RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 STMN4Q9H169 189 aaPredicted RBP7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 DPH5Q9H2P9 285 aa7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 PKD2L1Q9P0L9 805 aa7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 ATXN2Q99700 1313 aaKnown RBP7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 SIPA1L1O43166 1804 aa7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 ZSCAN5CA6NGD5 496 aaPredicted RBP7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 NFIBO00712 420 aa7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 ZNF263O14978 683 aa7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 RAD51CO43502 376 aa7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 KIF1CO43896 1103 aaKnown RBP7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 VIMP08670 466 aaKnown RBP7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 FAM153BP0C7A2 387 aa7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 PPP2R2AP63151 447 aa7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 E2F5Q15329 346 aa7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 FAM153CQ494X1 144 aa7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 MIIPQ5JXC2 388 aa7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 SNRNP48Q6IEG0 339 aaKnown RBP7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 YTHDF3Q7Z739 585 aaKnown RBP7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 RBM46Q8TBY0 533 aaKnown RBP7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 CASKIN2Q8WXE0 1202 aa7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 CLMNQ96JQ2 1002 aa7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 NAP1L3Q99457 506 aaPredicted RBP7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 AP1M1Q9BXS5 423 aa7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 CNOT10Q9H9A5 744 aaKnown RBP7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 CD248Q9HCU0 757 aa7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 PLCB1Q9NQ66 1216 aa7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 PANK4Q9NVE7 773 aa7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 HOXC10Q9NYD6 342 aa7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 VTI1BQ9UEU0 232 aa7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 FAM153AQ9UHL3 310 aa7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 CCDC188H7C350 402 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 MYCLP12524 364 aaPredicted RBP7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 KRT13P13646 458 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 HNRNPH3P31942 346 aaKnown RBP7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 SLC18A3Q16572 532 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 DCAF17Q5H9S7 520 aaPredicted RBP7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 C10orf76Q5T2E6 689 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 CENPPQ6IPU0 288 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 CCDC197Q8NCU1 140 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 L3MBTL3Q96JM7 780 aaPredicted RBP7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 SLC38A10Q9HBR0 1119 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 SLC40A1Q9NP59 571 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 GDF3Q9NR23 364 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 ZNF233A6NK53 670 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 VWA5AO00534 786 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 PJA2O43164 708 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 PRKAR2AP13861 404 aaKnown RBP7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 KLRC1P26715 233 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 RAB15P59190 212 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 DHX9Q08211 1270 aaKnown RBP7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 NR6A1Q15406 480 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 NAB2Q15742 525 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 WDR78Q5VTH9 848 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 CYP2W1Q8TAV3 490 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 SLC10A4Q96EP9 437 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 PLCD4Q9BRC7 762 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 PAGR1Q9BTK6 254 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 SEMA6BQ9H3T3 888 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 FAM114A2Q9NRY5 505 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 RNF146Q9NTX7 359 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 CEP83Q9Y592 693 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 BZW2Q9Y6E2 419 aaKnown RBP7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 SNCAIPQ9Y6H5 919 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 ARFGEF1Q9Y6D6 1849 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 CHMP2AO43633 222 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 KIF4AO95239 1232 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 H2AFZP0C0S5 128 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 EIF2AK2P19525 551 aaKnown RBP7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 ELF1P32519 619 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 SREBF1P36956 1147 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 MAGOHP61326 146 aaKnown RBP7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 DENND2CQ68D51 928 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 RNF207Q6ZRF8 634 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 H2AFVQ71UI9 128 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 ZNF572Q7Z3I7 529 aaPredicted RBP7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 ERO1BQ86YB8 467 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 SLFN12Q8IYM2 578 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 USP38Q8NB14 1042 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 P3H4Q92791 437 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 MAGOHBQ96A72 148 aaKnown RBP7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 MTMR9Q96QG7 549 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 P2RX7Q99572 595 aaKnown RBP7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 ISCUQ9H1K1 167 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 RRAGCQ9HB90 399 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 MTRF1LQ9UGC7 380 aaKnown RBP7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 SIK3Q9Y2K2 1263 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 AFG3L2Q9Y4W6 797 aa7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 ZNF646O15015 1829 aaPredicted RBP7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 ZC3H4Q9UPT8 1303 aaKnown RBP7.55□□□□□ -1.2
SRGAP3-213ENST00000618999 OPLAHO14841 1288 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 TPD52L2O43399 206 aaKnown RBP7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 POTEIP0CG38 1075 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 POTEJP0CG39 1038 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 FDX1P10109 184 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 SF3A3Q12874 501 aaKnown RBP eCLIP7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 ADAM9Q13443 819 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 CD302Q8IX05 232 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 IQCKQ8N0W5 287 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 MREGQ8N565 214 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 C3orf20Q8ND61 904 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms