RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 UBXN2BQ14CS0 331 aa9.25□□□□□ -0.93
SCARB2-226ENST00000640916 CSRP2Q16527 193 aa9.25□□□□□ -0.93
SCARB2-226ENST00000640916 IFIT1BQ5T764 474 aaKnown RBP9.25□□□□□ -0.93
SCARB2-226ENST00000640916 C20orf194Q5TEA3 1177 aa9.25□□□□□ -0.93
SCARB2-226ENST00000640916 LAIR1Q6GTX8 287 aa9.25□□□□□ -0.93
SCARB2-226ENST00000640916 CYB5R4Q7L1T6 521 aa9.25□□□□□ -0.93
SCARB2-226ENST00000640916 GPIHBP1Q8IV16 184 aa9.25□□□□□ -0.93
SCARB2-226ENST00000640916 LINC01465Q8N7H1 131 aa9.25□□□□□ -0.93
SCARB2-226ENST00000640916 RNF169Q8NCN4 708 aa9.25□□□□□ -0.93
SCARB2-226ENST00000640916 SMARCC2Q8TAQ2 1214 aa9.25□□□□□ -0.93
SCARB2-226ENST00000640916 STAMQ92783 540 aa9.25□□□□□ -0.93
SCARB2-226ENST00000640916 TNPO1Q92973 898 aaKnown RBP9.25□□□□□ -0.93
SCARB2-226ENST00000640916 EMILIN2Q9BXX0 1053 aa9.25□□□□□ -0.93
SCARB2-226ENST00000640916 MRPL9Q9BYD2 267 aaKnown RBP9.25□□□□□ -0.93
SCARB2-226ENST00000640916 TBC1D13Q9NVG8 400 aa9.25□□□□□ -0.93
SCARB2-226ENST00000640916 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.25□□□□□ -0.93
SCARB2-226ENST00000640916 NFASCO94856 1347 aa9.25□□□□□ -0.93
SCARB2-226ENST00000640916 COL1A2P08123 1366 aa9.24□□□□□ -0.93
SCARB2-226ENST00000640916 C3orf80F5H4A9 247 aa9.24□□□□□ -0.93
SCARB2-226ENST00000640916 MAFGO15525 162 aa9.24□□□□□ -0.93
SCARB2-226ENST00000640916 CCNE2O96020 404 aa9.24□□□□□ -0.93
SCARB2-226ENST00000640916 SSBP05455 408 aaKnown RBP eCLIP9.24□□□□□ -0.93
SCARB2-226ENST00000640916 RETP07949 1114 aa9.24□□□□□ -0.93
SCARB2-226ENST00000640916 FGFR4P22455 802 aa9.24□□□□□ -0.93
SCARB2-226ENST00000640916 MAGEA9P43362 315 aa9.24□□□□□ -0.93
SCARB2-226ENST00000640916 RPS9P46781 194 aaKnown RBP9.24□□□□□ -0.93
SCARB2-226ENST00000640916 PRSS12P56730 875 aa9.24□□□□□ -0.93
SCARB2-226ENST00000640916 PRKCQQ04759 706 aa9.24□□□□□ -0.93
SCARB2-226ENST00000640916 MTAPQ13126 283 aa9.24□□□□□ -0.93
SCARB2-226ENST00000640916 LRSAM1Q6UWE0 723 aa9.24□□□□□ -0.93
SCARB2-226ENST00000640916 ABHD15Q6UXT9 468 aa9.24□□□□□ -0.93
SCARB2-226ENST00000640916 TAS1R1Q7RTX1 841 aa9.24□□□□□ -0.93
SCARB2-226ENST00000640916 ZNF280BQ86YH2 543 aa9.24□□□□□ -0.93
SCARB2-226ENST00000640916 PIBF1Q8WXW3 757 aa9.24□□□□□ -0.93
SCARB2-226ENST00000640916 SMG7Q92540 1137 aaKnown RBP9.24□□□□□ -0.93
SCARB2-226ENST00000640916 LPPQ93052 612 aa9.24□□□□□ -0.93
SCARB2-226ENST00000640916 FAM126AQ9BYI3 521 aaPredicted RBP9.24□□□□□ -0.93
SCARB2-226ENST00000640916 NT5C3AQ9H0P0 336 aa9.24□□□□□ -0.93
SCARB2-226ENST00000640916 KCNH7Q9NS40 1196 aa9.24□□□□□ -0.93
SCARB2-226ENST00000640916 WASF3Q9UPY6 502 aa9.24□□□□□ -0.93
SCARB2-226ENST00000640916 VPS9D1Q9Y2B5 631 aa9.24□□□□□ -0.93
SCARB2-226ENST00000640916 AKAP13Q12802 2813 aa9.23□□□□□ -0.93
SCARB2-226ENST00000640916 GCN1Q92616 2671 aaKnown RBP9.23□□□□□ -0.93
SCARB2-226ENST00000640916 COL4A2P08572 1712 aa9.23□□□□□ -0.93
SCARB2-226ENST00000640916 IGF2RP11717 2491 aa9.23□□□□□ -0.93
SCARB2-226ENST00000640916 TEX28O15482 410 aa9.23□□□□□ -0.93
SCARB2-226ENST00000640916 OFD1O75665 1012 aa9.23□□□□□ -0.93
SCARB2-226ENST00000640916 DDHD2O94830 711 aa9.23□□□□□ -0.93
SCARB2-226ENST00000640916 ZSCAN20P17040 1043 aaPredicted RBP9.23□□□□□ -0.93
SCARB2-226ENST00000640916 FECHP22830 423 aa9.23□□□□□ -0.93
SCARB2-226ENST00000640916 EIF4BP23588 611 aaKnown RBP9.23□□□□□ -0.93
SCARB2-226ENST00000640916 SLC26A2P50443 739 aa9.23□□□□□ -0.93
SCARB2-226ENST00000640916 CLCN3P51790 818 aa9.23□□□□□ -0.93
SCARB2-226ENST00000640916 AFF1P51825 1210 aaKnown RBP9.23□□□□□ -0.93
SCARB2-226ENST00000640916 NLRP11P59045 1033 aaKnown RBP9.23□□□□□ -0.93
SCARB2-226ENST00000640916 TROAPQ12815 778 aa9.23□□□□□ -0.93
SCARB2-226ENST00000640916 ZNF484Q5JVG2 852 aa9.23□□□□□ -0.93
SCARB2-226ENST00000640916 ZBTB41Q5SVQ8 909 aa9.23□□□□□ -0.93
SCARB2-226ENST00000640916 UNQ6494/PRO21346Q6UXR6 183 aa9.23□□□□□ -0.93
SCARB2-226ENST00000640916 RSPO2Q6UXX9 243 aaPredicted RBP9.23□□□□□ -0.93
SCARB2-226ENST00000640916 GET4Q7L5D6 327 aaPredicted RBP9.23□□□□□ -0.93
SCARB2-226ENST00000640916 CCDC60Q8IWA6 550 aaPredicted RBP9.23□□□□□ -0.93
SCARB2-226ENST00000640916 RNF168Q8IYW5 571 aaPredicted RBP9.23□□□□□ -0.93
SCARB2-226ENST00000640916 CELF5Q8N6W0 485 aaKnown RBP9.23□□□□□ -0.93
SCARB2-226ENST00000640916 ZNF668Q96K58 619 aaPredicted RBP9.23□□□□□ -0.93
SCARB2-226ENST00000640916 RXFP3Q9NSD7 469 aa9.23□□□□□ -0.93
SCARB2-226ENST00000640916 CSDE1O75534 798 aaKnown RBP9.22□□□□□ -0.93
SCARB2-226ENST00000640916 SPATA31D3P0C874 917 aa9.22□□□□□ -0.93
SCARB2-226ENST00000640916 NCLP19338 710 aaKnown RBP9.22□□□□□ -0.93
SCARB2-226ENST00000640916 PHKA2P46019 1235 aa9.22□□□□□ -0.93
SCARB2-226ENST00000640916 LIMK1P53667 647 aa9.22□□□□□ -0.93
SCARB2-226ENST00000640916 RING1Q06587 406 aa9.22□□□□□ -0.93
SCARB2-226ENST00000640916 UBE2SQ16763 222 aa9.22□□□□□ -0.93
SCARB2-226ENST00000640916 PROX2Q3B8N5 592 aa9.22□□□□□ -0.93
SCARB2-226ENST00000640916 LONRF3Q496Y0 759 aa9.22□□□□□ -0.93
SCARB2-226ENST00000640916 NOMO2Q5JPE7 1267 aa9.22□□□□□ -0.93
SCARB2-226ENST00000640916 LILRA6Q6PI73 481 aa9.22□□□□□ -0.93
SCARB2-226ENST00000640916 SPATA31D4Q6ZUB0 917 aa9.22□□□□□ -0.93
SCARB2-226ENST00000640916 DDX1Q92499 740 aaKnown RBP9.22□□□□□ -0.93
SCARB2-226ENST00000640916 CUL5Q93034 780 aa9.22□□□□□ -0.93
SCARB2-226ENST00000640916 RPS6KC1Q96S38 1066 aa9.22□□□□□ -0.93
SCARB2-226ENST00000640916 MXRA8Q9BRK3 442 aa9.22□□□□□ -0.93
SCARB2-226ENST00000640916 UBAC1Q9BSL1 405 aa9.22□□□□□ -0.93
SCARB2-226ENST00000640916 MYL10Q9BUA6 226 aa9.22□□□□□ -0.93
SCARB2-226ENST00000640916 TRAIPQ9BWF2 469 aa9.22□□□□□ -0.93
SCARB2-226ENST00000640916 CHMP4BQ9H444 224 aaKnown RBP9.22□□□□□ -0.93
SCARB2-226ENST00000640916 RXFP1Q9HBX9 757 aa9.22□□□□□ -0.93
SCARB2-226ENST00000640916 AGO4Q9HCK5 861 aaKnown RBP9.22□□□□□ -0.93
SCARB2-226ENST00000640916 MRPL17Q9NRX2 175 aaKnown RBP9.22□□□□□ -0.93
SCARB2-226ENST00000640916 FAM217BQ9NTX9 383 aaPredicted RBP9.22□□□□□ -0.93
SCARB2-226ENST00000640916 MARCH5Q9NX47 278 aa9.22□□□□□ -0.93
SCARB2-226ENST00000640916 DSPP15924 2871 aaKnown RBP9.22□□□□□ -0.93
SCARB2-226ENST00000640916 SRRM3A6NNA2 597 aaPredicted RBP9.21□□□□□ -0.94
SCARB2-226ENST00000640916 TAF4O00268 1085 aa9.21□□□□□ -0.94
SCARB2-226ENST00000640916 C2CD2LO14523 706 aa9.21□□□□□ -0.94
SCARB2-226ENST00000640916 ZIC2O95409 532 aaPredicted RBP9.21□□□□□ -0.94
SCARB2-226ENST00000640916 GLUD1P00367 558 aa9.21□□□□□ -0.94
SCARB2-226ENST00000640916 SOD2P04179 222 aa9.21□□□□□ -0.94
SCARB2-226ENST00000640916 DARSP14868 501 aaKnown RBP9.21□□□□□ -0.94
SCARB2-226ENST00000640916 GPC3P51654 580 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms