RNA–Protein interactions for RNA: ENST00000637788.1

ARID1A-217, Transcript of AT-rich interaction domain 1A, human

Gene ARID1A, Length 3,046 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARID1A-217	ENST00000637788	LRRC4C	Q9HCJ2	640 aa		11.17	□□□□□ -0.62
ARID1A-217	ENST00000637788	FAM114A2	Q9NRY5	505 aa		11.17	□□□□□ -0.62
ARID1A-217	ENST00000637788	LRRC4B	Q9NT99	713 aa		11.17	□□□□□ -0.62
ARID1A-217	ENST00000637788	PNMA3	Q9UL41	463 aa		11.17	□□□□□ -0.62
ARID1A-217	ENST00000637788	CD2AP	Q9Y5K6	639 aa		11.17	□□□□□ -0.62
ARID1A-217	ENST00000637788	NPHP3-ACAD11	A0A0J9YXS1	232 aa		11.16	□□□□□ -0.62
ARID1A-217	ENST00000637788	USP17L10	C9JJH3	530 aa		11.16	□□□□□ -0.62
ARID1A-217	ENST00000637788		E9PMD0	336 aa		11.16	□□□□□ -0.62
ARID1A-217	ENST00000637788	hCG_1984214	I3L0E3	225 aa		11.16	□□□□□ -0.62
ARID1A-217	ENST00000637788	SNHG28	P0DPA3	235 aa		11.16	□□□□□ -0.62
ARID1A-217	ENST00000637788	SLC1A4	P43007	532 aa		11.16	□□□□□ -0.62
ARID1A-217	ENST00000637788	EHHADH	Q08426	723 aa		11.16	□□□□□ -0.62
ARID1A-217	ENST00000637788	ZNF543	Q08ER8	600 aa		11.16	□□□□□ -0.62
ARID1A-217	ENST00000637788	CCDC15	Q0P6D6	951 aa		11.16	□□□□□ -0.62
ARID1A-217	ENST00000637788	MUM1	Q2TAK8	710 aa		11.16	□□□□□ -0.62
ARID1A-217	ENST00000637788	CRY2	Q49AN0	593 aa		11.16	□□□□□ -0.62
ARID1A-217	ENST00000637788	ZNF713	Q8N859	430 aa	Predicted RBP	11.16	□□□□□ -0.62
ARID1A-217	ENST00000637788	DNAJC19	Q96DA6	116 aa		11.16	□□□□□ -0.62
ARID1A-217	ENST00000637788	NUDCD1	Q96RS6	583 aa		11.16	□□□□□ -0.62
ARID1A-217	ENST00000637788	RIC8A	Q9NPQ8	531 aa		11.16	□□□□□ -0.62
ARID1A-217	ENST00000637788	PNMA6F	A0A0J9YX94	578 aa		11.16	□□□□□ -0.62
ARID1A-217	ENST00000637788	RBAK-RBAKDN	I3L0D1	243 aa		11.16	□□□□□ -0.62
ARID1A-217	ENST00000637788	TTLL1	O95922	423 aa		11.16	□□□□□ -0.62
ARID1A-217	ENST00000637788	SERPINB2	P05120	415 aa		11.16	□□□□□ -0.62
ARID1A-217	ENST00000637788	MPP3	Q13368	585 aa		11.16	□□□□□ -0.62
ARID1A-217	ENST00000637788	PDXDC1	Q6P996	788 aa		11.16	□□□□□ -0.62
ARID1A-217	ENST00000637788	GBP5	Q96PP8	586 aa		11.16	□□□□□ -0.62
ARID1A-217	ENST00000637788	PRDM16	Q9HAZ2	1276 aa		11.16	□□□□□ -0.62
ARID1A-217	ENST00000637788	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
ARID1A-217	ENST00000637788	PCDHA12	Q9UN75	941 aa		11.16	□□□□□ -0.62
ARID1A-217	ENST00000637788	MAGEA13P	A6NCF6	341 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	SIGLEC16	A6NMB1	481 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	CCDC169	A6NNP5	214 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	USP17L15	C9J2P7	530 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	USP17L13	C9JLJ4	530 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	USP17L11	C9JVI0	530 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	USP17L18	D6R9N7	530 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	USP17L22	D6RA61	530 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	USP17L17	D6RBQ6	530 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	USP17L19	D6RCP7	530 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	USP17L20	D6RJB6	530 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	NVL	O15381	856 aa	Known RBP	11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	AGT	P01019	485 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	SCNN1D	P51172	638 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	CACNA2D1	P54289	1103 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	ARID5A	Q03989	594 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	USP17L24	Q0WX57	530 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	FAM26F	Q5R3K3	315 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	SH2D4B	Q5SQS7	431 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	WASHC2D	Q5SRD0	308 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	USP17L6P	Q6QN14	398 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	AGGF1	Q8N302	714 aa	eCLIP	11.15	□□□□□ -0.62	4e-10	■□□□□ 10.7
ARID1A-217	ENST00000637788	HAPLN3	Q96S86	360 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	LRMDA	Q9H2I8	198 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	TXLNG	Q9NUQ3	528 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	PRKAG3	Q9UGI9	489 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	SERPINB13	Q9UIV8	391 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	RPL26L1	Q9UNX3	145 aa	Known RBP	11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	KIAA1024	Q9UPX6	916 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	COL4A3BP	Q9Y5P4	624 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	BZW2	Q9Y6E2	419 aa	Known RBP	11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	TMEM221	A6NGB7	291 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	ATP5H	O75947	161 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	FTCD	O95954	541 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	SKI	P12755	728 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	FKBP3	Q00688	224 aa	Known RBP	11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	MCL1	Q07820	350 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	TMEM62	Q0P6H9	643 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	HGSNAT	Q68CP4	663 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	ZNF365	Q70YC5	407 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	SLC17A8	Q8NDX2	589 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	ACTRT1	Q8TDG2	376 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	PPP1R14B	Q96C90	147 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	TMEM237	Q96Q45	408 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	CCDC28B	Q9BUN5	200 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	ZHX3	Q9H4I2	956 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	PSTPIP2	Q9H939	334 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	ETNK1	Q9HBU6	452 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	COMMD3-BMI1	R4GMX3	469 aa		11.15	□□□□□ -0.62
ARID1A-217	ENST00000637788	IGKV6D-41	A0A0C4DH26	115 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	SSU72P8	A0A1W2PR75	194 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	POTEB3	A0JP26	581 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	POTEC	B2RU33	542 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	TJP3	O95049	919 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	LMNA	P02545	664 aa	Known RBP	11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	GYS1	P13807	737 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	GM2A	P17900	193 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	KCNA3	P22001	575 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	EIF4B	P23588	611 aa	Known RBP	11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	SERPINB4	P48594	390 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	CLK2	P49760	499 aa	Known RBP	11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	POLR2F	P61218	127 aa	Known RBP	11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	LSAMP	Q13449	338 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	NAB2	Q15742	525 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	CNPY1	Q3B7I2	92 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	ZCWPW2	Q504Y3	356 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	POTEB	Q6S5H4	581 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	CROCCP2	Q86T23	111 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	CERS5	Q8N5B7	392 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	GATA6	Q92908	595 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms