RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 GCLMP48507 274 aa14.93□□□□□ -0.02
PHGDH-233ENST00000642021 STAT2P52630 851 aa14.93□□□□□ -0.02
PHGDH-233ENST00000642021 IFI35P80217 286 aaPredicted RBP14.93□□□□□ -0.02
PHGDH-233ENST00000642021 CCDC121Q6ZUS5 278 aa14.93□□□□□ -0.02
PHGDH-233ENST00000642021 SEPT12Q8IYM1 358 aa14.93□□□□□ -0.02
PHGDH-233ENST00000642021 LXNQ9BS40 222 aa14.93□□□□□ -0.02
PHGDH-233ENST00000642021 MRIQ9BWK5 157 aa14.93□□□□□ -0.02
PHGDH-233ENST00000642021 ADAM7Q9H2U9 754 aa14.93□□□□□ -0.02
PHGDH-233ENST00000642021 GOLGA6L10A0A0M3HER8 536 aa14.92□□□□□ -0.02
PHGDH-233ENST00000642021 DDX39AO00148 427 aaKnown RBP14.92□□□□□ -0.02
PHGDH-233ENST00000642021 ATMINO43313 823 aaPredicted RBP14.92□□□□□ -0.02
PHGDH-233ENST00000642021 RPL21P46778 160 aaKnown RBP14.92□□□□□ -0.02
PHGDH-233ENST00000642021 C1orf220Q5T0J3 134 aa14.92□□□□□ -0.02
PHGDH-233ENST00000642021 ERMARDQ5T6L9 678 aa14.92□□□□□ -0.02
PHGDH-233ENST00000642021 RPUSD2Q8IZ73 545 aaKnown RBP14.92□□□□□ -0.02
PHGDH-233ENST00000642021 C3orf20Q8ND61 904 aa14.92□□□□□ -0.02
PHGDH-233ENST00000642021 PLEKHO2Q8TD55 490 aa14.92□□□□□ -0.02
PHGDH-233ENST00000642021 SH2D3AQ9BRG2 576 aa14.92□□□□□ -0.02
PHGDH-233ENST00000642021 CBWD1Q9BRT8 395 aa14.92□□□□□ -0.02
PHGDH-233ENST00000642021 ZNF577Q9BSK1 485 aa14.92□□□□□ -0.02
PHGDH-233ENST00000642021 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.92□□□□□ -0.02
PHGDH-233ENST00000642021 PCDHA3Q9Y5H8 950 aa14.92□□□□□ -0.02
PHGDH-233ENST00000642021 FAM187AA6NFU0 413 aa14.92□□□□□ -0.02
PHGDH-233ENST00000642021 NUDT17P0C025 328 aa14.92□□□□□ -0.02
PHGDH-233ENST00000642021 CCDC172P0C7W6 258 aa14.92□□□□□ -0.02
PHGDH-233ENST00000642021 POLR2MP0CAP2 368 aa14.92□□□□□ -0.02
PHGDH-233ENST00000642021 COMTP21964 271 aa14.92□□□□□ -0.02
PHGDH-233ENST00000642021 PEX5P50542 639 aa14.92□□□□□ -0.02
PHGDH-233ENST00000642021 SMTNP53814 917 aa14.92□□□□□ -0.02
PHGDH-233ENST00000642021 EIF3BP55884 814 aaKnown RBP14.92□□□□□ -0.02
PHGDH-233ENST00000642021 STRIP1Q5VSL9 837 aa14.92□□□□□ -0.02
PHGDH-233ENST00000642021 B3GNT9Q6UX72 402 aa14.92□□□□□ -0.02
PHGDH-233ENST00000642021 CPLX4Q7Z7G2 160 aa14.92□□□□□ -0.02
PHGDH-233ENST00000642021 SLC9A9Q8IVB4 645 aa14.92□□□□□ -0.02
PHGDH-233ENST00000642021 BTBD6Q96KE9 485 aa14.92□□□□□ -0.02
PHGDH-233ENST00000642021 PRMT6Q96LA8 375 aaPredicted RBP14.92□□□□□ -0.02
PHGDH-233ENST00000642021 XPO6Q96QU8 1125 aaKnown RBP14.92□□□□□ -0.02
PHGDH-233ENST00000642021 NAP1L3Q99457 506 aaPredicted RBP14.92□□□□□ -0.02
PHGDH-233ENST00000642021 CD248Q9HCU0 757 aa14.92□□□□□ -0.02
PHGDH-233ENST00000642021 SLC40A1Q9NP59 571 aa14.92□□□□□ -0.02
PHGDH-233ENST00000642021 PKD2L1Q9P0L9 805 aa14.92□□□□□ -0.02
PHGDH-233ENST00000642021 ODF2LQ9ULJ1 636 aa14.92□□□□□ -0.02
PHGDH-233ENST00000642021 ANKRD63C9JTQ0 380 aa14.91□□□□□ -0.02
PHGDH-233ENST00000642021 ATP2C2O75185 946 aa14.91□□□□□ -0.02
PHGDH-233ENST00000642021 SGPL1O95470 568 aa14.91□□□□□ -0.02
PHGDH-233ENST00000642021 PYGMP11217 842 aa14.91□□□□□ -0.02
PHGDH-233ENST00000642021 CHN1P15882 459 aa14.91□□□□□ -0.02
PHGDH-233ENST00000642021 MKRN4PQ13434 485 aaPredicted RBP14.91□□□□□ -0.02
PHGDH-233ENST00000642021 DHX34Q14147 1143 aaKnown RBP14.91□□□□□ -0.02
PHGDH-233ENST00000642021 MESDQ14696 234 aa14.91□□□□□ -0.02
PHGDH-233ENST00000642021 LLGL1Q15334 1064 aa14.91□□□□□ -0.02
PHGDH-233ENST00000642021 RHOT2Q8IXI1 618 aa14.91□□□□□ -0.02
PHGDH-233ENST00000642021 NEK9Q8TD19 979 aa14.91□□□□□ -0.02
PHGDH-233ENST00000642021 MTFR1LQ9H019 292 aa14.91□□□□□ -0.02
PHGDH-233ENST00000642021 ZNF219Q9P2Y4 722 aaPredicted RBP14.91□□□□□ -0.02
PHGDH-233ENST00000642021 GOLGA6L7A0A1B0GV03 622 aa14.91□□□□□ -0.02
PHGDH-233ENST00000642021 CTNND1O60716 968 aaKnown RBP14.91□□□□□ -0.02
PHGDH-233ENST00000642021 ALDH1B1P30837 517 aa14.91□□□□□ -0.02
PHGDH-233ENST00000642021 USP8P40818 1118 aa14.91□□□□□ -0.02
PHGDH-233ENST00000642021 DRG2P55039 364 aaKnown RBP14.91□□□□□ -0.02
PHGDH-233ENST00000642021 ANKRD20A8PQ5CZ79 823 aa14.91□□□□□ -0.02
PHGDH-233ENST00000642021 CACNA2D3Q8IZS8 1091 aa14.91□□□□□ -0.02
PHGDH-233ENST00000642021 CCDC114Q96M63 670 aa14.91□□□□□ -0.02
PHGDH-233ENST00000642021 CSRNP1Q96S65 589 aa14.91□□□□□ -0.02
PHGDH-233ENST00000642021 ZSWIM1Q9BR11 485 aa14.91□□□□□ -0.02
PHGDH-233ENST00000642021 AZI2Q9H6S1 392 aa14.91□□□□□ -0.02
PHGDH-233ENST00000642021 KLC4Q9NSK0 619 aa14.91□□□□□ -0.02
PHGDH-233ENST00000642021 ARHGEF35A5YM69 484 aa14.9□□□□□ -0.02
PHGDH-233ENST00000642021 K7ENM7 598 aa14.9□□□□□ -0.02
PHGDH-233ENST00000642021 ECE2O60344 883 aa14.9□□□□□ -0.02
PHGDH-233ENST00000642021 PHF2O75151 1096 aa14.9□□□□□ -0.02
PHGDH-233ENST00000642021 CHRNB2P17787 502 aa14.9□□□□□ -0.02
PHGDH-233ENST00000642021 KCNJ1P48048 391 aa14.9□□□□□ -0.02
PHGDH-233ENST00000642021 HADHBP55084 474 aaKnown RBP14.9□□□□□ -0.02
PHGDH-233ENST00000642021 PPP2R5EQ16537 467 aa14.9□□□□□ -0.02
PHGDH-233ENST00000642021 SPDYCQ5MJ68 293 aa14.9□□□□□ -0.02
PHGDH-233ENST00000642021 STXBP4Q6ZWJ1 553 aa14.9□□□□□ -0.02
PHGDH-233ENST00000642021 ZNF317Q96PQ6 595 aaPredicted RBP14.9□□□□□ -0.02
PHGDH-233ENST00000642021 UBE4BO95155 1302 aa14.9□□□□□ -0.02
PHGDH-233ENST00000642021 VIL1P09327 827 aaKnown RBP14.9□□□□□ -0.02
PHGDH-233ENST00000642021 BCRP11274 1271 aa14.9□□□□□ -0.02
PHGDH-233ENST00000642021 CTNNA2P26232 953 aa14.9□□□□□ -0.02
PHGDH-233ENST00000642021 VAMP7P51809 220 aa14.9□□□□□ -0.02
PHGDH-233ENST00000642021 GPC5P78333 572 aa14.9□□□□□ -0.02
PHGDH-233ENST00000642021 GKAP1Q5VSY0 366 aaPredicted RBP14.9□□□□□ -0.02
PHGDH-233ENST00000642021 DENND2CQ68D51 928 aa14.9□□□□□ -0.02
PHGDH-233ENST00000642021 PADI6Q6TGC4 694 aa14.9□□□□□ -0.02
PHGDH-233ENST00000642021 CHMP6Q96FZ7 201 aa14.9□□□□□ -0.02
PHGDH-233ENST00000642021 ANKRD31Q8N7Z5 1873 aa14.9□□□□□ -0.02
PHGDH-233ENST00000642021 NRXN2Q9P2S2 1712 aa14.9□□□□□ -0.02
PHGDH-233ENST00000642021 IPO5O00410 1097 aaKnown RBP14.9□□□□□ -0.02
PHGDH-233ENST00000642021 NPM3O75607 178 aaKnown RBP14.9□□□□□ -0.02
PHGDH-233ENST00000642021 FGFR4P22455 802 aa14.9□□□□□ -0.02
PHGDH-233ENST00000642021 MMP13P45452 471 aa14.9□□□□□ -0.02
PHGDH-233ENST00000642021 SLCO1A2P46721 670 aa14.9□□□□□ -0.02
PHGDH-233ENST00000642021 DRP2Q13474 957 aa14.9□□□□□ -0.02
PHGDH-233ENST00000642021 TBC1D10BQ4KMP7 808 aaPredicted RBP14.9□□□□□ -0.02
PHGDH-233ENST00000642021 EPC2Q52LR7 807 aa14.9□□□□□ -0.02
PHGDH-233ENST00000642021 C11orf63Q6NUN7 778 aa14.9□□□□□ -0.02
PHGDH-233ENST00000642021 CCDC137Q6PK04 289 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms