RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 KCNMA1Q12791 1236 aa10.59□□□□□ -0.71
PHGDH-215ENST00000641371 PCBP1Q15365 356 aaKnown RBP eCLIP10.59□□□□□ -0.712e-6■■■□□ 14.6
PHGDH-215ENST00000641371 MAPK6Q16659 721 aa10.59□□□□□ -0.71
PHGDH-215ENST00000641371 KYAT1Q16773 422 aa10.59□□□□□ -0.71
PHGDH-215ENST00000641371 ARHGAP29Q52LW3 1261 aa10.59□□□□□ -0.71
PHGDH-215ENST00000641371 SFMBT2Q5VUG0 894 aa10.59□□□□□ -0.71
PHGDH-215ENST00000641371 APBB1IPQ7Z5R6 666 aaPredicted RBP10.59□□□□□ -0.71
PHGDH-215ENST00000641371 OR6J1Q8NGC5 347 aa10.59□□□□□ -0.71
PHGDH-215ENST00000641371 USP6NLQ92738 828 aa10.59□□□□□ -0.71
PHGDH-215ENST00000641371 C16orf45Q96MC5 204 aaPredicted RBP10.59□□□□□ -0.71
PHGDH-215ENST00000641371 SPAG5Q96R06 1193 aa10.59□□□□□ -0.71
PHGDH-215ENST00000641371 KATNAL1Q9BW62 490 aa10.59□□□□□ -0.71
PHGDH-215ENST00000641371 MRPL4Q9BYD3 311 aaKnown RBP10.59□□□□□ -0.71
PHGDH-215ENST00000641371 DEF6Q9H4E7 631 aa10.59□□□□□ -0.71
PHGDH-215ENST00000641371 HAUS4Q9H6D7 363 aa10.59□□□□□ -0.71
PHGDH-215ENST00000641371 BCAS3Q9H6U6 928 aa10.59□□□□□ -0.71
PHGDH-215ENST00000641371 AIPL1Q9NZN9 384 aa10.59□□□□□ -0.71
PHGDH-215ENST00000641371 GCNT4Q9P109 453 aa10.59□□□□□ -0.71
PHGDH-215ENST00000641371 ZHX1Q9UKY1 873 aaPredicted RBP10.59□□□□□ -0.71
PHGDH-215ENST00000641371 MGAMO43451 1857 aa10.59□□□□□ -0.71
PHGDH-215ENST00000641371 SOWAHDA6NJG2 315 aa10.58□□□□□ -0.72
PHGDH-215ENST00000641371 RASSF10A6NK89 507 aa10.58□□□□□ -0.72
PHGDH-215ENST00000641371 FAM155AB1AL88 458 aaPredicted RBP10.58□□□□□ -0.72
PHGDH-215ENST00000641371 TNPO2O14787 897 aaKnown RBP10.58□□□□□ -0.72
PHGDH-215ENST00000641371 KRT86O43790 486 aa10.58□□□□□ -0.72
PHGDH-215ENST00000641371 ZC3H11AO75152 810 aaKnown RBP eCLIP10.58□□□□□ -0.72
PHGDH-215ENST00000641371 UCHL3P15374 230 aa10.58□□□□□ -0.72
PHGDH-215ENST00000641371 FERP16591 822 aa10.58□□□□□ -0.72
PHGDH-215ENST00000641371 PON1P27169 355 aa10.58□□□□□ -0.72
PHGDH-215ENST00000641371 PHKA2P46019 1235 aa10.58□□□□□ -0.72
PHGDH-215ENST00000641371 CPT1AP50416 773 aa10.58□□□□□ -0.72
PHGDH-215ENST00000641371 TNFAIP2Q03169 654 aa10.58□□□□□ -0.72
PHGDH-215ENST00000641371 GRM1Q13255 1194 aa10.58□□□□□ -0.72
PHGDH-215ENST00000641371 SNRNP35Q16560 246 aaKnown RBP10.58□□□□□ -0.72
PHGDH-215ENST00000641371 KLHDC7AQ5VTJ3 777 aa10.58□□□□□ -0.72
PHGDH-215ENST00000641371 RRAGAQ7L523 313 aa10.58□□□□□ -0.72
PHGDH-215ENST00000641371 ENOSF1Q7L5Y1 443 aa10.58□□□□□ -0.72
PHGDH-215ENST00000641371 TRMT1LQ7Z2T5 733 aaKnown RBP10.58□□□□□ -0.72
PHGDH-215ENST00000641371 IFNLR1Q8IU57 520 aaPredicted RBP10.58□□□□□ -0.72
PHGDH-215ENST00000641371 BSNDQ8WZ55 320 aa10.58□□□□□ -0.72
PHGDH-215ENST00000641371 BAP1Q92560 729 aa10.58□□□□□ -0.72
PHGDH-215ENST00000641371 MFSD14AQ96MC6 490 aa10.58□□□□□ -0.72
PHGDH-215ENST00000641371 GANQ9H2C0 597 aa10.58□□□□□ -0.72
PHGDH-215ENST00000641371 R3HDMLQ9H3Y0 253 aa10.58□□□□□ -0.72
PHGDH-215ENST00000641371 NHEJ1Q9H9Q4 299 aaPredicted RBP10.58□□□□□ -0.72
PHGDH-215ENST00000641371 TMEM8AQ9HCN3 771 aa10.58□□□□□ -0.72
PHGDH-215ENST00000641371 PDGFCQ9NRA1 345 aa10.58□□□□□ -0.72
PHGDH-215ENST00000641371 AGPAT5Q9NUQ2 364 aa10.58□□□□□ -0.72
PHGDH-215ENST00000641371 TRMT1Q9NXH9 659 aaKnown RBP10.58□□□□□ -0.72
PHGDH-215ENST00000641371 A6NJR5 290 aa10.57□□□□□ -0.72
PHGDH-215ENST00000641371 H3BRB1 525 aa10.57□□□□□ -0.72
PHGDH-215ENST00000641371 SORBS3O60504 671 aa10.57□□□□□ -0.72
PHGDH-215ENST00000641371 TOM1L1O75674 476 aa10.57□□□□□ -0.72
PHGDH-215ENST00000641371 LCA5LO95447 670 aa10.57□□□□□ -0.72
PHGDH-215ENST00000641371 MMP3P08254 477 aa10.57□□□□□ -0.72
PHGDH-215ENST00000641371 ADCYAP1R1P41586 468 aa10.57□□□□□ -0.72
PHGDH-215ENST00000641371 PRKCIP41743 596 aa10.57□□□□□ -0.72
PHGDH-215ENST00000641371 STAT1P42224 750 aa10.57□□□□□ -0.72
PHGDH-215ENST00000641371 MXI1P50539 228 aa10.57□□□□□ -0.72
PHGDH-215ENST00000641371 POLR2FP61218 127 aaKnown RBP10.57□□□□□ -0.72
PHGDH-215ENST00000641371 GOLGA8FQ08AF8 430 aa10.57□□□□□ -0.72
PHGDH-215ENST00000641371 GOLGA8DPQ0D2H9 430 aa10.57□□□□□ -0.72
PHGDH-215ENST00000641371 CAPSQ13938 189 aa10.57□□□□□ -0.72
PHGDH-215ENST00000641371 KIF22Q14807 665 aa10.57□□□□□ -0.72
PHGDH-215ENST00000641371 ASIC2Q16515 512 aa10.57□□□□□ -0.72
PHGDH-215ENST00000641371 PTPN21Q16825 1174 aa10.57□□□□□ -0.72
PHGDH-215ENST00000641371 FAM187BQ17R55 369 aa10.57□□□□□ -0.72
PHGDH-215ENST00000641371 MFSD14CQ5VZR4 134 aa10.57□□□□□ -0.72
PHGDH-215ENST00000641371 KRT39Q6A163 491 aa10.57□□□□□ -0.72
PHGDH-215ENST00000641371 WDR59Q6PJI9 974 aa10.57□□□□□ -0.72
PHGDH-215ENST00000641371 RAD9BQ6WBX8 426 aa10.57□□□□□ -0.72
PHGDH-215ENST00000641371 ZNF410Q86VK4 478 aa10.57□□□□□ -0.72
PHGDH-215ENST00000641371 REXO1L1PQ8IX06 675 aa10.57□□□□□ -0.72
PHGDH-215ENST00000641371 C17orf53Q8N3J3 647 aaPredicted RBP10.57□□□□□ -0.72
PHGDH-215ENST00000641371 NPLOC4Q8TAT6 608 aa10.57□□□□□ -0.72
PHGDH-215ENST00000641371 ASAP3Q8TDY4 903 aa10.57□□□□□ -0.72
PHGDH-215ENST00000641371 AFG1LQ8WV93 481 aa10.57□□□□□ -0.72
PHGDH-215ENST00000641371 TMEM143Q96AN5 459 aa10.57□□□□□ -0.72
PHGDH-215ENST00000641371 MAP7D2Q96T17 732 aa10.57□□□□□ -0.72
PHGDH-215ENST00000641371 SH2D3AQ9BRG2 576 aa10.57□□□□□ -0.72
PHGDH-215ENST00000641371 CBWD1Q9BRT8 395 aa10.57□□□□□ -0.72
PHGDH-215ENST00000641371 CFHR5Q9BXR6 569 aa10.57□□□□□ -0.72
PHGDH-215ENST00000641371 STK33Q9BYT3 514 aa10.57□□□□□ -0.72
PHGDH-215ENST00000641371 AP5M1Q9H0R1 490 aa10.57□□□□□ -0.72
PHGDH-215ENST00000641371 TUT1Q9H6E5 874 aaKnown RBP10.57□□□□□ -0.72
PHGDH-215ENST00000641371 POLD4Q9HCU8 107 aa10.57□□□□□ -0.72
PHGDH-215ENST00000641371 PRMT7Q9NVM4 692 aaPredicted RBP10.57□□□□□ -0.72
PHGDH-215ENST00000641371 SUCLA2Q9P2R7 463 aaPredicted RBP10.57□□□□□ -0.72
PHGDH-215ENST00000641371 APEX2Q9UBZ4 518 aa10.57□□□□□ -0.72
PHGDH-215ENST00000641371 AGO2Q9UKV8 859 aaKnown RBP10.57□□□□□ -0.72
PHGDH-215ENST00000641371 COQ4Q9Y3A0 265 aa10.57□□□□□ -0.72
PHGDH-215ENST00000641371 ADGRA3Q8IWK6 1321 aa10.57□□□□□ -0.72
PHGDH-215ENST00000641371 DOCK3Q8IZD9 2030 aa10.57□□□□□ -0.72
PHGDH-215ENST00000641371 LRRC53A6NM62 1247 aa10.56□□□□□ -0.72
PHGDH-215ENST00000641371 ACKR2O00590 384 aa10.56□□□□□ -0.72
PHGDH-215ENST00000641371 KIF3CO14782 793 aa10.56□□□□□ -0.72
PHGDH-215ENST00000641371 AKR1B10O60218 316 aa10.56□□□□□ -0.72
PHGDH-215ENST00000641371 ZEB2O60315 1214 aa10.56□□□□□ -0.72
PHGDH-215ENST00000641371 NOL4O94818 638 aa10.56□□□□□ -0.72
PHGDH-215ENST00000641371 GNAT1P11488 350 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms