RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 ALDH2P05091 517 aa15.74■□□□□ 0.11
SNX1-214ENST00000625244 FSHRP23945 695 aa15.74■□□□□ 0.11
SNX1-214ENST00000625244 TWF2Q6IBS0 349 aaKnown RBP15.74■□□□□ 0.11
SNX1-214ENST00000625244 MIS18BP1Q6P0N0 1132 aa15.74■□□□□ 0.11
SNX1-214ENST00000625244 CATIPQ7Z7H3 387 aa15.74■□□□□ 0.11
SNX1-214ENST00000625244 PALB2Q86YC2 1186 aa15.74■□□□□ 0.11
SNX1-214ENST00000625244 SCLT1Q96NL6 688 aa15.74■□□□□ 0.11
SNX1-214ENST00000625244 HERC2P3Q9BVR0 1158 aa15.74■□□□□ 0.11
SNX1-214ENST00000625244 RXFP1Q9HBX9 757 aa15.74■□□□□ 0.11
SNX1-214ENST00000625244 CHST12Q9NRB3 414 aa15.74■□□□□ 0.11
SNX1-214ENST00000625244 ZDHHC7Q9NXF8 308 aa15.74■□□□□ 0.11
SNX1-214ENST00000625244 CDH7Q9ULB5 785 aa15.74■□□□□ 0.11
SNX1-214ENST00000625244 FAN1Q9Y2M0 1017 aa15.74■□□□□ 0.11
SNX1-214ENST00000625244 ZFP37Q9Y6Q3 630 aaPredicted RBP15.74■□□□□ 0.11
SNX1-214ENST00000625244 ASH1LQ9NR48 2969 aaKnown RBP15.74■□□□□ 0.11
SNX1-214ENST00000625244 DOCK6Q96HP0 2047 aa15.73■□□□□ 0.11
SNX1-214ENST00000625244 hCG_1642624A0A1W2PR95 340 aa15.73■□□□□ 0.11
SNX1-214ENST00000625244 ERICH2A1L162 156 aa15.73■□□□□ 0.11
SNX1-214ENST00000625244 NRP1O14786 923 aa15.73■□□□□ 0.11
SNX1-214ENST00000625244 DHX15O43143 795 aaKnown RBP15.73■□□□□ 0.11
SNX1-214ENST00000625244 TGM5O43548 720 aa15.73■□□□□ 0.11
SNX1-214ENST00000625244 GAS2O43903 313 aaKnown RBP15.73■□□□□ 0.11
SNX1-214ENST00000625244 PLEKHA8P1O95397 391 aa15.73■□□□□ 0.11
SNX1-214ENST00000625244 TMOD1P28289 359 aa15.73■□□□□ 0.11
SNX1-214ENST00000625244 IL31Q6EBC2 164 aa15.73■□□□□ 0.11
SNX1-214ENST00000625244 TPRG1Q6ZUI0 275 aa15.73■□□□□ 0.11
SNX1-214ENST00000625244 CMTR1Q8N1G2 835 aaKnown RBP15.73■□□□□ 0.11
SNX1-214ENST00000625244 ZNF710Q8N1W2 664 aa15.73■□□□□ 0.11
SNX1-214ENST00000625244 SRBD1Q8N5C6 995 aaKnown RBP15.73■□□□□ 0.11
SNX1-214ENST00000625244 HDAC7Q8WUI4 952 aa15.73■□□□□ 0.11
SNX1-214ENST00000625244 NLRP7Q8WX94 980 aa15.73■□□□□ 0.11
SNX1-214ENST00000625244 TMEM175Q9BSA9 504 aa15.73■□□□□ 0.11
SNX1-214ENST00000625244 PLEKHA4Q9H4M7 779 aa15.73■□□□□ 0.11
SNX1-214ENST00000625244 LY9Q9HBG7 655 aa15.73■□□□□ 0.11
SNX1-214ENST00000625244 MARCH5Q9NX47 278 aa15.73■□□□□ 0.11
SNX1-214ENST00000625244 CEP131Q9UPN4 1083 aa15.73■□□□□ 0.11
SNX1-214ENST00000625244 FREM2Q5SZK8 3169 aa15.73■□□□□ 0.11
SNX1-214ENST00000625244 F5P12259 2224 aa15.72■□□□□ 0.11
SNX1-214ENST00000625244 SHISA7A6NL88 538 aa15.72■□□□□ 0.11
SNX1-214ENST00000625244 SOBPA7XYQ1 873 aa15.72■□□□□ 0.11
SNX1-214ENST00000625244 TM4SF5O14894 197 aa15.72■□□□□ 0.11
SNX1-214ENST00000625244 NCAM2O15394 837 aa15.72■□□□□ 0.11
SNX1-214ENST00000625244 SMARCA1P28370 1054 aa15.72■□□□□ 0.11
SNX1-214ENST00000625244 NTHL1P78549 312 aa15.72■□□□□ 0.11
SNX1-214ENST00000625244 PFKPQ01813 784 aa15.72■□□□□ 0.11
SNX1-214ENST00000625244 UNQ6494/PRO21346Q6UXR6 183 aa15.72■□□□□ 0.11
SNX1-214ENST00000625244 GRASPQ7Z6J2 395 aaPredicted RBP15.72■□□□□ 0.11
SNX1-214ENST00000625244 MAP4K1Q92918 833 aa15.72■□□□□ 0.11
SNX1-214ENST00000625244 NELL2Q99435 816 aa15.72■□□□□ 0.11
SNX1-214ENST00000625244 KXD1Q9BQD3 176 aa15.72■□□□□ 0.11
SNX1-214ENST00000625244 FAM105AQ9NUU6 356 aa15.72■□□□□ 0.11
SNX1-214ENST00000625244 ZBTB47Q9UFB7 747 aaPredicted RBP15.72■□□□□ 0.11
SNX1-214ENST00000625244 SSX2IPQ9Y2D8 614 aa15.72■□□□□ 0.11
SNX1-214ENST00000625244 ZNF623O75123 536 aa15.71■□□□□ 0.11
SNX1-214ENST00000625244 EFEMP2O95967 443 aa15.71■□□□□ 0.11
SNX1-214ENST00000625244 SKIP12755 728 aa15.71■□□□□ 0.11
SNX1-214ENST00000625244 GLUD2P49448 558 aa15.71■□□□□ 0.11
SNX1-214ENST00000625244 NRLP54845 237 aa15.71■□□□□ 0.11
SNX1-214ENST00000625244 TRDNQ13061 729 aa15.71■□□□□ 0.11
SNX1-214ENST00000625244 DRP2Q13474 957 aa15.71■□□□□ 0.11
SNX1-214ENST00000625244 AGMOQ6ZNB7 445 aa15.71■□□□□ 0.11
SNX1-214ENST00000625244 MTSS1LQ765P7 747 aa15.71■□□□□ 0.11
SNX1-214ENST00000625244 RNF168Q8IYW5 571 aaPredicted RBP15.71■□□□□ 0.11
SNX1-214ENST00000625244 KDF1Q8NAX2 398 aaPredicted RBP15.71■□□□□ 0.11
SNX1-214ENST00000625244 CTCFLQ8NI51 663 aaPredicted RBP15.71■□□□□ 0.11
SNX1-214ENST00000625244 URGCPQ8TCY9 931 aa15.71■□□□□ 0.11
SNX1-214ENST00000625244 FGF13Q92913 245 aa15.71■□□□□ 0.11
SNX1-214ENST00000625244 DIAPH3Q9NSV4 1193 aa15.71■□□□□ 0.11
SNX1-214ENST00000625244 PIN4Q9Y237 131 aaKnown RBP15.71■□□□□ 0.11
SNX1-214ENST00000625244 PRG3Q9Y2Y8 225 aaPredicted RBP15.71■□□□□ 0.11
SNX1-214ENST00000625244 HRO43593 1189 aa15.7■□□□□ 0.1
SNX1-214ENST00000625244 POMCP01189 267 aa15.7■□□□□ 0.1
SNX1-214ENST00000625244 DSG1Q02413 1049 aa15.7■□□□□ 0.1
SNX1-214ENST00000625244 ADCY1Q08828 1119 aa15.7■□□□□ 0.1
SNX1-214ENST00000625244 SIM2Q14190 667 aaPredicted RBP15.7■□□□□ 0.1
SNX1-214ENST00000625244 LILRA6Q6PI73 481 aa15.7■□□□□ 0.1
SNX1-214ENST00000625244 ZNF852Q6ZMS4 543 aa15.7■□□□□ 0.1
SNX1-214ENST00000625244 GLYCTKQ8IVS8 523 aa15.7■□□□□ 0.1
SNX1-214ENST00000625244 ZNF687Q8N1G0 1237 aa15.7■□□□□ 0.1
SNX1-214ENST00000625244 FAM193BQ96PV7 902 aaPredicted RBP15.7■□□□□ 0.1
SNX1-214ENST00000625244 MAP3K14Q99558 947 aa15.7■□□□□ 0.1
SNX1-214ENST00000625244 GCOM2Q9BZD3 368 aaPredicted RBP15.7■□□□□ 0.1
SNX1-214ENST00000625244 IL25Q9H293 177 aa15.7■□□□□ 0.1
SNX1-214ENST00000625244 GABBR1Q9UBS5 961 aa15.7■□□□□ 0.1
SNX1-214ENST00000625244 BPTFQ12830 3046 aa15.7■□□□□ 0.1
SNX1-214ENST00000625244 SDK1Q7Z5N4 2213 aa15.7■□□□□ 0.1
SNX1-214ENST00000625244 F8W810 466 aa15.69■□□□□ 0.1
SNX1-214ENST00000625244 ZMYND10O75800 440 aa15.69■□□□□ 0.1
SNX1-214ENST00000625244 NCLP19338 710 aaKnown RBP15.69■□□□□ 0.1
SNX1-214ENST00000625244 LIMK1P53667 647 aa15.69■□□□□ 0.1
SNX1-214ENST00000625244 SRSF5Q13243 272 aaKnown RBP15.69■□□□□ 0.1
SNX1-214ENST00000625244 ZNF654Q8IZM8 581 aa15.69■□□□□ 0.1
SNX1-214ENST00000625244 IGDCC4Q8TDY8 1250 aa15.69■□□□□ 0.1
SNX1-214ENST00000625244 B3GALT6Q96L58 329 aa15.69■□□□□ 0.1
SNX1-214ENST00000625244 LZTS2Q9BRK4 669 aa15.69■□□□□ 0.1
SNX1-214ENST00000625244 PHF20Q9BVI0 1012 aa15.69■□□□□ 0.1
SNX1-214ENST00000625244 CHRDQ9H2X0 955 aa15.69■□□□□ 0.1
SNX1-214ENST00000625244 HEBP1Q9NRV9 189 aa15.69■□□□□ 0.1
SNX1-214ENST00000625244 PCDHB2Q9Y5E7 798 aa15.69■□□□□ 0.1
SNX1-214ENST00000625244 TAF6LQ9Y6J9 622 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms