042C NCB2Q92317 146 aa4.49□□□□□ -1.69
SIR2YDL042C SMP1P38128 452 aa4.48□□□□□ -1.69
SIR2YDL042C LOC1P43586 204 aaPredicted RBP4.48□□□□□ -1.69
SIR2YDL042C NRM1P53718 249 aa4.48□□□□□ -1.69
SIR2YDL042C YPL080CQ02826 108 aa4.48□□□□□ -1.69
SIR2YDL042C RRG8Q06109 277 aa4.48□□□□□ -1.69
SIR2YDL042C RPN8Q08723 338 aaKnown RBP4.48□□□□□ -1.69
SIR2YDL042C RDL2Q08742 149 aaKnown RBP4.48□□□□□ -1.69
SIR2YDL042C PFK27Q12471 397 aaPredicted RBP4.48□□□□□ -1.69
SIR2YDL042C DBP3P20447 523 aaKnown RBP4.48□□□□□ -1.69
SIR2YDL042C DAL80P26343 269 aa4.48□□□□□ -1.69
SIR2YDL042C SEO1P39709 593 aa4.48□□□□□ -1.69
SIR2YDL042C CDC40P40968 455 aaPredicted RBP4.48□□□□□ -1.69
SIR2YDL042C LOH1P47055 219 aa4.48□□□□□ -1.69
SIR2YDL042C SPS19P32573 292 aaKnown RBP4.47□□□□□ -1.69
SIR2YDL042C OKP1P53298 406 aa4.47□□□□□ -1.69
SIR2YDL042C VHS1Q03785 461 aa4.47□□□□□ -1.69
SIR2YDL042C YMR111CQ04461 462 aaPredicted RBP4.47□□□□□ -1.69
SIR2YDL042C MRX9Q07349 420 aaKnown RBP4.47□□□□□ -1.69
SIR2YDL042C YLR012CQ07927 99 aa4.47□□□□□ -1.69
SIR2YDL042C MMT2Q08970 484 aa4.47□□□□□ -1.69
SIR2YDL042C PRM4Q12498 284 aa4.47□□□□□ -1.69
SIR2YDL042C PDR18P53756 1333 aa4.46□□□□□ -1.7
SIR2YDL042C SPS100P13130 326 aa4.46□□□□□ -1.7
SIR2YDL042C EPT1P22140 391 aa4.46□□□□□ -1.7
SIR2YDL042C RAD23P32628 398 aaKnown RBP4.46□□□□□ -1.7
SIR2YDL042C ZRT1P32804 376 aa4.46□□□□□ -1.7
SIR2YDL042C RPS0AP32905 252 aaKnown RBP4.46□□□□□ -1.7
SIR2YDL042C MID2P36027 376 aa4.46□□□□□ -1.7
SIR2YDL042C GGC1P38988 300 aa4.45□□□□□ -1.7
SIR2YDL042C YFL040WP43562 540 aa4.45□□□□□ -1.7
SIR2YDL042C TPC1P53257 314 aa4.45□□□□□ -1.7
SIR2YDL042C CBF5P33322 483 aaKnown RBP RIP-Chip data4.45□□□□□ -1.7not detected
SIR2YDL042C MRPS9P38120 278 aa4.45□□□□□ -1.7
SIR2YDL042C EFM1P38732 585 aa4.45□□□□□ -1.7
SIR2YDL042C YHR035WP38769 630 aa4.45□□□□□ -1.7
SIR2YDL042C DSE1P40077 573 aa4.45□□□□□ -1.7
SIR2YDL042C PMT4P46971 762 aa4.45□□□□□ -1.7
SIR2YDL042C PNC1P53184 216 aaKnown RBP4.45□□□□□ -1.7
SIR2YDL042C NKP2Q06162 153 aa4.45□□□□□ -1.7
SIR2YDL042C PBP4Q07362 185 aaKnown RBP4.45□□□□□ -1.7
SIR2YDL042C COQ1P18900 473 aa4.44□□□□□ -1.7
SIR2YDL042C TAE1P38340 232 aa4.44□□□□□ -1.7
SIR2YDL042C ECM34P38728 170 aa4.44□□□□□ -1.7
SIR2YDL042C ERV25P54837 211 aaKnown RBP4.44□□□□□ -1.7
SIR2YDL042C API2Q04413 109 aa4.44□□□□□ -1.7
SIR2YDL042C DTD1Q07648 150 aaKnown RBP4.44□□□□□ -1.7
SIR2YDL042C YIL002W-AQ3E7Z5 69 aa4.44□□□□□ -1.7
SIR2YDL042C STE2D6VTK4 431 aa4.43□□□□□ -1.7
SIR2YDL042C TPI1P00942 248 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 6.2 ms