RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 KCTD6Q8NC69 237 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 USP13Q92995 863 aaPredicted RBP5.35□□□□□ -1.55
VPS13D-214ENST00000620676 PLEKHG4BQ96PX9 1271 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 EFCAB5A4FU69 1503 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 WASLO00401 505 aaPredicted RBP5.35□□□□□ -1.55
VPS13D-214ENST00000620676 KRT19P08727 400 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 DDB1Q16531 1140 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 CCNYL1Q8N7R7 359 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 GRK7Q8WTQ7 553 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 RBM41Q96IZ5 413 aaKnown RBP5.35□□□□□ -1.55
VPS13D-214ENST00000620676 SH3GLB1Q9Y371 365 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 DTNAQ9Y4J8 743 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 PPME1Q9Y570 386 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 CLDN3O15551 220 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 AKAP10O43572 662 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 CHRM1P11229 460 aaPredicted RBP5.35□□□□□ -1.55
VPS13D-214ENST00000620676 ECE1P42892 770 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 SDCCAG3Q96C92 435 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 ETNK2Q9NVF9 386 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 RAB21Q9UL25 225 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 DNM3Q9UQ16 869 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 A6NJR5 290 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 SPDYE16A6NNV3 312 aaPredicted RBP5.35□□□□□ -1.55
VPS13D-214ENST00000620676 CCDC22O60826 627 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 MFN2O95140 757 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 BCAMP50895 628 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 PABPC4Q13310 644 aaKnown RBP eCLIP5.35□□□□□ -1.55
VPS13D-214ENST00000620676 EPC2Q52LR7 807 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 LVRNQ6Q4G3 990 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 ZNF570Q96NI8 536 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 HPS4Q9NQG7 708 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 C20orf96Q9NUD7 363 aaPredicted RBP5.35□□□□□ -1.55
VPS13D-214ENST00000620676 APPBP2Q92624 585 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 CPVLQ9H3G5 476 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 TFCP2L1Q9NZI6 479 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 HSPBP1Q9NZL4 362 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 DCDC2CA8MYV0 355 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 STAM2O75886 525 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 MSX2P35548 267 aaPredicted RBP5.35□□□□□ -1.55
VPS13D-214ENST00000620676 ABL2P42684 1182 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 RFWD3Q6PCD5 774 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 STXBP4Q6ZWJ1 553 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 SATL1Q86VE3 508 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 ATP11CQ8NB49 1132 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 HDAC2Q92769 488 aaKnown RBP5.35□□□□□ -1.55
VPS13D-214ENST00000620676 SOS2Q07890 1332 aaPredicted RBP5.35□□□□□ -1.55
VPS13D-214ENST00000620676 NCOA3Q9Y6Q9 1424 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 GNA14O95837 355 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 CLPTM1O96005 669 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 CD19P15391 556 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 AARSP49588 968 aaKnown RBP eCLIP5.35□□□□□ -1.55
VPS13D-214ENST00000620676 CASP5P51878 434 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 MYL7Q01449 175 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 AASDHPPTQ9NRN7 309 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 GRID2IPA4D2P6 1211 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 F8VZ95 297 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 HLA-DPA1P20036 260 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 C21orf59P57076 290 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 MADCAM1Q13477 382 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 BYSLQ13895 437 aaKnown RBP5.35□□□□□ -1.55
VPS13D-214ENST00000620676 ELMO3Q96BJ8 720 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 MTBPQ96DY7 904 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 CCDC61Q9Y6R9 512 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 A0A1W2PP64 1363 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 PITPNM2Q9BZ72 1349 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 SAC3D1A6NKF1 404 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 PIAS1O75925 651 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 TTC4O95801 387 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 ITGA7Q13683 1181 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 PPP2R5BQ15173 497 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 INAQ16352 499 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 MAN2A1Q16706 1144 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 POU5F2Q8N7G0 328 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 OSBP2Q969R2 916 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 NUP85Q9BW27 656 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 E2F6O75461 281 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 PLEKHA8P1O95397 391 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 HDAC4P56524 1084 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 NEDD8Q15843 81 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 FAM102BQ5T8I3 360 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 ARL6IP4Q66PJ3 421 aaKnown RBP5.35□□□□□ -1.55
VPS13D-214ENST00000620676 KRT27Q7Z3Y8 459 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 SCUBE1Q8IWY4 988 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 CCDC33Q8N5R6 958 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 MANSC1Q9H8J5 431 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 C10orf88Q9H8K7 445 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 C14orf93Q9H972 538 aaKnown RBP5.35□□□□□ -1.55
VPS13D-214ENST00000620676 PARVGQ9HBI0 331 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 PRPF6O94906 941 aaKnown RBP5.35□□□□□ -1.55
VPS13D-214ENST00000620676 NR2F2P24468 414 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 ADCY7P51828 1080 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 GABBR1Q9UBS5 961 aa5.35□□□□□ -1.55
VPS13D-214ENST00000620676 A0A1B0GTH6 734 aa5.34□□□□□ -1.55
VPS13D-214ENST00000620676 VIL1P09327 827 aaKnown RBP5.34□□□□□ -1.55
VPS13D-214ENST00000620676 STAT3P40763 770 aa5.34□□□□□ -1.55
VPS13D-214ENST00000620676 PLD3Q8IV08 490 aa5.34□□□□□ -1.55
VPS13D-214ENST00000620676 CCNJLQ8IV13 435 aa5.34□□□□□ -1.55
VPS13D-214ENST00000620676 UBASH3BQ8TF42 649 aa5.34□□□□□ -1.55
VPS13D-214ENST00000620676 ACSF2Q96CM8 615 aaPredicted RBP5.34□□□□□ -1.55
VPS13D-214ENST00000620676 DSCC1Q9BVC3 393 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms