RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 TRIM6Q9C030 488 aaPredicted RBP21.05■□□□□ 0.96
CLN6-213ENST00000636212 GBP3Q9H0R5 595 aa21.05■□□□□ 0.96
CLN6-213ENST00000636212 POLR3FQ9H1D9 316 aaPredicted RBP21.05■□□□□ 0.96
CLN6-213ENST00000636212 TBC1D13Q9NVG8 400 aa21.05■□□□□ 0.96
CLN6-213ENST00000636212 ARHGEF35A5YM69 484 aa21.04■□□□□ 0.96
CLN6-213ENST00000636212 NT5C1B-RDH14C9J2C7 533 aa21.04■□□□□ 0.96
CLN6-213ENST00000636212 MED24O75448 989 aa21.04■□□□□ 0.96
CLN6-213ENST00000636212 OFD1O75665 1012 aa21.04■□□□□ 0.96
CLN6-213ENST00000636212 SPATA31C1P0DKV0 1188 aa21.04■□□□□ 0.96
CLN6-213ENST00000636212 ITGA4P13612 1032 aa21.04■□□□□ 0.96
CLN6-213ENST00000636212 U2AF2P26368 475 aaKnown RBP eCLIP21.04■□□□□ 0.96
CLN6-213ENST00000636212 ARL2P36404 184 aa21.04■□□□□ 0.96
CLN6-213ENST00000636212 MCM2P49736 904 aa21.04■□□□□ 0.96
CLN6-213ENST00000636212 COASYQ13057 564 aa21.04■□□□□ 0.96
CLN6-213ENST00000636212 CAPSQ13938 189 aa21.04■□□□□ 0.96
CLN6-213ENST00000636212 MRPL10Q7Z7H8 261 aaKnown RBP21.04■□□□□ 0.96
CLN6-213ENST00000636212 MSLNLQ96KJ4 702 aa21.04■□□□□ 0.96
CLN6-213ENST00000636212 NFKBIZQ9BYH8 718 aa21.04■□□□□ 0.96
CLN6-213ENST00000636212 STK39Q9UEW8 545 aa21.04■□□□□ 0.96
CLN6-213ENST00000636212 BARX2Q9UMQ3 279 aaPredicted RBP21.04■□□□□ 0.96
CLN6-213ENST00000636212 BRWD1Q9NSI6 2320 aa21.04■□□□□ 0.96
CLN6-213ENST00000636212 LRRIQ4A6NIV6 560 aa21.03■□□□□ 0.96
CLN6-213ENST00000636212 TSPAN1O60635 241 aa21.03■□□□□ 0.96
CLN6-213ENST00000636212 ALADP13716 330 aa21.03■□□□□ 0.96
CLN6-213ENST00000636212 NCLP19338 710 aaKnown RBP21.03■□□□□ 0.96
CLN6-213ENST00000636212 HOXA11P31270 313 aaPredicted RBP21.03■□□□□ 0.96
CLN6-213ENST00000636212 CCT6AP40227 531 aaKnown RBP21.03■□□□□ 0.96
CLN6-213ENST00000636212 ZP2Q05996 745 aa21.03■□□□□ 0.96
CLN6-213ENST00000636212 MCTP1Q6DN14 999 aa21.03■□□□□ 0.96
CLN6-213ENST00000636212 MAEAQ7L5Y9 396 aa21.03■□□□□ 0.96
CLN6-213ENST00000636212 ZBTB8OSQ8IWT0 167 aa21.03■□□□□ 0.96
CLN6-213ENST00000636212 ASAP3Q8TDY4 903 aa21.03■□□□□ 0.96
CLN6-213ENST00000636212 EPHX3Q9H6B9 360 aa21.03■□□□□ 0.96
CLN6-213ENST00000636212 CD320Q9NPF0 282 aa21.03■□□□□ 0.96
CLN6-213ENST00000636212 CLEC1BQ9P126 229 aa21.03■□□□□ 0.96
CLN6-213ENST00000636212 LRWD1Q9UFC0 647 aa21.03■□□□□ 0.96
CLN6-213ENST00000636212 A0A087WWV3 80 aa21.02■□□□□ 0.96
CLN6-213ENST00000636212 LAD1O00515 517 aa21.02■□□□□ 0.96
CLN6-213ENST00000636212 EYA4O95677 639 aa21.02■□□□□ 0.96
CLN6-213ENST00000636212 GLRA2P23416 452 aa21.02■□□□□ 0.96
CLN6-213ENST00000636212 FXR2P51116 673 aaKnown RBP eCLIP21.02■□□□□ 0.96
CLN6-213ENST00000636212 GIT2Q14161 759 aa21.02■□□□□ 0.96
CLN6-213ENST00000636212 TMEM31Q5JXX7 168 aa21.02■□□□□ 0.96
CLN6-213ENST00000636212 UBXN11Q5T124 520 aa21.02■□□□□ 0.96
CLN6-213ENST00000636212 POTEGQ6S5H5 508 aa21.02■□□□□ 0.96
CLN6-213ENST00000636212 AGMOQ6ZNB7 445 aa21.02■□□□□ 0.96
CLN6-213ENST00000636212 SMRP1Q8NCR6 262 aa21.02■□□□□ 0.96
CLN6-213ENST00000636212 CPB2Q96IY4 423 aa21.02■□□□□ 0.96
CLN6-213ENST00000636212 CSRNP2Q9H175 543 aa21.02■□□□□ 0.96
CLN6-213ENST00000636212 NRDE2Q9H7Z3 1164 aa21.02■□□□□ 0.96
CLN6-213ENST00000636212 MYO7AQ13402 2215 aa21.02■□□□□ 0.96
CLN6-213ENST00000636212 MEIS3P2A8K0S8 358 aa21.01■□□□□ 0.95
CLN6-213ENST00000636212 PI4K2BG5E9Z4 385 aa21.01■□□□□ 0.95
CLN6-213ENST00000636212 H3BQV1 296 aa21.01■□□□□ 0.95
CLN6-213ENST00000636212 CXCL14O95715 111 aa21.01■□□□□ 0.95
CLN6-213ENST00000636212 GLP2RO95838 553 aa21.01■□□□□ 0.95
CLN6-213ENST00000636212 ALDH2P05091 517 aa21.01■□□□□ 0.95
CLN6-213ENST00000636212 COL9A1P20849 921 aa21.01■□□□□ 0.95
CLN6-213ENST00000636212 MBTD1Q05BQ5 628 aa21.01■□□□□ 0.95
CLN6-213ENST00000636212 PDIA5Q14554 519 aa21.01■□□□□ 0.95
CLN6-213ENST00000636212 TMEM132AQ24JP5 1023 aa21.01■□□□□ 0.95
CLN6-213ENST00000636212 VPS52Q8N1B4 723 aa21.01■□□□□ 0.95
CLN6-213ENST00000636212 MRPL43Q8N983 215 aaKnown RBP21.01■□□□□ 0.95
CLN6-213ENST00000636212 CASP10Q92851 521 aa21.01■□□□□ 0.95
CLN6-213ENST00000636212 IGSF21Q96ID5 467 aa21.01■□□□□ 0.95
CLN6-213ENST00000636212 TMX3Q96JJ7 454 aa21.01■□□□□ 0.95
CLN6-213ENST00000636212 C2orf40Q9H1Z8 148 aa21.01■□□□□ 0.95
CLN6-213ENST00000636212 PRMT7Q9NVM4 692 aaPredicted RBP21.01■□□□□ 0.95
CLN6-213ENST00000636212 IPPQ9Y573 584 aa21.01■□□□□ 0.95
CLN6-213ENST00000636212 HIDE1A8MVS5 230 aa21■□□□□ 0.95
CLN6-213ENST00000636212 NR1I2O75469 434 aa21■□□□□ 0.95
CLN6-213ENST00000636212 GALTP07902 379 aa21■□□□□ 0.95
CLN6-213ENST00000636212 PTGDRQ13258 359 aa21■□□□□ 0.95
CLN6-213ENST00000636212 PPP2R5AQ15172 486 aa21■□□□□ 0.95
CLN6-213ENST00000636212 LLGL2Q6P1M3 1020 aa21■□□□□ 0.95
CLN6-213ENST00000636212 PADI6Q6TGC4 694 aa21■□□□□ 0.95
CLN6-213ENST00000636212 DDX53Q86TM3 631 aaKnown RBP21■□□□□ 0.95
CLN6-213ENST00000636212 PRIMPOLQ96LW4 560 aa21■□□□□ 0.95
CLN6-213ENST00000636212 TMEM175Q9BSA9 504 aa21■□□□□ 0.95
CLN6-213ENST00000636212 FAN1Q9Y2M0 1017 aa21■□□□□ 0.95
CLN6-213ENST00000636212 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.99■□□□□ 0.95
CLN6-213ENST00000636212 C19orf67A6NJJ6 358 aa20.99■□□□□ 0.95
CLN6-213ENST00000636212 ARF4P18085 180 aaPredicted RBP20.99■□□□□ 0.95
CLN6-213ENST00000636212 NBR1Q14596 966 aa20.99■□□□□ 0.95
CLN6-213ENST00000636212 RILPL1Q5EBL4 403 aa20.99■□□□□ 0.95
CLN6-213ENST00000636212 SLC27A1Q6PCB7 646 aa20.99■□□□□ 0.95
CLN6-213ENST00000636212 TMEM184AQ6ZMB5 413 aa20.99■□□□□ 0.95
CLN6-213ENST00000636212 SMG8Q8ND04 991 aaKnown RBP20.99■□□□□ 0.95
CLN6-213ENST00000636212 SNX29Q8TEQ0 813 aa20.99■□□□□ 0.95
CLN6-213ENST00000636212 IFT74Q96LB3 600 aa20.99■□□□□ 0.95
CLN6-213ENST00000636212 EIF2AQ9BY44 585 aaKnown RBP20.99■□□□□ 0.95
CLN6-213ENST00000636212 GPRC5CQ9NQ84 441 aa20.99■□□□□ 0.95
CLN6-213ENST00000636212 DNAJB4Q9UDY4 337 aa20.99■□□□□ 0.95
CLN6-213ENST00000636212 USP15Q9Y4E8 981 aaPredicted RBP20.99■□□□□ 0.95
CLN6-213ENST00000636212 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.99■□□□□ 0.95
CLN6-213ENST00000636212 PCDHB6Q9Y5E3 794 aa20.99■□□□□ 0.95
CLN6-213ENST00000636212 C2orf71A6NGG8 1288 aa20.98■□□□□ 0.95
CLN6-213ENST00000636212 POMCP01189 267 aa20.98■□□□□ 0.95
CLN6-213ENST00000636212 HOXB8P17481 243 aaPredicted RBP20.98■□□□□ 0.95
CLN6-213ENST00000636212 CYP11B2P19099 503 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms