RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 SUPT3HO75486 399 aa11.53□□□□□ -0.56
CDH1-214ENST00000621016 FERP16591 822 aa11.53□□□□□ -0.56
CDH1-214ENST00000621016 ZNF24P17028 368 aa11.53□□□□□ -0.56
CDH1-214ENST00000621016 STAT1P42224 750 aa11.53□□□□□ -0.56
CDH1-214ENST00000621016 RRP1BQ14684 758 aaKnown RBP11.53□□□□□ -0.56
CDH1-214ENST00000621016 DRAP1Q14919 205 aaPredicted RBP11.53□□□□□ -0.56
CDH1-214ENST00000621016 FAM133BQ5BKY9 247 aaKnown RBP11.53□□□□□ -0.56
CDH1-214ENST00000621016 C16orf87Q6PH81 154 aa11.53□□□□□ -0.56
CDH1-214ENST00000621016 OLFML1Q6UWY5 402 aa11.53□□□□□ -0.56
CDH1-214ENST00000621016 ZNF713Q8N859 430 aaPredicted RBP11.53□□□□□ -0.56
CDH1-214ENST00000621016 MYCBPAPQ8TBZ2 947 aa11.53□□□□□ -0.56
CDH1-214ENST00000621016 CCDC127Q96BQ5 260 aa11.53□□□□□ -0.56
CDH1-214ENST00000621016 DNAJC12Q9UKB3 198 aa11.53□□□□□ -0.56
CDH1-214ENST00000621016 ATF5Q9Y2D1 282 aaPredicted RBP11.53□□□□□ -0.56
CDH1-214ENST00000621016 SCN7AQ01118 1682 aa11.53□□□□□ -0.56
CDH1-214ENST00000621016 CALCAP01258 141 aa11.52□□□□□ -0.56
CDH1-214ENST00000621016 RPL13P26373 211 aaKnown RBP11.52□□□□□ -0.56
CDH1-214ENST00000621016 USP11P51784 963 aa11.52□□□□□ -0.56
CDH1-214ENST00000621016 GET4Q7L5D6 327 aaPredicted RBP11.52□□□□□ -0.56
CDH1-214ENST00000621016 SLC35C1Q96A29 364 aa11.52□□□□□ -0.56
CDH1-214ENST00000621016 NEUROG2Q9H2A3 272 aa11.52□□□□□ -0.56
CDH1-214ENST00000621016 A8MUI8 341 aa11.52□□□□□ -0.57
CDH1-214ENST00000621016 GOLGA8KD6RF30 607 aa11.52□□□□□ -0.57
CDH1-214ENST00000621016 DDX3XO00571 662 aaKnown RBP eCLIP11.52□□□□□ -0.57
CDH1-214ENST00000621016 PJA2O43164 708 aa11.52□□□□□ -0.57
CDH1-214ENST00000621016 CREB3O43889 395 aa11.52□□□□□ -0.57
CDH1-214ENST00000621016 NR1D1P20393 614 aa11.52□□□□□ -0.57
CDH1-214ENST00000621016 RPA1P27694 616 aa11.52□□□□□ -0.57
CDH1-214ENST00000621016 TAF11Q15544 211 aa11.52□□□□□ -0.57
CDH1-214ENST00000621016 QPCTQ16769 361 aa11.52□□□□□ -0.57
CDH1-214ENST00000621016 CBWD6Q4V339 395 aa11.52□□□□□ -0.57
CDH1-214ENST00000621016 CBWD3Q5JTY5 395 aa11.52□□□□□ -0.57
CDH1-214ENST00000621016 CBWD5Q5RIA9 395 aa11.52□□□□□ -0.57
CDH1-214ENST00000621016 RINT1Q6NUQ1 792 aa11.52□□□□□ -0.57
CDH1-214ENST00000621016 ZNF662Q6ZS27 426 aa11.52□□□□□ -0.57
CDH1-214ENST00000621016 HS2ST1Q7LGA3 356 aa11.52□□□□□ -0.57
CDH1-214ENST00000621016 TAX1BP1Q86VP1 789 aa11.52□□□□□ -0.57
CDH1-214ENST00000621016 CCDC25Q86WR0 208 aa11.52□□□□□ -0.57
CDH1-214ENST00000621016 ETNPPLQ8TBG4 499 aa11.52□□□□□ -0.57
CDH1-214ENST00000621016 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.52□□□□□ -0.57
CDH1-214ENST00000621016 PRR12Q9ULL5 1215 aa11.52□□□□□ -0.57
CDH1-214ENST00000621016 PTPN22Q9Y2R2 807 aa11.52□□□□□ -0.57
CDH1-214ENST00000621016 AFF2P51816 1311 aa11.52□□□□□ -0.57
CDH1-214ENST00000621016 LRRD1A4D1F6 860 aa11.52□□□□□ -0.57
CDH1-214ENST00000621016 ECE2O60344 883 aa11.52□□□□□ -0.57
CDH1-214ENST00000621016 LCA5LO95447 670 aa11.52□□□□□ -0.57
CDH1-214ENST00000621016 PCK1P35558 622 aa11.52□□□□□ -0.57
CDH1-214ENST00000621016 GCLMP48507 274 aa11.52□□□□□ -0.57
CDH1-214ENST00000621016 ELF3P78545 371 aaPredicted RBP11.52□□□□□ -0.57
CDH1-214ENST00000621016 DGKZQ13574 1117 aa11.52□□□□□ -0.57
CDH1-214ENST00000621016 SYT2Q8N9I0 419 aaPredicted RBP11.52□□□□□ -0.57
CDH1-214ENST00000621016 IQCDQ96DY2 449 aa11.52□□□□□ -0.57
CDH1-214ENST00000621016 CCDC17Q96LX7 622 aa11.52□□□□□ -0.57
CDH1-214ENST00000621016 INPP4AQ96PE3 977 aaPredicted RBP11.52□□□□□ -0.57
CDH1-214ENST00000621016 CORO1CQ9ULV4 474 aaPredicted RBP11.52□□□□□ -0.57
CDH1-214ENST00000621016 CCDC88AQ3V6T2 1871 aa11.51□□□□□ -0.57
CDH1-214ENST00000621016 KIAA1551Q9HCM1 1747 aa11.51□□□□□ -0.57
CDH1-214ENST00000621016 ABCB11O95342 1321 aa11.51□□□□□ -0.57
CDH1-214ENST00000621016 DCDC2CA8MYV0 355 aa11.51□□□□□ -0.57
CDH1-214ENST00000621016 ARP10275 920 aa11.51□□□□□ -0.57
CDH1-214ENST00000621016 PRLRP16471 622 aa11.51□□□□□ -0.57
CDH1-214ENST00000621016 SLCO1A2P46721 670 aa11.51□□□□□ -0.57
CDH1-214ENST00000621016 DHX9Q08211 1270 aaKnown RBP11.51□□□□□ -0.57
CDH1-214ENST00000621016 ZSWIM2Q8NEG5 633 aa11.51□□□□□ -0.57
CDH1-214ENST00000621016 SLC35G2Q8TBE7 412 aa11.51□□□□□ -0.57
CDH1-214ENST00000621016 CRAMP1Q96RY5 1269 aa11.51□□□□□ -0.57
CDH1-214ENST00000621016 LRRC4CQ9HCJ2 640 aa11.51□□□□□ -0.57
CDH1-214ENST00000621016 FBXL5Q9UKA1 691 aa11.51□□□□□ -0.57
CDH1-214ENST00000621016 PPP1R9AQ9ULJ8 1098 aa11.51□□□□□ -0.57
CDH1-214ENST00000621016 TNRC6CQ9HCJ0 1690 aaKnown RBP11.51□□□□□ -0.57
CDH1-214ENST00000621016 ASTN1O14525 1302 aa11.51□□□□□ -0.57
CDH1-214ENST00000621016 TNFAIP3P21580 790 aa11.51□□□□□ -0.57
CDH1-214ENST00000621016 PLTPP55058 493 aa11.51□□□□□ -0.57
CDH1-214ENST00000621016 SPIRE1Q08AE8 756 aa11.51□□□□□ -0.57
CDH1-214ENST00000621016 KIAA1755Q5JYT7 1200 aa11.51□□□□□ -0.57
CDH1-214ENST00000621016 CHADLQ6NUI6 762 aa11.51□□□□□ -0.57
CDH1-214ENST00000621016 TPCN2Q8NHX9 752 aa11.51□□□□□ -0.57
CDH1-214ENST00000621016 CERKQ8TCT0 537 aa11.51□□□□□ -0.57
CDH1-214ENST00000621016 CTNNBL1Q8WYA6 563 aaPredicted RBP11.51□□□□□ -0.57
CDH1-214ENST00000621016 LENG9Q96B70 501 aa11.51□□□□□ -0.57
CDH1-214ENST00000621016 HVCN1Q96D96 273 aa11.51□□□□□ -0.57
CDH1-214ENST00000621016 GLIS2Q9BZE0 524 aaPredicted RBP11.51□□□□□ -0.57
CDH1-214ENST00000621016 UBE2TQ9NPD8 197 aaPredicted RBP11.51□□□□□ -0.57
CDH1-214ENST00000621016 AIPL1Q9NZN9 384 aa11.51□□□□□ -0.57
CDH1-214ENST00000621016 CTTNBP2NLQ9P2B4 639 aa11.51□□□□□ -0.57
CDH1-214ENST00000621016 WRAP73Q9P2S5 460 aaPredicted RBP11.51□□□□□ -0.57
CDH1-214ENST00000621016 TSKSQ9UJT2 592 aa11.51□□□□□ -0.57
CDH1-214ENST00000621016 NOVA2Q9UNW9 492 aaKnown RBP11.51□□□□□ -0.57
CDH1-214ENST00000621016 FRMD4BQ9Y2L6 1034 aa11.51□□□□□ -0.57
CDH1-214ENST00000621016 PGRMC1O00264 195 aaKnown RBP11.5□□□□□ -0.57
CDH1-214ENST00000621016 DLG4P78352 724 aa11.5□□□□□ -0.57
CDH1-214ENST00000621016 RASA3Q14644 834 aa11.5□□□□□ -0.57
CDH1-214ENST00000621016 KRT71Q3SY84 523 aa11.5□□□□□ -0.57
CDH1-214ENST00000621016 C2CD6Q53TS8 623 aa11.5□□□□□ -0.57
CDH1-214ENST00000621016 NSMFQ6X4W1 530 aa11.5□□□□□ -0.57
CDH1-214ENST00000621016 MDM1Q8TC05 714 aa11.5□□□□□ -0.57
CDH1-214ENST00000621016 SLC20A1Q8WUM9 679 aa11.5□□□□□ -0.57
CDH1-214ENST00000621016 BTBD6Q96KE9 485 aa11.5□□□□□ -0.57
CDH1-214ENST00000621016 ZNF577Q9BSK1 485 aa11.5□□□□□ -0.57
CDH1-214ENST00000621016 WDR18Q9BV38 432 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms