RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 IQANK1A0A1B0GTG1 560 aa18.95■□□□□ 0.62
CACNA1A-227ENST00000636549 PDHA1P08559 390 aa18.95■□□□□ 0.62
CACNA1A-227ENST00000636549 CENPUQ71F23 418 aa18.95■□□□□ 0.62
CACNA1A-227ENST00000636549 FAM161BQ96MY7 647 aa18.95■□□□□ 0.62
CACNA1A-227ENST00000636549 ITIH6Q6UXX5 1313 aa18.94■□□□□ 0.62
CACNA1A-227ENST00000636549 TRIM49BA6NDI0 452 aa18.94■□□□□ 0.62
CACNA1A-227ENST00000636549 RNF168Q8IYW5 571 aaPredicted RBP18.94■□□□□ 0.62
CACNA1A-227ENST00000636549 ZNF274Q96GC6 653 aaPredicted RBP18.94■□□□□ 0.62
CACNA1A-227ENST00000636549 CHL1O00533 1208 aa18.94■□□□□ 0.62
CACNA1A-227ENST00000636549 ADCY3O60266 1144 aa18.94■□□□□ 0.62
CACNA1A-227ENST00000636549 MAP2K2P36507 400 aa18.94■□□□□ 0.62
CACNA1A-227ENST00000636549 AARSP49588 968 aaKnown RBP eCLIP18.94■□□□□ 0.62
CACNA1A-227ENST00000636549 HASPINQ8TF76 798 aa18.94■□□□□ 0.62
CACNA1A-227ENST00000636549 FAM136AQ96C01 138 aa18.94■□□□□ 0.62
CACNA1A-227ENST00000636549 CLMNQ96JQ2 1002 aa18.94■□□□□ 0.62
CACNA1A-227ENST00000636549 IL1RL2Q9HB29 575 aa18.94■□□□□ 0.62
CACNA1A-227ENST00000636549 USE1Q9NZ43 259 aa18.94■□□□□ 0.62
CACNA1A-227ENST00000636549 C5orf58C9J3I9 102 aa18.94■□□□□ 0.62
CACNA1A-227ENST00000636549 MCTP2Q6DN12 878 aa18.94■□□□□ 0.62
CACNA1A-227ENST00000636549 LRRC8AQ8IWT6 810 aa18.94■□□□□ 0.62
CACNA1A-227ENST00000636549 SPZ1Q9BXG8 430 aa18.94■□□□□ 0.62
CACNA1A-227ENST00000636549 TMEM63CQ9P1W3 806 aa18.94■□□□□ 0.62
CACNA1A-227ENST00000636549 PNMA6FA0A0J9YX94 578 aa18.94■□□□□ 0.62
CACNA1A-227ENST00000636549 E9PMD0 336 aa18.94■□□□□ 0.62
CACNA1A-227ENST00000636549 DEFB128Q7Z7B8 93 aa18.94■□□□□ 0.62
CACNA1A-227ENST00000636549 WDR75Q8IWA0 830 aaKnown RBP18.94■□□□□ 0.62
CACNA1A-227ENST00000636549 ZNF335Q9H4Z2 1342 aaPredicted RBP18.94■□□□□ 0.62
CACNA1A-227ENST00000636549 CCDC142Q17RM4 750 aa18.93■□□□□ 0.62
CACNA1A-227ENST00000636549 PGBD4Q96DM1 585 aa18.93■□□□□ 0.62
CACNA1A-227ENST00000636549 PABPC5Q96DU9 382 aaKnown RBP18.93■□□□□ 0.62
CACNA1A-227ENST00000636549 GNA15P30679 374 aa18.93■□□□□ 0.62
CACNA1A-227ENST00000636549 HLFQ16534 295 aa18.93■□□□□ 0.62
CACNA1A-227ENST00000636549 SLC44A2Q8IWA5 706 aaPredicted RBP18.93■□□□□ 0.62
CACNA1A-227ENST00000636549 WDR62O43379 1518 aa18.93■□□□□ 0.62
CACNA1A-227ENST00000636549 EFCAB14O75071 495 aa18.93■□□□□ 0.62
CACNA1A-227ENST00000636549 ZSWIM5Q9P217 1185 aa18.93■□□□□ 0.62
CACNA1A-227ENST00000636549 CNOT8Q9UFF9 292 aaKnown RBP18.93■□□□□ 0.62
CACNA1A-227ENST00000636549 DNAJC12Q9UKB3 198 aa18.93■□□□□ 0.62
CACNA1A-227ENST00000636549 ARAP3Q8WWN8 1544 aa18.93■□□□□ 0.62
CACNA1A-227ENST00000636549 TJP3O95049 919 aa18.93■□□□□ 0.62
CACNA1A-227ENST00000636549 SLC9A1P19634 815 aa18.93■□□□□ 0.62
CACNA1A-227ENST00000636549 GFPT1Q06210 699 aaPredicted RBP18.93■□□□□ 0.62
CACNA1A-227ENST00000636549 SEMA3FQ13275 785 aa18.93■□□□□ 0.62
CACNA1A-227ENST00000636549 ELMO2Q96JJ3 720 aa18.93■□□□□ 0.62
CACNA1A-227ENST00000636549 SPACA7Q96KW9 195 aa18.93■□□□□ 0.62
CACNA1A-227ENST00000636549 PIH1D3Q9NQM4 214 aaKnown RBP18.93■□□□□ 0.62
CACNA1A-227ENST00000636549 MAD2L2Q9UI95 211 aa18.93■□□□□ 0.62
CACNA1A-227ENST00000636549 CARMIL3Q8ND23 1372 aa18.93■□□□□ 0.62
CACNA1A-227ENST00000636549 ANKRD65E5RJM6 399 aa18.93■□□□□ 0.62
CACNA1A-227ENST00000636549 APPL2Q8NEU8 664 aa18.93■□□□□ 0.62
CACNA1A-227ENST00000636549 SUPT3HO75486 399 aa18.92■□□□□ 0.62
CACNA1A-227ENST00000636549 FGGP02679 453 aa18.92■□□□□ 0.62
CACNA1A-227ENST00000636549 SFR1Q86XK3 245 aa18.92■□□□□ 0.62
CACNA1A-227ENST00000636549 ZMYND12Q9H0C1 365 aa18.92■□□□□ 0.62
CACNA1A-227ENST00000636549 ASNSD1Q9NWL6 643 aa18.92■□□□□ 0.62
CACNA1A-227ENST00000636549 SCOCQ9UIL1 159 aa18.92■□□□□ 0.62
CACNA1A-227ENST00000636549 TADA3O75528 432 aa18.92■□□□□ 0.62
CACNA1A-227ENST00000636549 ZNF658Q5TYW1 1059 aaPredicted RBP18.92■□□□□ 0.62
CACNA1A-227ENST00000636549 ADNPQ9H2P0 1102 aa18.92■□□□□ 0.62
CACNA1A-227ENST00000636549 DTNAQ9Y4J8 743 aa18.92■□□□□ 0.62
CACNA1A-227ENST00000636549 LTKP29376 864 aa18.92■□□□□ 0.62
CACNA1A-227ENST00000636549 GYS2P54840 703 aa18.92■□□□□ 0.62
CACNA1A-227ENST00000636549 ARHGEF7Q14155 803 aa18.92■□□□□ 0.62
CACNA1A-227ENST00000636549 FBXO41Q8TF61 875 aa18.92■□□□□ 0.62
CACNA1A-227ENST00000636549 TMEM143Q96AN5 459 aa18.92■□□□□ 0.62
CACNA1A-227ENST00000636549 FAM118BQ9BPY3 351 aa18.92■□□□□ 0.62
CACNA1A-227ENST00000636549 ELAC2Q9BQ52 826 aaKnown RBP18.92■□□□□ 0.62
CACNA1A-227ENST00000636549 ACAD11Q709F0 780 aa18.92■□□□□ 0.62
CACNA1A-227ENST00000636549 NRBF2Q96F24 287 aa18.92■□□□□ 0.62
CACNA1A-227ENST00000636549 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.92■□□□□ 0.62
CACNA1A-227ENST00000636549 NUP85Q9BW27 656 aa18.92■□□□□ 0.62
CACNA1A-227ENST00000636549 PCDHGB4Q9UN71 923 aa18.92■□□□□ 0.62
CACNA1A-227ENST00000636549 POTEFA5A3E0 1075 aa18.92■□□□□ 0.62
CACNA1A-227ENST00000636549 PFKFB2O60825 505 aa18.92■□□□□ 0.62
CACNA1A-227ENST00000636549 BBOX1O75936 387 aa18.92■□□□□ 0.62
CACNA1A-227ENST00000636549 POTEIP0CG38 1075 aa18.92■□□□□ 0.62
CACNA1A-227ENST00000636549 LRRC14Q15048 493 aa18.92■□□□□ 0.62
CACNA1A-227ENST00000636549 ITPRIPL1Q6GPH6 555 aa18.92■□□□□ 0.62
CACNA1A-227ENST00000636549 POTEGQ6S5H5 508 aa18.92■□□□□ 0.62
CACNA1A-227ENST00000636549 POTEEQ6S8J3 1075 aa18.92■□□□□ 0.62
CACNA1A-227ENST00000636549 NFKBIZQ9BYH8 718 aa18.92■□□□□ 0.62
CACNA1A-227ENST00000636549 GGT7Q9UJ14 662 aa18.92■□□□□ 0.62
CACNA1A-227ENST00000636549 TTLL13PA6NNM8 815 aa18.92■□□□□ 0.62
CACNA1A-227ENST00000636549 TXNP10599 105 aaKnown RBP18.92■□□□□ 0.62
CACNA1A-227ENST00000636549 PDAP1Q13442 181 aaKnown RBP18.92■□□□□ 0.62
CACNA1A-227ENST00000636549 GRAPQ13588 217 aa18.92■□□□□ 0.62
CACNA1A-227ENST00000636549 HEATR6Q6AI08 1181 aaKnown RBP18.92■□□□□ 0.62
CACNA1A-227ENST00000636549 GRAPLQ8TC17 118 aaPredicted RBP18.92■□□□□ 0.62
CACNA1A-227ENST00000636549 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.92■□□□□ 0.62
CACNA1A-227ENST00000636549 LZTS1Q9Y250 596 aa18.92■□□□□ 0.62
CACNA1A-227ENST00000636549 PKP3Q9Y446 797 aa18.92■□□□□ 0.62
CACNA1A-227ENST00000636549 GFAPP14136 432 aa18.91■□□□□ 0.62
CACNA1A-227ENST00000636549 CARSP49589 748 aaKnown RBP18.91■□□□□ 0.62
CACNA1A-227ENST00000636549 RALGDSQ12967 914 aa18.91■□□□□ 0.62
CACNA1A-227ENST00000636549 PPP2R3CQ969Q6 453 aa18.91■□□□□ 0.62
CACNA1A-227ENST00000636549 ACAP3Q96P50 834 aa18.91■□□□□ 0.62
CACNA1A-227ENST00000636549 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.91■□□□□ 0.62
CACNA1A-227ENST00000636549 KLK14Q9P0G3 267 aa18.91■□□□□ 0.62
CACNA1A-227ENST00000636549 PGRMC1O00264 195 aaKnown RBP18.91■□□□□ 0.62
CACNA1A-227ENST00000636549 IKBKBO14920 756 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms