RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 PAK2Q13177 524 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 CAPSQ13938 189 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 DSC3Q14574 896 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 PPP2R2DQ66LE6 453 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 HAUS3Q68CZ6 603 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 PDE12Q6L8Q7 609 aaKnown RBP5.8□□□□□ -1.48
SHMT1-211ENST00000618902 SLC24A5Q71RS6 500 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 TAS1R3Q7RTX0 852 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 TMCO2Q7Z6W1 182 aaPredicted RBP5.8□□□□□ -1.48
SHMT1-211ENST00000618902 NPAS4Q8IUM7 802 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 GRAMD1CQ8IYS0 662 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 PDILTQ8N807 584 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 KCNG4Q8TDN1 519 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 ATXN2LQ8WWM7 1075 aaKnown RBP5.8□□□□□ -1.48
SHMT1-211ENST00000618902 STAMQ92783 540 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 CLP1Q92989 425 aaKnown RBP5.8□□□□□ -1.48
SHMT1-211ENST00000618902 P2RX5Q93086 422 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 PPP2R3CQ969Q6 453 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 DNAJC19Q96DA6 116 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 CCDC51Q96ER9 411 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 SPATA32Q96LK8 384 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 CDX2Q99626 313 aaPredicted RBP5.8□□□□□ -1.48
SHMT1-211ENST00000618902 KIFC3Q9BVG8 833 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 LMAN2LQ9H0V9 348 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 POLR3FQ9H1D9 316 aaPredicted RBP5.8□□□□□ -1.48
SHMT1-211ENST00000618902 ATP6V0A4Q9HBG4 840 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 ERVK-5Q9HDB9 667 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 UBN1Q9NPG3 1134 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 AAASQ9NRG9 546 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 PADI3Q9ULW8 664 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 DNM3Q9UQ16 869 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 AKT3Q9Y243 479 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 HPSEQ9Y251 543 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 USP20Q9Y2K6 914 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 COL4A3BPQ9Y5P4 624 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.8□□□□□ -1.48
SHMT1-211ENST00000618902 MICAL3Q7RTP6 2002 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 ZMYM2Q9UBW7 1377 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 PRRC2BQ5JSZ5 2229 aaKnown RBP5.79□□□□□ -1.48
SHMT1-211ENST00000618902 A0A087WZ62 844 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 A0A1B0GVL5 298 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 GRXCR1A8MXD5 290 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 ENPP3O14638 875 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 POLR2DO15514 142 aaKnown RBP5.79□□□□□ -1.48
SHMT1-211ENST00000618902 HIP1RO75146 1068 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 RPS6KA5O75582 802 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 ARHGEF15O94989 841 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 C1RP00736 705 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 SSBP05455 408 aaKnown RBP eCLIP5.79□□□□□ -1.48
SHMT1-211ENST00000618902 SRGAP2CP0DJJ0 459 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 DARSP14868 501 aaKnown RBP5.79□□□□□ -1.48
SHMT1-211ENST00000618902 PFKFB1P16118 471 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 ZSCAN20P17040 1043 aaPredicted RBP5.79□□□□□ -1.48
SHMT1-211ENST00000618902 SFPQP23246 707 aaKnown RBP eCLIP5.79□□□□□ -1.48
SHMT1-211ENST00000618902 CMA1P23946 247 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 GUCY2CP25092 1073 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 AXLP30530 894 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 HOXA11P31270 313 aaPredicted RBP5.79□□□□□ -1.48
SHMT1-211ENST00000618902 GTF2F1P35269 517 aaKnown RBP eCLIP5.79□□□□□ -1.48
SHMT1-211ENST00000618902 SARSP49591 514 aaKnown RBP5.79□□□□□ -1.48
SHMT1-211ENST00000618902 RAB27AP51159 221 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 NDUFA8P51970 172 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 PTENP60484 403 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 FAM189BP81408 668 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 DEFB103AP81534 67 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 BMS1Q14692 1282 aaKnown RBP5.79□□□□□ -1.48
SHMT1-211ENST00000618902 NOLC1Q14978 699 aaKnown RBP eCLIP5.79□□□□□ -1.48
SHMT1-211ENST00000618902 AMHR2Q16671 573 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 PUS10Q3MIT2 529 aaKnown RBP5.79□□□□□ -1.48
SHMT1-211ENST00000618902 FAM102BQ5T8I3 360 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 ADALQ6DHV7 355 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.79□□□□□ -1.48
SHMT1-211ENST00000618902 RBM43Q6ZSC3 357 aaKnown RBP5.79□□□□□ -1.48
SHMT1-211ENST00000618902 SRGAP1Q7Z6B7 1085 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 GPBP1Q86WP2 473 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 RHPN2Q8IUC4 686 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 CMTR2Q8IYT2 770 aaKnown RBP5.79□□□□□ -1.48
SHMT1-211ENST00000618902 CRIPAKQ8N1N5 446 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 FSIP1Q8NA03 581 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 CNNM3Q8NE01 707 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 MCPH1Q8NEM0 835 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 FAM200AQ8TCP9 573 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 CALML4Q96GE6 196 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 CDK5RAP3Q96JB5 506 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 GUCD1Q96NT3 240 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 FIZ1Q96SL8 496 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 YME1L1Q96TA2 773 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 REEP2Q9BRK0 252 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 FDXACB1Q9BRP7 624 aaPredicted RBP5.79□□□□□ -1.48
SHMT1-211ENST00000618902 C11orf84Q9BUA3 381 aaPredicted RBP5.79□□□□□ -1.48
SHMT1-211ENST00000618902 TIPINQ9BVW5 301 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 FGFBP2Q9BYJ0 223 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 GCOM2Q9BZD3 368 aaPredicted RBP5.79□□□□□ -1.48
SHMT1-211ENST00000618902 TTYH1Q9H313 450 aaPredicted RBP5.79□□□□□ -1.48
SHMT1-211ENST00000618902 C17orf75Q9HAS0 396 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 RGS18Q9NS28 235 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 KCND2Q9NZV8 630 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 ST3GAL5Q9UNP4 418 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 GINS2Q9Y248 185 aa5.79□□□□□ -1.48
SHMT1-211ENST00000618902 A0A0U1RQF3 1178 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms