RNA–Protein interactions for RNA: ENST00000640287.1

PAX6-268, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 1,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-268ENST00000640287 PVALEFA0A1B0GWK0 134 aa16.73■□□□□ 0.27
PAX6-268ENST00000640287 ACKR2O00590 384 aa16.73■□□□□ 0.27
PAX6-268ENST00000640287 B4GALT5O43286 388 aa16.73■□□□□ 0.27
PAX6-268ENST00000640287 ABCD1P33897 745 aa16.73■□□□□ 0.27
PAX6-268ENST00000640287 BMP8BP34820 402 aa16.73■□□□□ 0.27
PAX6-268ENST00000640287 BICD1Q96G01 975 aa16.73■□□□□ 0.27
PAX6-268ENST00000640287 CCDC113Q9H0I3 377 aa16.73■□□□□ 0.27
PAX6-268ENST00000640287 FZD8Q9H461 694 aa16.73■□□□□ 0.27
PAX6-268ENST00000640287 CHST12Q9NRB3 414 aa16.73■□□□□ 0.27
PAX6-268ENST00000640287 OLFML3Q9NRN5 406 aa16.73■□□□□ 0.27
PAX6-268ENST00000640287 CXXC1Q9P0U4 656 aaPredicted RBP16.73■□□□□ 0.27
PAX6-268ENST00000640287 SLC4A7Q9Y6M7 1214 aa16.73■□□□□ 0.27
PAX6-268ENST00000640287 SMC2O95347 1197 aa16.73■□□□□ 0.27
PAX6-268ENST00000640287 AMHP03971 560 aa16.73■□□□□ 0.27
PAX6-268ENST00000640287 RPN1P04843 607 aaKnown RBP16.73■□□□□ 0.27
PAX6-268ENST00000640287 ARF4P18085 180 aaPredicted RBP16.73■□□□□ 0.27
PAX6-268ENST00000640287 SCP2P22307 547 aa16.73■□□□□ 0.27
PAX6-268ENST00000640287 AXLP30530 894 aa16.73■□□□□ 0.27
PAX6-268ENST00000640287 MCM4P33991 863 aa16.73■□□□□ 0.27
PAX6-268ENST00000640287 WDR5P61964 334 aaKnown RBP16.73■□□□□ 0.27
PAX6-268ENST00000640287 DPYDQ12882 1025 aa16.73■□□□□ 0.27
PAX6-268ENST00000640287 AMHR2Q16671 573 aa16.73■□□□□ 0.27
PAX6-268ENST00000640287 FAM187BQ17R55 369 aa16.73■□□□□ 0.27
PAX6-268ENST00000640287 ZC2HC1CQ53FD0 456 aaPredicted RBP16.73■□□□□ 0.27
PAX6-268ENST00000640287 FAM26FQ5R3K3 315 aa16.73■□□□□ 0.27
PAX6-268ENST00000640287 NOTUMQ6P988 496 aa16.73■□□□□ 0.27
PAX6-268ENST00000640287 PPP4R3CPQ6ZMV5 832 aa16.73■□□□□ 0.27
PAX6-268ENST00000640287 STXBP4Q6ZWJ1 553 aa16.73■□□□□ 0.27
PAX6-268ENST00000640287 ZNF720Q7Z2F6 126 aa16.73■□□□□ 0.27
PAX6-268ENST00000640287 TDHQ8IZJ6 230 aa16.73■□□□□ 0.27
PAX6-268ENST00000640287 MYOCDQ8IZQ8 938 aa16.73■□□□□ 0.27
PAX6-268ENST00000640287 HPS3Q969F9 1004 aa16.73■□□□□ 0.27
PAX6-268ENST00000640287 MRPL4Q9BYD3 311 aaKnown RBP16.73■□□□□ 0.27
PAX6-268ENST00000640287 TSPYL2Q9H2G4 693 aaPredicted RBP16.73■□□□□ 0.27
PAX6-268ENST00000640287 USP20Q9Y2K6 914 aa16.73■□□□□ 0.27
PAX6-268ENST00000640287 RANBP2P49792 3224 aaKnown RBP16.72■□□□□ 0.27
PAX6-268ENST00000640287 CNTNAP2Q9UHC6 1331 aa16.72■□□□□ 0.27
PAX6-268ENST00000640287 ENPP3O14638 875 aa16.72■□□□□ 0.27
PAX6-268ENST00000640287 MGEA5O60502 916 aa16.72■□□□□ 0.27
PAX6-268ENST00000640287 CAMK4Q16566 473 aa16.72■□□□□ 0.27
PAX6-268ENST00000640287 KMT5BQ4FZB7 885 aa16.72■□□□□ 0.27
PAX6-268ENST00000640287 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.72■□□□□ 0.27
PAX6-268ENST00000640287 FAM43BQ6ZT52 329 aaPredicted RBP16.72■□□□□ 0.27
PAX6-268ENST00000640287 LINC01599Q8WXQ3 324 aa16.72■□□□□ 0.27
PAX6-268ENST00000640287 ERCC4Q92889 916 aaPredicted RBP16.72■□□□□ 0.27
PAX6-268ENST00000640287 FIZ1Q96SL8 496 aa16.72■□□□□ 0.27
PAX6-268ENST00000640287 TRIM6Q9C030 488 aaPredicted RBP16.72■□□□□ 0.27
PAX6-268ENST00000640287 RGS18Q9NS28 235 aa16.72■□□□□ 0.27
PAX6-268ENST00000640287 C1orf112Q9NSG2 853 aa16.72■□□□□ 0.27
PAX6-268ENST00000640287 TBX20Q9UMR3 447 aa16.72■□□□□ 0.27
PAX6-268ENST00000640287 PCDHB13Q9Y5F0 798 aa16.72■□□□□ 0.27
PAX6-268ENST00000640287 KLRC4O43908 158 aa16.71■□□□□ 0.27
PAX6-268ENST00000640287 MYBP10242 640 aa16.71■□□□□ 0.27
PAX6-268ENST00000640287 HOXA11P31270 313 aaPredicted RBP16.71■□□□□ 0.27
PAX6-268ENST00000640287 ALCAMQ13740 583 aa16.71■□□□□ 0.27
PAX6-268ENST00000640287 DSC3Q14574 896 aa16.71■□□□□ 0.27
PAX6-268ENST00000640287 SLC24A5Q71RS6 500 aa16.71■□□□□ 0.27
PAX6-268ENST00000640287 TAS1R3Q7RTX0 852 aa16.71■□□□□ 0.27
PAX6-268ENST00000640287 CDR2LQ86X02 465 aaPredicted RBP16.71■□□□□ 0.27
PAX6-268ENST00000640287 RNF169Q8NCN4 708 aa16.71■□□□□ 0.27
PAX6-268ENST00000640287 SMARCE1Q969G3 411 aa16.71■□□□□ 0.27
PAX6-268ENST00000640287 CCDC51Q96ER9 411 aa16.71■□□□□ 0.27
PAX6-268ENST00000640287 SLC39A2Q9NP94 309 aa16.71■□□□□ 0.27
PAX6-268ENST00000640287 RMND1Q9NWS8 449 aa16.71■□□□□ 0.27
PAX6-268ENST00000640287 LRFN2Q9ULH4 789 aa16.71■□□□□ 0.27
PAX6-268ENST00000640287 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.7■□□□□ 0.26
PAX6-268ENST00000640287 TTLL13PA6NNM8 815 aa16.7■□□□□ 0.26
PAX6-268ENST00000640287 HNRNPDLO14979 420 aaKnown RBP16.7■□□□□ 0.26
PAX6-268ENST00000640287 N4BP3O15049 544 aa16.7■□□□□ 0.26
PAX6-268ENST00000640287 UPP2O95045 317 aa16.7■□□□□ 0.26
PAX6-268ENST00000640287 MBD3O95983 291 aa16.7■□□□□ 0.26
PAX6-268ENST00000640287 EDN1P05305 212 aa16.7■□□□□ 0.26
PAX6-268ENST00000640287 ATP2A2P16615 1042 aaKnown RBP16.7■□□□□ 0.26
PAX6-268ENST00000640287 MATR3P43243 847 aaKnown RBP eCLIP16.7■□□□□ 0.26
PAX6-268ENST00000640287 LIG4P49917 911 aa16.7■□□□□ 0.26
PAX6-268ENST00000640287 CASP5P51878 434 aa16.7■□□□□ 0.26
PAX6-268ENST00000640287 DEFB103AP81534 67 aa16.7■□□□□ 0.26
PAX6-268ENST00000640287 GTF2BQ00403 316 aa16.7■□□□□ 0.26
PAX6-268ENST00000640287 ATF7IP2Q5U623 682 aa16.7■□□□□ 0.26
PAX6-268ENST00000640287 FAM117BQ6P1L5 589 aa16.7■□□□□ 0.26
PAX6-268ENST00000640287 RTN4RL1Q86UN2 441 aaPredicted RBP16.7■□□□□ 0.26
PAX6-268ENST00000640287 ELOA2Q8IYF1 753 aaPredicted RBP16.7■□□□□ 0.26
PAX6-268ENST00000640287 SYCP3Q8IZU3 236 aa16.7■□□□□ 0.26
PAX6-268ENST00000640287 GPT2Q8TD30 523 aa16.7■□□□□ 0.26
PAX6-268ENST00000640287 SLC9A7Q96T83 725 aa16.7■□□□□ 0.26
PAX6-268ENST00000640287 ADPGKQ9BRR6 497 aa16.7■□□□□ 0.26
PAX6-268ENST00000640287 TCHPQ9BT92 498 aa16.7■□□□□ 0.26
PAX6-268ENST00000640287 TARS2Q9BW92 718 aaKnown RBP16.7■□□□□ 0.26
PAX6-268ENST00000640287 FGFBP2Q9BYJ0 223 aa16.7■□□□□ 0.26
PAX6-268ENST00000640287 ST6GALNAC4Q9H4F1 302 aa16.7■□□□□ 0.26
PAX6-268ENST00000640287 EXOC7Q9UPT5 735 aa16.7■□□□□ 0.26
PAX6-268ENST00000640287 COLQQ9Y215 455 aaPredicted RBP16.7■□□□□ 0.26
PAX6-268ENST00000640287 A0A1B0GUA9 196 aa16.69■□□□□ 0.26
PAX6-268ENST00000640287 PRPF6O94906 941 aaKnown RBP16.69■□□□□ 0.26
PAX6-268ENST00000640287 NPTXRO95502 500 aa16.69■□□□□ 0.26
PAX6-268ENST00000640287 SARSP49591 514 aaKnown RBP16.69■□□□□ 0.26
PAX6-268ENST00000640287 RAB27AP51159 221 aa16.69■□□□□ 0.26
PAX6-268ENST00000640287 PSMD2Q13200 908 aa16.69■□□□□ 0.26
PAX6-268ENST00000640287 NT5DC1Q5TFE4 455 aa16.69■□□□□ 0.26
PAX6-268ENST00000640287 SLC27A1Q6PCB7 646 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms