RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 SLC16A1P53985 500 aa3.59□□□□□ -1.83
SCARNA4-202ENST00000625402 USP14P54578 494 aa3.59□□□□□ -1.83
SCARNA4-202ENST00000625402 RRADP55042 308 aa3.59□□□□□ -1.83
SCARNA4-202ENST00000625402 ADAM8P78325 824 aa3.59□□□□□ -1.83
SCARNA4-202ENST00000625402 ACAP1Q15027 740 aa3.59□□□□□ -1.83
SCARNA4-202ENST00000625402 CCSAPQ6IQ19 270 aaPredicted RBP3.59□□□□□ -1.83
SCARNA4-202ENST00000625402 CLEC14AQ86T13 490 aa3.59□□□□□ -1.83
SCARNA4-202ENST00000625402 UNC5BQ8IZJ1 945 aa3.59□□□□□ -1.83
SCARNA4-202ENST00000625402 FATE1Q969F0 183 aa3.59□□□□□ -1.83
SCARNA4-202ENST00000625402 AJUBAQ96IF1 538 aa3.59□□□□□ -1.83
SCARNA4-202ENST00000625402 L2HGDHQ9H9P8 463 aa3.59□□□□□ -1.83
SCARNA4-202ENST00000625402 GEMIN8Q9NWZ8 242 aaKnown RBP3.59□□□□□ -1.83
SCARNA4-202ENST00000625402 NTMQ9P121 344 aa3.59□□□□□ -1.83
SCARNA4-202ENST00000625402 INTUQ9ULD6 942 aa3.59□□□□□ -1.83
SCARNA4-202ENST00000625402 SMG5Q9UPR3 1016 aaKnown RBP3.59□□□□□ -1.83
SCARNA4-202ENST00000625402 ADAMTS20P59510 1910 aa3.59□□□□□ -1.83
SCARNA4-202ENST00000625402 GOLGA6CA6NDK9 693 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 GOLGA6BA6NDN3 693 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 TCAF2A6NFQ2 919 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 LRRC14BA6NHZ5 514 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 ERC2O15083 957 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 PAX4O43316 350 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 PRAMEF4O60810 478 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 CYP7B1O75881 506 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 TSPAN15O95858 294 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 LTA4HP09960 611 aaKnown RBP3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 GOLGA6DP0CG33 693 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 VCAM1P19320 739 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 XPAP23025 273 aaPredicted RBP3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 NRG3P56975 720 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 CAP1Q01518 475 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 MEF2AQ02078 507 aaPredicted RBP3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 DSC2Q02487 901 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 TARDBPQ13148 414 aaKnown RBP eCLIP3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 NOMO1Q15155 1222 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 UBE3CQ15386 1083 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 VMACQ2NL98 169 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 PGS1Q32NB8 556 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 ARHGAP29Q52LW3 1261 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 AGBL4Q5VU57 503 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 MCTP2Q6DN12 878 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 SWSAP1Q6NVH7 229 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 KLHDC10Q6PID8 442 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 SLC4A10Q6U841 1118 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 ZNF761Q86XN6 746 aaPredicted RBP3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 REXO1L1PQ8IX06 675 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 CARFQ8N187 725 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 ZGPATQ8N5A5 531 aaKnown RBP3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 FBXO18Q8NFZ0 1043 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 ADAMTS17Q8TE56 1095 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 SLC39A13Q96H72 371 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 FAM84AQ96KN4 292 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 MAP3K14Q99558 947 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 PDCD2LQ9BRP1 358 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 LRFN3Q9BTN0 628 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 ADI1Q9BV57 179 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 OSBPL6Q9BZF3 934 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 TLR9Q9NR96 1032 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 RBM12Q9NTZ6 932 aaKnown RBP3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 ING3Q9NXR8 418 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 GOLGA6AQ9NYA3 693 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 TRPS1Q9UHF7 1281 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 SAP30BPQ9UHR5 308 aaKnown RBP3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 ADAM29Q9UKF5 820 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 CNOT6Q9ULM6 557 aaKnown RBP3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 RNF114Q9Y508 228 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 CTDP1Q9Y5B0 961 aaPredicted RBP3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 PCDHB1Q9Y5F3 818 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 PCDHA13Q9Y5I0 950 aa3.58□□□□□ -1.84
SCARNA4-202ENST00000625402 NPIPB6E9PJ23 425 aa3.57□□□□□ -1.84
SCARNA4-202ENST00000625402 MAFGO15525 162 aa3.57□□□□□ -1.84
SCARNA4-202ENST00000625402 ALDH1A2O94788 518 aa3.57□□□□□ -1.84
SCARNA4-202ENST00000625402 U2AF1L5P0DN76 240 aaPredicted RBP3.57□□□□□ -1.84
SCARNA4-202ENST00000625402 GSPT1P15170 499 aaKnown RBP3.57□□□□□ -1.84
SCARNA4-202ENST00000625402 ADSLP30566 484 aaPredicted RBP3.57□□□□□ -1.84
SCARNA4-202ENST00000625402 U2AF1Q01081 240 aaKnown RBP eCLIP3.57□□□□□ -1.84
SCARNA4-202ENST00000625402 HGFACQ04756 655 aa3.57□□□□□ -1.84
SCARNA4-202ENST00000625402 SAFB2Q14151 953 aaKnown RBP eCLIP3.57□□□□□ -1.84
SCARNA4-202ENST00000625402 KCNA10Q16322 511 aa3.57□□□□□ -1.84
SCARNA4-202ENST00000625402 FRMPD2Q68DX3 1309 aaPredicted RBP3.57□□□□□ -1.84
SCARNA4-202ENST00000625402 DENND1CQ8IV53 801 aa3.57□□□□□ -1.84
SCARNA4-202ENST00000625402 RTKN2Q8IZC4 609 aa3.57□□□□□ -1.84
SCARNA4-202ENST00000625402 IFNL2Q8IZJ0 200 aa3.57□□□□□ -1.84
SCARNA4-202ENST00000625402 TXNDC5Q8NBS9 432 aaKnown RBP3.57□□□□□ -1.84
SCARNA4-202ENST00000625402 GPR156Q8NFN8 814 aa3.57□□□□□ -1.84
SCARNA4-202ENST00000625402 OR14K1Q8NGZ2 314 aa3.57□□□□□ -1.84
SCARNA4-202ENST00000625402 PLBD2Q8NHP8 589 aa3.57□□□□□ -1.84
SCARNA4-202ENST00000625402 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.57□□□□□ -1.84
SCARNA4-202ENST00000625402 NSUN6Q8TEA1 469 aaKnown RBP3.57□□□□□ -1.84
SCARNA4-202ENST00000625402 ZNF480Q8WV37 535 aa3.57□□□□□ -1.84
SCARNA4-202ENST00000625402 SNX33Q8WV41 574 aa3.57□□□□□ -1.84
SCARNA4-202ENST00000625402 CCDC136Q96JN2 1154 aa3.57□□□□□ -1.84
SCARNA4-202ENST00000625402 FAM193BQ96PV7 902 aaPredicted RBP3.57□□□□□ -1.84
SCARNA4-202ENST00000625402 DMRTA2Q96SC8 542 aa3.57□□□□□ -1.84
SCARNA4-202ENST00000625402 B3GNT5Q9BYG0 378 aa3.57□□□□□ -1.84
SCARNA4-202ENST00000625402 LDAHQ9H6V9 325 aa3.57□□□□□ -1.84
SCARNA4-202ENST00000625402 PRDM11Q9NQV5 511 aa3.57□□□□□ -1.84
SCARNA4-202ENST00000625402 FAM184BQ9ULE4 1060 aa3.57□□□□□ -1.84
SCARNA4-202ENST00000625402 VWA7Q9Y334 891 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms