RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 ZBTB10Q96DT7 871 aa8.29□□□□□ -1.08
CIITA-214ENST00000636238 IGSF21Q96ID5 467 aa8.29□□□□□ -1.08
CIITA-214ENST00000636238 SHDQ96IW2 340 aa8.29□□□□□ -1.08
CIITA-214ENST00000636238 INO80BQ9C086 356 aaPredicted RBP8.29□□□□□ -1.08
CIITA-214ENST00000636238 ADAMTS10Q9H324 1103 aa8.29□□□□□ -1.08
CIITA-214ENST00000636238 ZSCAN16Q9H4T2 348 aaPredicted RBP8.29□□□□□ -1.08
CIITA-214ENST00000636238 CDHR5Q9HBB8 845 aa8.29□□□□□ -1.08
CIITA-214ENST00000636238 RIC8AQ9NPQ8 531 aa8.29□□□□□ -1.08
CIITA-214ENST00000636238 PKD2L1Q9P0L9 805 aa8.29□□□□□ -1.08
CIITA-214ENST00000636238 FBXO4Q9UKT5 387 aa8.29□□□□□ -1.08
CIITA-214ENST00000636238 ATP6V1DQ9Y5K8 247 aa8.29□□□□□ -1.08
CIITA-214ENST00000636238 ADAMTS3O15072 1205 aa8.28□□□□□ -1.08
CIITA-214ENST00000636238 PI15O43692 258 aa8.28□□□□□ -1.08
CIITA-214ENST00000636238 TRAK2O60296 914 aa8.28□□□□□ -1.08
CIITA-214ENST00000636238 CCNE2O96020 404 aa8.28□□□□□ -1.08
CIITA-214ENST00000636238 PSAPP07602 524 aa8.28□□□□□ -1.08
CIITA-214ENST00000636238 CYP3A4P08684 503 aa8.28□□□□□ -1.08
CIITA-214ENST00000636238 EPCAMP16422 314 aa8.28□□□□□ -1.08
CIITA-214ENST00000636238 RFX1P22670 979 aa8.28□□□□□ -1.08
CIITA-214ENST00000636238 CEBPZQ03701 1054 aaKnown RBP8.28□□□□□ -1.08
CIITA-214ENST00000636238 GNL2Q13823 731 aaKnown RBP8.28□□□□□ -1.08
CIITA-214ENST00000636238 PTPN14Q15678 1187 aa8.28□□□□□ -1.08
CIITA-214ENST00000636238 UBE2SQ16763 222 aa8.28□□□□□ -1.08
CIITA-214ENST00000636238 PFKFB3Q16875 520 aaPredicted RBP8.28□□□□□ -1.08
CIITA-214ENST00000636238 RSPO2Q6UXX9 243 aaPredicted RBP8.28□□□□□ -1.08
CIITA-214ENST00000636238 C1orf210Q8IVY1 113 aa8.28□□□□□ -1.08
CIITA-214ENST00000636238 CCDC60Q8IWA6 550 aaPredicted RBP8.28□□□□□ -1.08
CIITA-214ENST00000636238 OXER1Q8TDS5 423 aa8.28□□□□□ -1.08
CIITA-214ENST00000636238 SECISBP2LQ93073 1101 aaKnown RBP8.28□□□□□ -1.08
CIITA-214ENST00000636238 TMEM175Q9BSA9 504 aa8.28□□□□□ -1.08
CIITA-214ENST00000636238 OSBPL6Q9BZF3 934 aa8.28□□□□□ -1.08
CIITA-214ENST00000636238 WDR6Q9NNW5 1121 aaKnown RBP8.28□□□□□ -1.08
CIITA-214ENST00000636238 SLC2A4RGQ9NR83 387 aa8.28□□□□□ -1.08
CIITA-214ENST00000636238 NRBP2Q9NSY0 501 aa8.28□□□□□ -1.08
CIITA-214ENST00000636238 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.28□□□□□ -1.08
CIITA-214ENST00000636238 KANSL3Q9P2N6 904 aa8.28□□□□□ -1.08
CIITA-214ENST00000636238 HCSTQ9UBK5 93 aa8.28□□□□□ -1.08
CIITA-214ENST00000636238 PCDHA10Q9Y5I2 948 aa8.28□□□□□ -1.08
CIITA-214ENST00000636238 MYH7BA7E2Y1 1941 aa8.28□□□□□ -1.08
CIITA-214ENST00000636238 BTBD18B2RXH4 712 aa8.27□□□□□ -1.09
CIITA-214ENST00000636238 RBAK-RBAKDNI3L0D1 243 aa8.27□□□□□ -1.09
CIITA-214ENST00000636238 IPO5O00410 1097 aaKnown RBP8.27□□□□□ -1.09
CIITA-214ENST00000636238 DHX15O43143 795 aaKnown RBP8.27□□□□□ -1.09
CIITA-214ENST00000636238 KINO60870 393 aaKnown RBP8.27□□□□□ -1.09
CIITA-214ENST00000636238 ADH1AP07327 375 aa8.27□□□□□ -1.09
CIITA-214ENST00000636238 SP9P0CG40 484 aa8.27□□□□□ -1.09
CIITA-214ENST00000636238 ARP10275 920 aa8.27□□□□□ -1.09
CIITA-214ENST00000636238 SFPQP23246 707 aaKnown RBP eCLIP8.27□□□□□ -1.09
CIITA-214ENST00000636238 PHKA2P46019 1235 aa8.27□□□□□ -1.09
CIITA-214ENST00000636238 CLCN4P51793 760 aa8.27□□□□□ -1.09
CIITA-214ENST00000636238 ADCY7P51828 1080 aa8.27□□□□□ -1.09
CIITA-214ENST00000636238 NLRP11P59045 1033 aaKnown RBP8.27□□□□□ -1.09
CIITA-214ENST00000636238 KRT85P78386 507 aa8.27□□□□□ -1.09
CIITA-214ENST00000636238 LMNB2Q03252 620 aa8.27□□□□□ -1.09
CIITA-214ENST00000636238 NR5A1Q13285 461 aa8.27□□□□□ -1.09
CIITA-214ENST00000636238 SAFBQ15424 915 aaKnown RBP eCLIP8.27□□□□□ -1.09
CIITA-214ENST00000636238 NOMO2Q5JPE7 1267 aa8.27□□□□□ -1.09
CIITA-214ENST00000636238 KIAA0319Q5VV43 1072 aa8.27□□□□□ -1.09
CIITA-214ENST00000636238 SWSAP1Q6NVH7 229 aa8.27□□□□□ -1.09
CIITA-214ENST00000636238 TMC5Q6UXY8 1006 aa8.27□□□□□ -1.09
CIITA-214ENST00000636238 HEATR3Q7Z4Q2 680 aa8.27□□□□□ -1.09
CIITA-214ENST00000636238 ZNF410Q86VK4 478 aa8.27□□□□□ -1.09
CIITA-214ENST00000636238 CKAP2LQ8IYA6 745 aa8.27□□□□□ -1.09
CIITA-214ENST00000636238 DIS3L2Q8IYB7 885 aaKnown RBP8.27□□□□□ -1.09
CIITA-214ENST00000636238 KIAA2013Q8IYS2 634 aa8.27□□□□□ -1.09
CIITA-214ENST00000636238 METTL13Q8N6R0 699 aa8.27□□□□□ -1.09
CIITA-214ENST00000636238 C12orf76Q8N812 135 aaPredicted RBP8.27□□□□□ -1.09
CIITA-214ENST00000636238 PGBD4Q96DM1 585 aa8.27□□□□□ -1.09
CIITA-214ENST00000636238 PHF20Q9BVI0 1012 aa8.27□□□□□ -1.09
CIITA-214ENST00000636238 ANO3Q9BYT9 981 aa8.27□□□□□ -1.09
CIITA-214ENST00000636238 GCOM2Q9BZD3 368 aaPredicted RBP8.27□□□□□ -1.09
CIITA-214ENST00000636238 SMOC2Q9H3U7 446 aa8.27□□□□□ -1.09
CIITA-214ENST00000636238 PLEKHA4Q9H4M7 779 aa8.27□□□□□ -1.09
CIITA-214ENST00000636238 TBC1D17Q9HA65 648 aa8.27□□□□□ -1.09
CIITA-214ENST00000636238 MRPL17Q9NRX2 175 aaKnown RBP8.27□□□□□ -1.09
CIITA-214ENST00000636238 DLGAP2Q9P1A6 1054 aa8.27□□□□□ -1.09
CIITA-214ENST00000636238 AKT3Q9Y243 479 aa8.27□□□□□ -1.09
CIITA-214ENST00000636238 SIT1Q9Y3P8 196 aa8.27□□□□□ -1.09
CIITA-214ENST00000636238 PCDHGA2Q9Y5H1 932 aa8.27□□□□□ -1.09
CIITA-214ENST00000636238 CHD8Q9HCK8 2581 aa8.27□□□□□ -1.09
CIITA-214ENST00000636238 CNTNAP2Q9UHC6 1331 aa8.27□□□□□ -1.09
CIITA-214ENST00000636238 GPR179Q6PRD1 2367 aa8.26□□□□□ -1.09
CIITA-214ENST00000636238 FAM205CA6NFA0 338 aa8.26□□□□□ -1.09
CIITA-214ENST00000636238 SPDYE4A6NLX3 237 aa8.26□□□□□ -1.09
CIITA-214ENST00000636238 WDR64B1ANS9 1081 aa8.26□□□□□ -1.09
CIITA-214ENST00000636238 FOXD2O60548 495 aaPredicted RBP8.26□□□□□ -1.09
CIITA-214ENST00000636238 LILRB3O75022 631 aa8.26□□□□□ -1.09
CIITA-214ENST00000636238 ZC3H11AO75152 810 aaKnown RBP eCLIP8.26□□□□□ -1.09
CIITA-214ENST00000636238 VTNP04004 478 aa8.26□□□□□ -1.09
CIITA-214ENST00000636238 GALTP07902 379 aa8.26□□□□□ -1.09
CIITA-214ENST00000636238 XBP1P17861 261 aa8.26□□□□□ -1.09
CIITA-214ENST00000636238 ATP4AP20648 1035 aa8.26□□□□□ -1.09
CIITA-214ENST00000636238 IBSPP21815 317 aaPredicted RBP8.26□□□□□ -1.09
CIITA-214ENST00000636238 KLRC2P26717 231 aa8.26□□□□□ -1.09
CIITA-214ENST00000636238 SFNP31947 248 aa8.26□□□□□ -1.09
CIITA-214ENST00000636238 ZNF76P36508 570 aa8.26□□□□□ -1.09
CIITA-214ENST00000636238 PBX3P40426 434 aa8.26□□□□□ -1.09
CIITA-214ENST00000636238 CLK2P49760 499 aaKnown RBP8.26□□□□□ -1.09
CIITA-214ENST00000636238 GPC3P51654 580 aa8.26□□□□□ -1.09
CIITA-214ENST00000636238 NLRP5P59047 1200 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms