RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 TRIM50Q86XT4 487 aa17.9■□□□□ 0.46
PHGDH-216ENST00000641375 FBXL18Q96ME1 805 aa17.9■□□□□ 0.46
PHGDH-216ENST00000641375 TINF2Q9BSI4 451 aa17.9■□□□□ 0.46
PHGDH-216ENST00000641375 KATNBL1Q9H079 304 aa17.9■□□□□ 0.46
PHGDH-216ENST00000641375 ABHD16BQ9H3Z7 469 aa17.9■□□□□ 0.46
PHGDH-216ENST00000641375 PRDM10Q9NQV6 1147 aa17.9■□□□□ 0.46
PHGDH-216ENST00000641375 ERAP1Q9NZ08 941 aa17.9■□□□□ 0.46
PHGDH-216ENST00000641375 K7ERI5 159 aa17.89■□□□□ 0.45
PHGDH-216ENST00000641375 IGF2BP3O00425 579 aaKnown RBP eCLIP17.89■□□□□ 0.45
PHGDH-216ENST00000641375 KIAA0391O15091 583 aaKnown RBP17.89■□□□□ 0.45
PHGDH-216ENST00000641375 KRT86O43790 486 aa17.89■□□□□ 0.45
PHGDH-216ENST00000641375 HBP1O60381 514 aa17.89■□□□□ 0.45
PHGDH-216ENST00000641375 SNAI1O95863 264 aaPredicted RBP17.89■□□□□ 0.45
PHGDH-216ENST00000641375 LIG4P49917 911 aa17.89■□□□□ 0.45
PHGDH-216ENST00000641375 ENPEPQ07075 957 aa17.89■□□□□ 0.45
PHGDH-216ENST00000641375 MXD4Q14582 209 aaPredicted RBP17.89■□□□□ 0.45
PHGDH-216ENST00000641375 TAF1CQ15572 869 aaPredicted RBP17.89■□□□□ 0.45
PHGDH-216ENST00000641375 PPTC7Q8NI37 304 aa17.89■□□□□ 0.45
PHGDH-216ENST00000641375 TMEM134Q9H6X4 195 aa17.89■□□□□ 0.45
PHGDH-216ENST00000641375 SIX2Q9NPC8 291 aa17.89■□□□□ 0.45
PHGDH-216ENST00000641375 CPA4Q9UI42 421 aa17.89■□□□□ 0.45
PHGDH-216ENST00000641375 BZW2Q9Y6E2 419 aaKnown RBP17.89■□□□□ 0.45
PHGDH-216ENST00000641375 ADGRA2Q96PE1 1338 aa17.89■□□□□ 0.45
PHGDH-216ENST00000641375 PMM2O15305 246 aa17.89■□□□□ 0.45
PHGDH-216ENST00000641375 RFX1P22670 979 aa17.89■□□□□ 0.45
PHGDH-216ENST00000641375 ARHGAP25P42331 645 aa17.89■□□□□ 0.45
PHGDH-216ENST00000641375 ASIC2Q16515 512 aa17.89■□□□□ 0.45
PHGDH-216ENST00000641375 SLC39A4Q6P5W5 647 aa17.89■□□□□ 0.45
PHGDH-216ENST00000641375 FMNL3Q8IVF7 1028 aa17.89■□□□□ 0.45
PHGDH-216ENST00000641375 TXLNBQ8N3L3 684 aa17.89■□□□□ 0.45
PHGDH-216ENST00000641375 KIAA1586Q9HCI6 787 aa17.89■□□□□ 0.45
PHGDH-216ENST00000641375 TRPC6Q9Y210 931 aa17.89■□□□□ 0.45
PHGDH-216ENST00000641375 FHOD1Q9Y613 1164 aa17.89■□□□□ 0.45
PHGDH-216ENST00000641375 IGKV6-21A0A0C4DH24 114 aa17.88■□□□□ 0.45
PHGDH-216ENST00000641375 A0A0U1RQJ8 604 aa17.88■□□□□ 0.45
PHGDH-216ENST00000641375 TLR2O60603 784 aa17.88■□□□□ 0.45
PHGDH-216ENST00000641375 PIGRP01833 764 aa17.88■□□□□ 0.45
PHGDH-216ENST00000641375 TMEM63BQ5T3F8 832 aa17.88■□□□□ 0.45
PHGDH-216ENST00000641375 SLFN12LQ6IEE8 588 aa17.88■□□□□ 0.45
PHGDH-216ENST00000641375 GPD1LQ8N335 351 aa17.88■□□□□ 0.45
PHGDH-216ENST00000641375 ATRIPQ8WXE1 791 aa17.88■□□□□ 0.45
PHGDH-216ENST00000641375 WDR24Q96S15 920 aa17.88■□□□□ 0.45
PHGDH-216ENST00000641375 TSGA10Q9BZW7 698 aa17.88■□□□□ 0.45
PHGDH-216ENST00000641375 L2HGDHQ9H9P8 463 aa17.88■□□□□ 0.45
PHGDH-216ENST00000641375 ZBTB42B2RXF5 422 aa17.87■□□□□ 0.45
PHGDH-216ENST00000641375 ADCYAP1R1P41586 468 aa17.87■□□□□ 0.45
PHGDH-216ENST00000641375 VAV2P52735 878 aa17.87■□□□□ 0.45
PHGDH-216ENST00000641375 EFNA5P52803 228 aa17.87■□□□□ 0.45
PHGDH-216ENST00000641375 DLG4P78352 724 aa17.87■□□□□ 0.45
PHGDH-216ENST00000641375 KLHL30Q0D2K2 578 aa17.87■□□□□ 0.45
PHGDH-216ENST00000641375 ASTE1Q2TB18 679 aaPredicted RBP17.87■□□□□ 0.45
PHGDH-216ENST00000641375 CCDC122Q5T0U0 273 aa17.87■□□□□ 0.45
PHGDH-216ENST00000641375 CBWD2Q8IUF1 395 aa17.87■□□□□ 0.45
PHGDH-216ENST00000641375 EHBP1Q8NDI1 1231 aa17.87■□□□□ 0.45
PHGDH-216ENST00000641375 PRPF31Q8WWY3 499 aaKnown RBP17.87■□□□□ 0.45
PHGDH-216ENST00000641375 PSPC1Q8WXF1 523 aaKnown RBP17.87■□□□□ 0.45
PHGDH-216ENST00000641375 SAAL1Q96ER3 474 aa17.87■□□□□ 0.45
PHGDH-216ENST00000641375 STYXL1Q9Y6J8 313 aa17.87■□□□□ 0.45
PHGDH-216ENST00000641375 GOLGA8IPA6NC78 632 aa17.87■□□□□ 0.45
PHGDH-216ENST00000641375 GOLGA8JA6NMD2 632 aa17.87■□□□□ 0.45
PHGDH-216ENST00000641375 ADCY3O60266 1144 aa17.87■□□□□ 0.45
PHGDH-216ENST00000641375 SLC10A3P09131 477 aa17.87■□□□□ 0.45
PHGDH-216ENST00000641375 JAM2P57087 298 aa17.87■□□□□ 0.45
PHGDH-216ENST00000641375 IRF5Q13568 498 aa17.87■□□□□ 0.45
PHGDH-216ENST00000641375 CAPSQ13938 189 aa17.87■□□□□ 0.45
PHGDH-216ENST00000641375 ZSWIM2Q8NEG5 633 aa17.87■□□□□ 0.45
PHGDH-216ENST00000641375 TMC2Q8TDI7 906 aa17.87■□□□□ 0.45
PHGDH-216ENST00000641375 JAKMIP2Q96AA8 810 aa17.87■□□□□ 0.45
PHGDH-216ENST00000641375 MFSD14AQ96MC6 490 aa17.87■□□□□ 0.45
PHGDH-216ENST00000641375 IFIH1Q9BYX4 1025 aaKnown RBP17.87■□□□□ 0.45
PHGDH-216ENST00000641375 IRX2Q9BZI1 471 aaPredicted RBP17.87■□□□□ 0.45
PHGDH-216ENST00000641375 INTS2Q9H0H0 1204 aaKnown RBP17.87■□□□□ 0.45
PHGDH-216ENST00000641375 SUGCTQ9HAC7 445 aa17.87■□□□□ 0.45
PHGDH-216ENST00000641375 LUC7LQ9NQ29 371 aaKnown RBP17.87■□□□□ 0.45
PHGDH-216ENST00000641375 APEX2Q9UBZ4 518 aa17.87■□□□□ 0.45
PHGDH-216ENST00000641375 PASKQ96RG2 1323 aa17.86■□□□□ 0.45
PHGDH-216ENST00000641375 PPFIA4O75335 1185 aa17.86■□□□□ 0.45
PHGDH-216ENST00000641375 LGALS2P05162 132 aa17.86■□□□□ 0.45
PHGDH-216ENST00000641375 ADRB2P07550 413 aa17.86■□□□□ 0.45
PHGDH-216ENST00000641375 KIF5AQ12840 1032 aa17.86■□□□□ 0.45
PHGDH-216ENST00000641375 ACVR2BQ13705 512 aa17.86■□□□□ 0.45
PHGDH-216ENST00000641375 DUSP28Q4G0W2 176 aa17.86■□□□□ 0.45
PHGDH-216ENST00000641375 ZNF569Q5MCW4 686 aa17.86■□□□□ 0.45
PHGDH-216ENST00000641375 IQSEC1Q6DN90 963 aa17.86■□□□□ 0.45
PHGDH-216ENST00000641375 IFNL1Q8IU54 200 aa17.86■□□□□ 0.45
PHGDH-216ENST00000641375 PARD3BQ8TEW8 1205 aa17.86■□□□□ 0.45
PHGDH-216ENST00000641375 RBAK-RBAKDNI3L0D1 243 aa17.86■□□□□ 0.45
PHGDH-216ENST00000641375 MXI1P50539 228 aa17.86■□□□□ 0.45
PHGDH-216ENST00000641375 CYP27A1Q02318 531 aa17.86■□□□□ 0.45
PHGDH-216ENST00000641375 PPP3CAQ08209 521 aa17.86■□□□□ 0.45
PHGDH-216ENST00000641375 ZNF484Q5JVG2 852 aa17.86■□□□□ 0.45
PHGDH-216ENST00000641375 MORN1Q5T089 497 aa17.86■□□□□ 0.45
PHGDH-216ENST00000641375 TAF3Q5VWG9 929 aa17.86■□□□□ 0.45
PHGDH-216ENST00000641375 IQCEQ6IPM2 695 aa17.86■□□□□ 0.45
PHGDH-216ENST00000641375 NPLOC4Q8TAT6 608 aa17.86■□□□□ 0.45
PHGDH-216ENST00000641375 STK33Q9BYT3 514 aa17.86■□□□□ 0.45
PHGDH-216ENST00000641375 GUCA1BQ9UMX6 200 aa17.86■□□□□ 0.45
PHGDH-216ENST00000641375 PCDHA13Q9Y5I0 950 aa17.86■□□□□ 0.45
PHGDH-216ENST00000641375 ZNF233A6NK53 670 aa17.85■□□□□ 0.45
PHGDH-216ENST00000641375 ZNF263O14978 683 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms