RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 NBPF26B4DH59 902 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 EIF3FO00303 357 aaPredicted RBP7.87□□□□□ -1.15
PDE6A-205ENST00000617647 DEXIO95424 95 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 KRT4P19013 534 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 TKTP29401 623 aaKnown RBP7.87□□□□□ -1.15
PDE6A-205ENST00000617647 CD97P48960 835 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 STK4Q13043 487 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 CNGA3Q16281 694 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 CCSAPQ6IQ19 270 aaPredicted RBP7.87□□□□□ -1.15
PDE6A-205ENST00000617647 NUDCD3Q8IVD9 361 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 MAML1Q92585 1016 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 C10orf88Q9H8K7 445 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 ATAD3AQ9NVI7 634 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 SETD1AO15047 1707 aaKnown RBP7.87□□□□□ -1.15
PDE6A-205ENST00000617647 B2RBV5 119 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 SRGNP10124 158 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 GNAZP19086 355 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 KLRC1P26715 233 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 PBX1P40424 430 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 INHBCP55103 352 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 OCRLQ01968 901 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 KDSRQ06136 332 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 RALGDSQ12967 914 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 ITGA9Q13797 1035 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 NLRP9Q7RTR0 991 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 SLC25A41Q8N5S1 370 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 CAPSLQ8WWF8 208 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 ESR2Q92731 530 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 DHTKD1Q96HY7 919 aaPredicted RBP7.87□□□□□ -1.15
PDE6A-205ENST00000617647 NSL1Q96IY1 281 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 LRGUKQ96M69 825 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 ZNF317Q96PQ6 595 aaPredicted RBP7.87□□□□□ -1.15
PDE6A-205ENST00000617647 CCDC28BQ9BUN5 200 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 VPS37BQ9H9H4 285 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 RRN3Q9NYV6 651 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 HACD3Q9P035 362 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 PPARGC1AQ9UBK2 798 aaKnown RBP7.87□□□□□ -1.15
PDE6A-205ENST00000617647 COQ6Q9Y2Z9 468 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 N6AMT1Q9Y5N5 214 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 H2AFZP0C0S5 128 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 MMP13P45452 471 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 RPL5P46777 297 aaKnown RBP7.87□□□□□ -1.15
PDE6A-205ENST00000617647 CCNG1P51959 295 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 PTGDRQ13258 359 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 TMEM63BQ5T3F8 832 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 WDR59Q6PJI9 974 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 DTHD1Q6ZMT9 781 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 H2AFVQ71UI9 128 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 SLC7A5P1Q8MH63 180 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 UBL4BQ8N7F7 174 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 SH3TC2Q8TF17 1288 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 P2RX5Q93086 422 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 PGM2Q96G03 612 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 ANKRD36BP1Q96IX9 119 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 VPS50Q96JG6 964 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 COX4I2Q96KJ9 171 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 PUS3Q9BZE2 481 aaKnown RBP7.87□□□□□ -1.15
PDE6A-205ENST00000617647 DNAI2Q9GZS0 605 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 ZC4H2Q9NQZ6 224 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 BMP2KQ9NSY1 1161 aaPredicted RBP7.87□□□□□ -1.15
PDE6A-205ENST00000617647 CEP126Q9P2H0 1117 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 PNPLA6Q8IY17 1366 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 PCP4L1A6NKN8 68 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 H3BRJ5 948 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 CNOT3O75175 753 aaKnown RBP7.87□□□□□ -1.15
PDE6A-205ENST00000617647 OR6B1O95007 311 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 OXSR1O95747 527 aaPredicted RBP7.87□□□□□ -1.15
PDE6A-205ENST00000617647 SERPING1P05155 500 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 ENO1P06733 434 aaKnown RBP7.87□□□□□ -1.15
PDE6A-205ENST00000617647 COPB2P35606 906 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 C21orf59P57076 290 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 EXOSC10Q01780 885 aaKnown RBP7.87□□□□□ -1.15
PDE6A-205ENST00000617647 PLCB3Q01970 1234 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 ZNF211Q13398 564 aaPredicted RBP7.87□□□□□ -1.15
PDE6A-205ENST00000617647 GJC2Q5T442 439 aaPredicted RBP7.87□□□□□ -1.15
PDE6A-205ENST00000617647 PIK3AP1Q6ZUJ8 805 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 LPCAT2Q7L5N7 544 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 ZNF579Q8NAF0 562 aaKnown RBP7.87□□□□□ -1.15
PDE6A-205ENST00000617647 SUCLG2Q96I99 432 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 MYD88Q99836 296 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 SLC39A3Q9BRY0 314 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 POLR3CQ9BUI4 534 aaPredicted RBP7.87□□□□□ -1.15
PDE6A-205ENST00000617647 KLHL4Q9C0H6 718 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 DDX56Q9NY93 547 aaKnown RBP7.87□□□□□ -1.15
PDE6A-205ENST00000617647 BCAP29Q9UHQ4 241 aa7.87□□□□□ -1.15
PDE6A-205ENST00000617647 FBP2O00757 339 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 KDM6AO15550 1401 aaPredicted RBP7.86□□□□□ -1.15
PDE6A-205ENST00000617647 EXOC3O60645 756 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 EEF1DP29692 281 aaKnown RBP7.86□□□□□ -1.15
PDE6A-205ENST00000617647 MNX1P50219 401 aaPredicted RBP7.86□□□□□ -1.15
PDE6A-205ENST00000617647 NEK3P51956 506 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 DPYDQ12882 1025 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 PABPC1LQ4VXU2 614 aaKnown RBP7.86□□□□□ -1.15
PDE6A-205ENST00000617647 ECHDC2Q86YB7 292 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 CALML4Q96GE6 196 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 TRIM56Q9BRZ2 755 aaKnown RBP7.86□□□□□ -1.15
PDE6A-205ENST00000617647 SEMA4AQ9H3S1 761 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 SSX2IPQ9Y2D8 614 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 COL3A1P02461 1466 aaPredicted RBP7.86□□□□□ -1.15
PDE6A-205ENST00000617647 I3L4J1 428 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms