RNA–Protein interactions for RNA: ENST00000636340.1

GABRA1-213, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5

Gene GABRA1, Length 2,239 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-213ENST00000636340 FLT3P36888 993 aa6.78□□□□□ -1.32
GABRA1-213ENST00000636340 SEC24CP53992 1094 aa6.78□□□□□ -1.32
GABRA1-213ENST00000636340 PSMC6P62333 389 aa6.78□□□□□ -1.32
GABRA1-213ENST00000636340 HDLBPQ00341 1268 aaKnown RBP6.78□□□□□ -1.32
GABRA1-213ENST00000636340 POU5F1Q01860 360 aaKnown RBP6.78□□□□□ -1.32
GABRA1-213ENST00000636340 KNOP1Q1ED39 458 aaKnown RBP6.78□□□□□ -1.32
GABRA1-213ENST00000636340 BMT2Q1RMZ1 405 aa6.78□□□□□ -1.32
GABRA1-213ENST00000636340 CEP85LQ5SZL2 805 aa6.78□□□□□ -1.32
GABRA1-213ENST00000636340 GPATCH4Q5T3I0 446 aaKnown RBP6.78□□□□□ -1.32
GABRA1-213ENST00000636340 C16orf46Q6P387 395 aa6.78□□□□□ -1.32
GABRA1-213ENST00000636340 ALKBH5Q6P6C2 394 aaKnown RBP6.78□□□□□ -1.32
GABRA1-213ENST00000636340 MOXD1Q6UVY6 613 aa6.78□□□□□ -1.32
GABRA1-213ENST00000636340 CATSPER3Q86XQ3 398 aa6.78□□□□□ -1.32
GABRA1-213ENST00000636340 SYT2Q8N9I0 419 aaPredicted RBP6.78□□□□□ -1.32
GABRA1-213ENST00000636340 TBC1D22AQ8WUA7 517 aa6.78□□□□□ -1.32
GABRA1-213ENST00000636340 TAF4BQ92750 862 aa6.78□□□□□ -1.32
GABRA1-213ENST00000636340 UIMC1Q96RL1 719 aa6.78□□□□□ -1.32
GABRA1-213ENST00000636340 CEP89Q96ST8 783 aa6.78□□□□□ -1.32
GABRA1-213ENST00000636340 AP1M1Q9BXS5 423 aa6.78□□□□□ -1.32
GABRA1-213ENST00000636340 SUCLA2Q9P2R7 463 aaPredicted RBP6.78□□□□□ -1.32
GABRA1-213ENST00000636340 GGA1Q9UJY5 639 aa6.78□□□□□ -1.32
GABRA1-213ENST00000636340 NOC2LQ9Y3T9 749 aaKnown RBP6.78□□□□□ -1.32
GABRA1-213ENST00000636340 MYH4Q9Y623 1939 aa6.78□□□□□ -1.32
GABRA1-213ENST00000636340 LTBP1Q14766 1721 aa6.78□□□□□ -1.32
GABRA1-213ENST00000636340 A6NHS1 94 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 MYO1FO00160 1098 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 PGRMC1O00264 195 aaKnown RBP6.77□□□□□ -1.33
GABRA1-213ENST00000636340 PDXKO00764 312 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 MEIS2O14770 477 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 MARCH6O60337 910 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 FAM107AO95990 144 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 ITGA4P13612 1032 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 NPEPPSP55786 919 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 IFI16Q16666 785 aaKnown RBP6.77□□□□□ -1.33
GABRA1-213ENST00000636340 EXOC3L4Q17RC7 722 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 MCTP2Q6DN12 878 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 PRR5LQ6MZQ0 368 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 USP17L6PQ6QN14 398 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 KCTD1Q719H9 257 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 NT5DC3Q86UY8 548 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 OTUD6BQ8N6M0 293 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 CNBD1Q8NA66 436 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 OR2W6PQ8NHA6 318 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 SLC30A5Q8TAD4 765 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 TBC1D16Q8TBP0 767 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 SLC35C1Q96A29 364 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 EMID1Q96A84 441 aaPredicted RBP6.77□□□□□ -1.33
GABRA1-213ENST00000636340 LENG9Q96B70 501 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 LRRC45Q96CN5 670 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 BORCS6Q96GS4 357 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 HES6Q96HZ4 224 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 REEP2Q9BRK0 252 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 C2orf49Q9BVC5 232 aaPredicted RBP6.77□□□□□ -1.33
GABRA1-213ENST00000636340 BCAS3Q9H6U6 928 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 YY1AP1Q9H869 796 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 SCHIP1Q9P0W5 487 aaPredicted RBP6.77□□□□□ -1.33
GABRA1-213ENST00000636340 ARMCX3Q9UH62 379 aaPredicted RBP6.77□□□□□ -1.33
GABRA1-213ENST00000636340 INTUQ9ULD6 942 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 TTC7AQ9ULT0 858 aaPredicted RBP6.77□□□□□ -1.33
GABRA1-213ENST00000636340 QSER1Q2KHR3 1735 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 ASTN1O14525 1302 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 GTPBP10A4D1E9 387 aaKnown RBP6.77□□□□□ -1.33
GABRA1-213ENST00000636340 CCDC188H7C350 402 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 PAEPP09466 180 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 GYS1P13807 737 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 RPA1P27694 616 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 EPS15P42566 896 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 CASP4P49662 377 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 BIRC3Q13489 604 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 PICALMQ13492 652 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 QRICH1Q2TAL8 776 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 Q4G0T1 1027 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 PPP1R26Q5T8A7 1209 aaPredicted RBP6.77□□□□□ -1.33
GABRA1-213ENST00000636340 AGBL2Q5U5Z8 902 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 MAATS1Q7Z4T9 603 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 SFR1Q86XK3 245 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 ETFBKMTQ8IXQ9 262 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 SLFN12Q8IYM2 578 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 C3orf20Q8ND61 904 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 LNX1Q8TBB1 728 aaPredicted RBP6.77□□□□□ -1.33
GABRA1-213ENST00000636340 SYT11Q9BT88 431 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 MXD3Q9BW11 206 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 ANO3Q9BYT9 981 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 TXLNGYQ9BZA5 131 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 DDX47Q9H0S4 455 aaKnown RBP6.77□□□□□ -1.33
GABRA1-213ENST00000636340 GLT8D2Q9H1C3 349 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 SLITRK6Q9H5Y7 841 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 LRRC4CQ9HCJ2 640 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 CNOT8Q9UFF9 292 aaKnown RBP6.77□□□□□ -1.33
GABRA1-213ENST00000636340 SERPINB13Q9UIV8 391 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 CAPN7Q9Y6W3 813 aa6.77□□□□□ -1.33
GABRA1-213ENST00000636340 C5orf60A6NFR6 353 aa6.76□□□□□ -1.33
GABRA1-213ENST00000636340 GCOM1H8Y6P7 765 aaPredicted RBP6.76□□□□□ -1.33
GABRA1-213ENST00000636340 MEIS1O00470 390 aa6.76□□□□□ -1.33
GABRA1-213ENST00000636340 KRIT1O00522 736 aa6.76□□□□□ -1.33
GABRA1-213ENST00000636340 TBX3O15119 743 aa6.76□□□□□ -1.33
GABRA1-213ENST00000636340 SLC16A3O15427 465 aaKnown RBP6.76□□□□□ -1.33
GABRA1-213ENST00000636340 DDX3YO15523 660 aaKnown RBP6.76□□□□□ -1.33
GABRA1-213ENST00000636340 DAPK3O43293 454 aa6.76□□□□□ -1.33
GABRA1-213ENST00000636340 TRAPPC3O43617 180 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms