RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 ZNF274Q96GC6 653 aaPredicted RBP13.59□□□□□ -0.23
CACNA1A-250ENST00000637809 KLHL5Q96PQ7 755 aa13.59□□□□□ -0.23
CACNA1A-250ENST00000637809 JPH2Q9BR39 696 aaPredicted RBP13.59□□□□□ -0.23
CACNA1A-250ENST00000637809 LARP6Q9BRS8 491 aaKnown RBP13.59□□□□□ -0.23
CACNA1A-250ENST00000637809 SFXN1Q9H9B4 322 aa13.59□□□□□ -0.23
CACNA1A-250ENST00000637809 DCHS1Q96JQ0 3298 aa13.58□□□□□ -0.24
CACNA1A-250ENST00000637809 REC8O95072 547 aa13.58□□□□□ -0.24
CACNA1A-250ENST00000637809 LAMTOR4Q0VGL1 99 aa13.58□□□□□ -0.24
CACNA1A-250ENST00000637809 LETM2Q2VYF4 491 aa13.58□□□□□ -0.24
CACNA1A-250ENST00000637809 ASTLQ6HA08 431 aaPredicted RBP13.58□□□□□ -0.24
CACNA1A-250ENST00000637809 KRT25Q7Z3Z0 450 aa13.58□□□□□ -0.24
CACNA1A-250ENST00000637809 SRGAP1Q7Z6B7 1085 aa13.58□□□□□ -0.24
CACNA1A-250ENST00000637809 URGCPQ8TCY9 931 aa13.58□□□□□ -0.24
CACNA1A-250ENST00000637809 SLC7A3Q8WY07 619 aa13.58□□□□□ -0.24
CACNA1A-250ENST00000637809 HAS1Q92839 578 aa13.58□□□□□ -0.24
CACNA1A-250ENST00000637809 CEP170P1Q96L14 293 aa13.58□□□□□ -0.24
CACNA1A-250ENST00000637809 FAM20AQ96MK3 541 aa13.58□□□□□ -0.24
CACNA1A-250ENST00000637809 TMEM175Q9BSA9 504 aa13.58□□□□□ -0.24
CACNA1A-250ENST00000637809 PHF20Q9BVI0 1012 aa13.58□□□□□ -0.24
CACNA1A-250ENST00000637809 EMILIN2Q9BXX0 1053 aa13.58□□□□□ -0.24
CACNA1A-250ENST00000637809 RSAD1Q9HA92 442 aa13.58□□□□□ -0.24
CACNA1A-250ENST00000637809 MARCH5Q9NX47 278 aa13.58□□□□□ -0.24
CACNA1A-250ENST00000637809 STK39Q9UEW8 545 aa13.58□□□□□ -0.24
CACNA1A-250ENST00000637809 KCNJ14Q9UNX9 436 aa13.58□□□□□ -0.24
CACNA1A-250ENST00000637809 PPME1Q9Y570 386 aa13.58□□□□□ -0.24
CACNA1A-250ENST00000637809 NRP1O14786 923 aa13.57□□□□□ -0.24
CACNA1A-250ENST00000637809 CPLX1O14810 134 aa13.57□□□□□ -0.24
CACNA1A-250ENST00000637809 EFEMP2O95967 443 aa13.57□□□□□ -0.24
CACNA1A-250ENST00000637809 POMCP01189 267 aa13.57□□□□□ -0.24
CACNA1A-250ENST00000637809 SSBP05455 408 aaKnown RBP eCLIP13.57□□□□□ -0.24
CACNA1A-250ENST00000637809 P4HBP07237 508 aaKnown RBP13.57□□□□□ -0.24
CACNA1A-250ENST00000637809 SRGAP2CP0DJJ0 459 aa13.57□□□□□ -0.24
CACNA1A-250ENST00000637809 NCLP19338 710 aaKnown RBP13.57□□□□□ -0.24
CACNA1A-250ENST00000637809 KLRC2P26717 231 aa13.57□□□□□ -0.24
CACNA1A-250ENST00000637809 RFC5P40937 340 aa13.57□□□□□ -0.24
CACNA1A-250ENST00000637809 NBL1P41271 181 aa13.57□□□□□ -0.24
CACNA1A-250ENST00000637809 CLCN5P51795 746 aa13.57□□□□□ -0.24
CACNA1A-250ENST00000637809 CWF19L1Q69YN2 538 aaKnown RBP13.57□□□□□ -0.24
CACNA1A-250ENST00000637809 PPP4R3AQ6IN85 833 aa13.57□□□□□ -0.24
CACNA1A-250ENST00000637809 ASCL5Q7RTU5 278 aa13.57□□□□□ -0.24
CACNA1A-250ENST00000637809 TAS1R1Q7RTX1 841 aa13.57□□□□□ -0.24
CACNA1A-250ENST00000637809 SMG8Q8ND04 991 aaKnown RBP13.57□□□□□ -0.24
CACNA1A-250ENST00000637809 PSPC1Q8WXF1 523 aaKnown RBP13.57□□□□□ -0.24
CACNA1A-250ENST00000637809 SNX27Q96L92 541 aa13.57□□□□□ -0.24
CACNA1A-250ENST00000637809 KANSL3Q9P2N6 904 aa13.57□□□□□ -0.24
CACNA1A-250ENST00000637809 FAN1Q9Y2M0 1017 aa13.57□□□□□ -0.24
CACNA1A-250ENST00000637809 CYP46A1Q9Y6A2 500 aa13.57□□□□□ -0.24
CACNA1A-250ENST00000637809 CNTNAP2Q9UHC6 1331 aa13.57□□□□□ -0.24
CACNA1A-250ENST00000637809 INPPL1O15357 1258 aa13.56□□□□□ -0.24
CACNA1A-250ENST00000637809 EPB41L2O43491 1005 aaKnown RBP13.56□□□□□ -0.24
CACNA1A-250ENST00000637809 DKC1O60832 514 aaKnown RBP eCLIP13.56□□□□□ -0.24
CACNA1A-250ENST00000637809 ALDH2P05091 517 aa13.56□□□□□ -0.24
CACNA1A-250ENST00000637809 GCFC2P16383 781 aaKnown RBP13.56□□□□□ -0.24
CACNA1A-250ENST00000637809 NPR3P17342 541 aa13.56□□□□□ -0.24
CACNA1A-250ENST00000637809 SPIRE1Q08AE8 756 aa13.56□□□□□ -0.24
CACNA1A-250ENST00000637809 STK3Q13188 491 aa13.56□□□□□ -0.24
CACNA1A-250ENST00000637809 C15orf39Q6ZRI6 1047 aa13.56□□□□□ -0.24
CACNA1A-250ENST00000637809 CCDC149Q6ZUS6 474 aa13.56□□□□□ -0.24
CACNA1A-250ENST00000637809 OTOP3Q7RTS5 596 aa13.56□□□□□ -0.24
CACNA1A-250ENST00000637809 NEK8Q86SG6 692 aa13.56□□□□□ -0.24
CACNA1A-250ENST00000637809 FERMT3Q86UX7 667 aa13.56□□□□□ -0.24
CACNA1A-250ENST00000637809 C4orf19Q8IY42 314 aa13.56□□□□□ -0.24
CACNA1A-250ENST00000637809 EXOC8Q8IYI6 725 aa13.56□□□□□ -0.24
CACNA1A-250ENST00000637809 COLGALT2Q8IYK4 626 aa13.56□□□□□ -0.24
CACNA1A-250ENST00000637809 RNF168Q8IYW5 571 aaPredicted RBP13.56□□□□□ -0.24
CACNA1A-250ENST00000637809 RNF149Q8NC42 400 aa13.56□□□□□ -0.24
CACNA1A-250ENST00000637809 LXNQ9BS40 222 aa13.56□□□□□ -0.24
CACNA1A-250ENST00000637809 TM6SF1Q9BZW5 370 aa13.56□□□□□ -0.24
CACNA1A-250ENST00000637809 MRPL17Q9NRX2 175 aaKnown RBP13.56□□□□□ -0.24
CACNA1A-250ENST00000637809 BMP2KQ9NSY1 1161 aaPredicted RBP13.56□□□□□ -0.24
CACNA1A-250ENST00000637809 GJB4Q9NTQ9 266 aa13.56□□□□□ -0.24
CACNA1A-250ENST00000637809 RGL1Q9NZL6 768 aa13.56□□□□□ -0.24
CACNA1A-250ENST00000637809 FRYLO94915 3013 aa13.56□□□□□ -0.24
CACNA1A-250ENST00000637809 ZBTB39O15060 712 aa13.55□□□□□ -0.24
CACNA1A-250ENST00000637809 TBX3O15119 743 aa13.55□□□□□ -0.24
CACNA1A-250ENST00000637809 TSPAN1O60635 241 aa13.55□□□□□ -0.24
CACNA1A-250ENST00000637809 N4BP1O75113 896 aaKnown RBP13.55□□□□□ -0.24
CACNA1A-250ENST00000637809 SOD2P04179 222 aa13.55□□□□□ -0.24
CACNA1A-250ENST00000637809 YWHABP31946 246 aaKnown RBP13.55□□□□□ -0.24
CACNA1A-250ENST00000637809 DSC1Q08554 894 aa13.55□□□□□ -0.24
CACNA1A-250ENST00000637809 SCRN1Q12765 414 aa13.55□□□□□ -0.24
CACNA1A-250ENST00000637809 TDGQ13569 410 aa13.55□□□□□ -0.24
CACNA1A-250ENST00000637809 EMC2Q15006 297 aa13.55□□□□□ -0.24
CACNA1A-250ENST00000637809 EPHA7Q15375 998 aa13.55□□□□□ -0.24
CACNA1A-250ENST00000637809 EARS2Q5JPH6 523 aaKnown RBP13.55□□□□□ -0.24
CACNA1A-250ENST00000637809 CMASQ8NFW8 434 aaPredicted RBP13.55□□□□□ -0.24
CACNA1A-250ENST00000637809 OXER1Q8TDS5 423 aa13.55□□□□□ -0.24
CACNA1A-250ENST00000637809 ACSF2Q96CM8 615 aaPredicted RBP13.55□□□□□ -0.24
CACNA1A-250ENST00000637809 RPS6KC1Q96S38 1066 aa13.55□□□□□ -0.24
CACNA1A-250ENST00000637809 HERC2P3Q9BVR0 1158 aa13.55□□□□□ -0.24
CACNA1A-250ENST00000637809 EIF2AQ9BY44 585 aaKnown RBP13.55□□□□□ -0.24
CACNA1A-250ENST00000637809 RNF39Q9H2S5 420 aa13.55□□□□□ -0.24
CACNA1A-250ENST00000637809 KCNK12Q9HB15 430 aa13.55□□□□□ -0.24
CACNA1A-250ENST00000637809 XPNPEP1Q9NQW7 623 aa13.55□□□□□ -0.24
CACNA1A-250ENST00000637809 DUSP12Q9UNI6 340 aa13.55□□□□□ -0.24
CACNA1A-250ENST00000637809 IPPQ9Y573 584 aa13.55□□□□□ -0.24
CACNA1A-250ENST00000637809 WDR81Q562E7 1941 aa13.54□□□□□ -0.24
CACNA1A-250ENST00000637809 CCDC194A0A1B0GVG4 234 aa13.54□□□□□ -0.24
CACNA1A-250ENST00000637809 PRR23AA6NEV1 266 aa13.54□□□□□ -0.24
CACNA1A-250ENST00000637809 ARL5CA6NH57 179 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms