RNA–Protein interactions for RNA: ENST00000618385.1

SYNJ2BP-COX16-204, Transcript of SYNJ2BP-COX16 readthrough, humanhuman

TSL 3

Gene SYNJ2BP-COX16, Length 656 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNJ2BP-COX16-204ENST00000618385 TMEM87AQ8NBN3 555 aa15.18■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 SMRP1Q8NCR6 262 aa15.18■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 KHSRPQ92945 711 aaKnown RBP eCLIP15.18■□□□□ 0.029e-7■■□□□ 13.5
SYNJ2BP-COX16-204ENST00000618385 FAM193BQ96PV7 902 aaPredicted RBP15.18■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 NACC1Q96RE7 527 aa15.18■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 KIF2CQ99661 725 aa15.18■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 GBP3Q9H0R5 595 aa15.18■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 RSAD1Q9HA92 442 aa15.18■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 UBN1Q9NPG3 1134 aa15.18■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 XPNPEP1Q9NQW7 623 aa15.18■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 TBC1D13Q9NVG8 400 aa15.18■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 KANSL3Q9P2N6 904 aa15.18■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 C19orf67A6NJJ6 358 aa15.17■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 NT5C1B-RDH14C9J2C7 533 aa15.17■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 USO1O60763 962 aaKnown RBP15.17■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 OFD1O75665 1012 aa15.17■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 GLP2RO95838 553 aa15.17■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 HOXA11P31270 313 aaPredicted RBP15.17■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 HAUS3Q68CZ6 603 aa15.17■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 MRPL10Q7Z7H8 261 aaKnown RBP15.17■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 CATSPER3Q86XQ3 398 aa15.17■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 HACE1Q8IYU2 909 aa15.17■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 MCPH1Q8NEM0 835 aa15.17■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 CCDC51Q96ER9 411 aa15.17■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 POLR3CQ9BUI4 534 aaPredicted RBP15.17■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 TRIM6Q9C030 488 aaPredicted RBP15.17■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 DBR1Q9UK59 544 aaKnown RBP15.17■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 MEIS3P2A8K0S8 358 aa15.16■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 HIDE1A8MVS5 230 aa15.16■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 TSPAN1O60635 241 aa15.16■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 GPR37L1O60883 481 aa15.16■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 SPATA31C1P0DKV0 1188 aa15.16■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 ITGA4P13612 1032 aa15.16■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 NCLP19338 710 aaKnown RBP15.16■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 ARL2P36404 184 aa15.16■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 CAPSQ13938 189 aa15.16■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 GIT2Q14161 759 aa15.16■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 AGMOQ6ZNB7 445 aa15.16■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 IFNLR1Q8IU57 520 aaPredicted RBP15.16■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 MRPL43Q8N983 215 aaKnown RBP15.16■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 LRFN3Q9BTN0 628 aa15.16■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 NFKBIZQ9BYH8 718 aa15.16■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 RAB34Q9BZG1 259 aa15.16■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 POLR3FQ9H1D9 316 aaPredicted RBP15.16■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 NRDE2Q9H7Z3 1164 aa15.16■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 STK39Q9UEW8 545 aa15.16■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 LRRIQ4A6NIV6 560 aa15.15■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 DCXO43602 365 aa15.15■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 MED24O75448 989 aa15.15■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 CXCL14O95715 111 aa15.15■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 GALTP07902 379 aa15.15■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 GLRA2P23416 452 aa15.15■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 RPA1P27694 616 aa15.15■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 MBTD1Q05BQ5 628 aa15.15■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 UBXN11Q5T124 520 aa15.15■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 LLGL2Q6P1M3 1020 aa15.15■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 TMEM184AQ6ZMB5 413 aa15.15■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 MAEAQ7L5Y9 396 aa15.15■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 DDX53Q86TM3 631 aaKnown RBP15.15■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 VPS52Q8N1B4 723 aa15.15■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 ASAP3Q8TDY4 903 aa15.15■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 CASP10Q92851 521 aa15.15■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 IGSF21Q96ID5 467 aa15.15■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 USP15Q9Y4E8 981 aaPredicted RBP15.15■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 IPPQ9Y573 584 aa15.15■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 STK24Q9Y6E0 443 aa15.15■□□□□ 0.02
SYNJ2BP-COX16-204ENST00000618385 A0A087WWV3 80 aa15.14■□□□□ 0.01
SYNJ2BP-COX16-204ENST00000618385 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.14■□□□□ 0.01
SYNJ2BP-COX16-204ENST00000618385 ARHGEF35A5YM69 484 aa15.14■□□□□ 0.01
SYNJ2BP-COX16-204ENST00000618385 C2orf71A6NGG8 1288 aa15.14■□□□□ 0.01
SYNJ2BP-COX16-204ENST00000618385 ALDH2P05091 517 aa15.14■□□□□ 0.01
SYNJ2BP-COX16-204ENST00000618385 HOXB8P17481 243 aaPredicted RBP15.14■□□□□ 0.01
SYNJ2BP-COX16-204ENST00000618385 MUTP22033 750 aa15.14■□□□□ 0.01
SYNJ2BP-COX16-204ENST00000618385 U2AF2P26368 475 aaKnown RBP eCLIP15.14■□□□□ 0.014e-8■■■□□ 17.2
SYNJ2BP-COX16-204ENST00000618385 RBM10P98175 930 aaKnown RBP15.14■□□□□ 0.01
SYNJ2BP-COX16-204ENST00000618385 ANKRD54Q6NXT1 300 aa15.14■□□□□ 0.01
SYNJ2BP-COX16-204ENST00000618385 POTEGQ6S5H5 508 aa15.14■□□□□ 0.01
SYNJ2BP-COX16-204ENST00000618385 ZBTB8OSQ8IWT0 167 aa15.14■□□□□ 0.01
SYNJ2BP-COX16-204ENST00000618385 VN1R2Q8NFZ6 395 aa15.14■□□□□ 0.01
SYNJ2BP-COX16-204ENST00000618385 CPB2Q96IY4 423 aa15.14■□□□□ 0.01
SYNJ2BP-COX16-204ENST00000618385 TMEM175Q9BSA9 504 aa15.14■□□□□ 0.01
SYNJ2BP-COX16-204ENST00000618385 CSRNP2Q9H175 543 aa15.14■□□□□ 0.01
SYNJ2BP-COX16-204ENST00000618385 DNAJB4Q9UDY4 337 aa15.14■□□□□ 0.01
SYNJ2BP-COX16-204ENST00000618385 LRWD1Q9UFC0 647 aa15.14■□□□□ 0.01
SYNJ2BP-COX16-204ENST00000618385 FAN1Q9Y2M0 1017 aa15.14■□□□□ 0.01
SYNJ2BP-COX16-204ENST00000618385 HCN4Q9Y3Q4 1203 aa15.14■□□□□ 0.01
SYNJ2BP-COX16-204ENST00000618385 FAM86C2PA6NEL3 165 aa15.13■□□□□ 0.01
SYNJ2BP-COX16-204ENST00000618385 LAD1O00515 517 aa15.13■□□□□ 0.01
SYNJ2BP-COX16-204ENST00000618385 NR1I2O75469 434 aa15.13■□□□□ 0.01
SYNJ2BP-COX16-204ENST00000618385 POMCP01189 267 aa15.13■□□□□ 0.01
SYNJ2BP-COX16-204ENST00000618385 ARF4P18085 180 aaPredicted RBP15.13■□□□□ 0.01
SYNJ2BP-COX16-204ENST00000618385 CCT6AP40227 531 aaKnown RBP15.13■□□□□ 0.01
SYNJ2BP-COX16-204ENST00000618385 SLC11A1P49279 550 aa15.13■□□□□ 0.01
SYNJ2BP-COX16-204ENST00000618385 FXR2P51116 673 aaKnown RBP eCLIP15.13■□□□□ 0.01
SYNJ2BP-COX16-204ENST00000618385 KCNC3Q14003 757 aa15.13■□□□□ 0.01
SYNJ2BP-COX16-204ENST00000618385 PDIA5Q14554 519 aa15.13■□□□□ 0.01
SYNJ2BP-COX16-204ENST00000618385 TMEM132AQ24JP5 1023 aa15.13■□□□□ 0.01
SYNJ2BP-COX16-204ENST00000618385 TPRNQ4KMQ1 711 aa15.13■□□□□ 0.01
SYNJ2BP-COX16-204ENST00000618385 SLC27A1Q6PCB7 646 aa15.13■□□□□ 0.01
SYNJ2BP-COX16-204ENST00000618385 PADI6Q6TGC4 694 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms