RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 GUCD1Q96NT3 240 aa15.45■□□□□ 0.06
SNRPA1-216ENST00000626000 NTPCRQ9BSD7 190 aaKnown RBP15.45■□□□□ 0.06
SNRPA1-216ENST00000626000 RUSC1Q9BVN2 902 aa15.45■□□□□ 0.06
SNRPA1-216ENST00000626000 FZD8Q9H461 694 aa15.45■□□□□ 0.06
SNRPA1-216ENST00000626000 TMEM134Q9H6X4 195 aa15.45■□□□□ 0.06
SNRPA1-216ENST00000626000 MINDY3Q9H8M7 445 aa15.45■□□□□ 0.06
SNRPA1-216ENST00000626000 KMT5AQ9NQR1 393 aa15.45■□□□□ 0.06
SNRPA1-216ENST00000626000 RCOR1Q9UKL0 485 aa15.45■□□□□ 0.06
SNRPA1-216ENST00000626000 MYH11P35749 1972 aa15.44■□□□□ 0.06
SNRPA1-216ENST00000626000 LCHNA4D1U4 455 aa15.44■□□□□ 0.06
SNRPA1-216ENST00000626000 CCDC169A6NNP5 214 aa15.44■□□□□ 0.06
SNRPA1-216ENST00000626000 C5orf67F2Z3F1 127 aa15.44■□□□□ 0.06
SNRPA1-216ENST00000626000 K7ERI5 159 aa15.44■□□□□ 0.06
SNRPA1-216ENST00000626000 CSDE1O75534 798 aaKnown RBP15.44■□□□□ 0.06
SNRPA1-216ENST00000626000 LAG3P18627 525 aa15.44■□□□□ 0.06
SNRPA1-216ENST00000626000 POU3F3P20264 500 aaPredicted RBP15.44■□□□□ 0.06
SNRPA1-216ENST00000626000 FGFR4P22455 802 aa15.44■□□□□ 0.06
SNRPA1-216ENST00000626000 HOXA11P31270 313 aaPredicted RBP15.44■□□□□ 0.06
SNRPA1-216ENST00000626000 PEX3P56589 373 aa15.44■□□□□ 0.06
SNRPA1-216ENST00000626000 AMPD3Q01432 767 aa15.44■□□□□ 0.06
SNRPA1-216ENST00000626000 STRN3Q13033 797 aa15.44■□□□□ 0.06
SNRPA1-216ENST00000626000 PRPF4BQ13523 1007 aaKnown RBP15.44■□□□□ 0.06
SNRPA1-216ENST00000626000 PKP1Q13835 747 aa15.44■□□□□ 0.06
SNRPA1-216ENST00000626000 SLC27A1Q6PCB7 646 aa15.44■□□□□ 0.06
SNRPA1-216ENST00000626000 SV2BQ7L1I2 683 aa15.44■□□□□ 0.06
SNRPA1-216ENST00000626000 ZNF598Q86UK7 904 aaKnown RBP15.44■□□□□ 0.06
SNRPA1-216ENST00000626000 TMEM192Q8IY95 271 aa15.44■□□□□ 0.06
SNRPA1-216ENST00000626000 IQUBQ8NA54 791 aa15.44■□□□□ 0.06
SNRPA1-216ENST00000626000 ARNTL2Q8WYA1 636 aa15.44■□□□□ 0.06
SNRPA1-216ENST00000626000 P2RX5Q93086 422 aa15.44■□□□□ 0.06
SNRPA1-216ENST00000626000 CLIC6Q96NY7 704 aa15.44■□□□□ 0.06
SNRPA1-216ENST00000626000 PLIN2Q99541 437 aa15.44■□□□□ 0.06
SNRPA1-216ENST00000626000 LMAN2LQ9H0V9 348 aa15.44■□□□□ 0.06
SNRPA1-216ENST00000626000 PARVGQ9HBI0 331 aa15.44■□□□□ 0.06
SNRPA1-216ENST00000626000 KANSL3Q9P2N6 904 aa15.44■□□□□ 0.06
SNRPA1-216ENST00000626000 SEL1LQ9UBV2 794 aa15.44■□□□□ 0.06
SNRPA1-216ENST00000626000 PCDHB2Q9Y5E7 798 aa15.44■□□□□ 0.06
SNRPA1-216ENST00000626000 PCDHB12Q9Y5F1 795 aa15.44■□□□□ 0.06
SNRPA1-216ENST00000626000 NLRC5Q86WI3 1866 aa15.44■□□□□ 0.06
SNRPA1-216ENST00000626000 A0A1B0GUA9 196 aa15.43■□□□□ 0.06
SNRPA1-216ENST00000626000 FAM13AO94988 1023 aa15.43■□□□□ 0.06
SNRPA1-216ENST00000626000 PRKCBP05771 671 aa15.43■□□□□ 0.06
SNRPA1-216ENST00000626000 ARF4P18085 180 aaPredicted RBP15.43■□□□□ 0.06
SNRPA1-216ENST00000626000 NCLP19338 710 aaKnown RBP15.43■□□□□ 0.06
SNRPA1-216ENST00000626000 PPM1AP35813 382 aa15.43■□□□□ 0.06
SNRPA1-216ENST00000626000 NPTX2P47972 431 aa15.43■□□□□ 0.06
SNRPA1-216ENST00000626000 DNM1Q05193 864 aaKnown RBP15.43■□□□□ 0.06
SNRPA1-216ENST00000626000 MAPK7Q13164 816 aa15.43■□□□□ 0.06
SNRPA1-216ENST00000626000 AMHR2Q16671 573 aa15.43■□□□□ 0.06
SNRPA1-216ENST00000626000 DCAF4L1Q3SXM0 396 aa15.43■□□□□ 0.06
SNRPA1-216ENST00000626000 EPC2Q52LR7 807 aa15.43■□□□□ 0.06
SNRPA1-216ENST00000626000 MRPL10Q7Z7H8 261 aaKnown RBP15.43■□□□□ 0.06
SNRPA1-216ENST00000626000 RNF169Q8NCN4 708 aa15.43■□□□□ 0.06
SNRPA1-216ENST00000626000 URGCPQ8TCY9 931 aa15.43■□□□□ 0.06
SNRPA1-216ENST00000626000 SPATA32Q96LK8 384 aa15.43■□□□□ 0.06
SNRPA1-216ENST00000626000 MRPL4Q9BYD3 311 aaKnown RBP15.43■□□□□ 0.06
SNRPA1-216ENST00000626000 CCDC113Q9H0I3 377 aa15.43■□□□□ 0.06
SNRPA1-216ENST00000626000 PRDM12Q9H4Q4 367 aa15.43■□□□□ 0.06
SNRPA1-216ENST00000626000 BLOC1S4Q9NUP1 217 aa15.43■□□□□ 0.06
SNRPA1-216ENST00000626000 ARHGAP28Q9P2N2 729 aa15.43■□□□□ 0.06
SNRPA1-216ENST00000626000 STK39Q9UEW8 545 aa15.43■□□□□ 0.06
SNRPA1-216ENST00000626000 CIZ1Q9ULV3 898 aaPredicted RBP15.43■□□□□ 0.06
SNRPA1-216ENST00000626000 MYO9BQ13459 2157 aa15.42■□□□□ 0.06
SNRPA1-216ENST00000626000 FNDC1Q4ZHG4 1894 aaPredicted RBP15.42■□□□□ 0.06
SNRPA1-216ENST00000626000 TBKBP1A7MCY6 615 aa15.42■□□□□ 0.06
SNRPA1-216ENST00000626000 H3BNC9 293 aa15.42■□□□□ 0.06
SNRPA1-216ENST00000626000 GAP43P17677 238 aa15.42■□□□□ 0.06
SNRPA1-216ENST00000626000 CTNNB1P35222 781 aa15.42■□□□□ 0.06
SNRPA1-216ENST00000626000 BMPR1AP36894 532 aa15.42■□□□□ 0.06
SNRPA1-216ENST00000626000 ZNF131P52739 623 aa15.42■□□□□ 0.06
SNRPA1-216ENST00000626000 DAW1Q8N136 415 aa15.42■□□□□ 0.06
SNRPA1-216ENST00000626000 BSNDQ8WZ55 320 aa15.42■□□□□ 0.06
SNRPA1-216ENST00000626000 TNMDQ9H2S6 317 aa15.42■□□□□ 0.06
SNRPA1-216ENST00000626000 USP25Q9UHP3 1055 aa15.42■□□□□ 0.06
SNRPA1-216ENST00000626000 SZT2Q5T011 3432 aa15.42■□□□□ 0.06
SNRPA1-216ENST00000626000 MAPTP10636 758 aaKnown RBP15.41■□□□□ 0.06
SNRPA1-216ENST00000626000 ITGA4P13612 1032 aa15.41■□□□□ 0.06
SNRPA1-216ENST00000626000 UBE3AQ05086 875 aa15.41■□□□□ 0.06
SNRPA1-216ENST00000626000 MCM6Q14566 821 aa15.41■□□□□ 0.06
SNRPA1-216ENST00000626000 SPECC1Q5M775 1068 aa15.41■□□□□ 0.06
SNRPA1-216ENST00000626000 SPOUT1Q5T280 376 aaKnown RBP15.41■□□□□ 0.06
SNRPA1-216ENST00000626000 ADALQ6DHV7 355 aa15.41■□□□□ 0.06
SNRPA1-216ENST00000626000 MYLIPQ8WY64 445 aa15.41■□□□□ 0.06
SNRPA1-216ENST00000626000 CCDC34Q96HJ3 373 aa15.41■□□□□ 0.06
SNRPA1-216ENST00000626000 REEP2Q9BRK0 252 aa15.41■□□□□ 0.06
SNRPA1-216ENST00000626000 RSAD1Q9HA92 442 aa15.41■□□□□ 0.06
SNRPA1-216ENST00000626000 GIT1Q9Y2X7 761 aa15.41■□□□□ 0.06
SNRPA1-216ENST00000626000 MRPL42Q9Y6G3 142 aaKnown RBP15.41■□□□□ 0.06
SNRPA1-216ENST00000626000 FGFR1P11362 822 aa15.4■□□□□ 0.06
SNRPA1-216ENST00000626000 ATF7P17544 494 aaPredicted RBP15.4■□□□□ 0.06
SNRPA1-216ENST00000626000 IBSPP21815 317 aaPredicted RBP15.4■□□□□ 0.06
SNRPA1-216ENST00000626000 ALCAMQ13740 583 aa15.4■□□□□ 0.06
SNRPA1-216ENST00000626000 DHX8Q14562 1220 aaKnown RBP15.4■□□□□ 0.06
SNRPA1-216ENST00000626000 FOXD4L6Q3SYB3 417 aaPredicted RBP15.4■□□□□ 0.06
SNRPA1-216ENST00000626000 PAN2Q504Q3 1202 aaKnown RBP15.4■□□□□ 0.06
SNRPA1-216ENST00000626000 TIGD5Q53EQ6 642 aa15.4■□□□□ 0.06
SNRPA1-216ENST00000626000 ARSHQ5FYA8 562 aa15.4■□□□□ 0.06
SNRPA1-216ENST00000626000 NOMO2Q5JPE7 1267 aa15.4■□□□□ 0.06
SNRPA1-216ENST00000626000 AXDND1Q5T1B0 1012 aaPredicted RBP15.4■□□□□ 0.06
SNRPA1-216ENST00000626000 FOXD4L3Q6VB84 417 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms