RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 GPC3P51654 580 aa12.85□□□□□ -0.35
PDPN-211ENST00000617617 KCNA10Q16322 511 aa12.85□□□□□ -0.35
PDPN-211ENST00000617617 TSHZ1Q6ZSZ6 1077 aa12.85□□□□□ -0.35
PDPN-211ENST00000617617 SYCP3Q8IZU3 236 aa12.85□□□□□ -0.35
PDPN-211ENST00000617617 SETD4Q9NVD3 440 aa12.85□□□□□ -0.35
PDPN-211ENST00000617617 PRMT7Q9NVM4 692 aaPredicted RBP12.85□□□□□ -0.35
PDPN-211ENST00000617617 TANC1Q9C0D5 1861 aa12.85□□□□□ -0.35
PDPN-211ENST00000617617 ACKR2O00590 384 aa12.85□□□□□ -0.35
PDPN-211ENST00000617617 CAND2O75155 1236 aa12.85□□□□□ -0.35
PDPN-211ENST00000617617 GPR32O75388 356 aa12.85□□□□□ -0.35
PDPN-211ENST00000617617 PGK1P00558 417 aa12.85□□□□□ -0.35
PDPN-211ENST00000617617 TPM2P07951 284 aa12.85□□□□□ -0.35
PDPN-211ENST00000617617 HSPA8P11142 646 aaKnown RBP12.85□□□□□ -0.35
PDPN-211ENST00000617617 TBX2Q13207 712 aaPredicted RBP12.85□□□□□ -0.35
PDPN-211ENST00000617617 HIC1Q14526 733 aa12.85□□□□□ -0.35
PDPN-211ENST00000617617 SMYD5Q6GMV2 418 aa12.85□□□□□ -0.35
PDPN-211ENST00000617617 LRRC71Q8N4P6 559 aa12.85□□□□□ -0.35
PDPN-211ENST00000617617 ARRDC4Q8NCT1 418 aa12.85□□□□□ -0.35
PDPN-211ENST00000617617 ERGIC2Q96RQ1 377 aa12.85□□□□□ -0.35
PDPN-211ENST00000617617 CNTNAP2Q9UHC6 1331 aa12.85□□□□□ -0.35
PDPN-211ENST00000617617 GTPBP10A4D1E9 387 aaKnown RBP12.84□□□□□ -0.35
PDPN-211ENST00000617617 LRRIQ4A6NIV6 560 aa12.84□□□□□ -0.35
PDPN-211ENST00000617617 ASGR1P07306 291 aa12.84□□□□□ -0.35
PDPN-211ENST00000617617 EPB41P11171 864 aaKnown RBP12.84□□□□□ -0.35
PDPN-211ENST00000617617 ADSSP30520 456 aa12.84□□□□□ -0.35
PDPN-211ENST00000617617 CLCN3P51790 818 aa12.84□□□□□ -0.35
PDPN-211ENST00000617617 IRX5P78411 483 aaPredicted RBP12.84□□□□□ -0.35
PDPN-211ENST00000617617 VWA3BQ502W6 1294 aa12.84□□□□□ -0.35
PDPN-211ENST00000617617 C7orf31Q8N865 590 aa12.84□□□□□ -0.35
PDPN-211ENST00000617617 KIFC3Q9BVG8 833 aa12.84□□□□□ -0.35
PDPN-211ENST00000617617 MRPL4Q9BYD3 311 aaKnown RBP12.84□□□□□ -0.35
PDPN-211ENST00000617617 SUGCTQ9HAC7 445 aa12.84□□□□□ -0.35
PDPN-211ENST00000617617 PTPRHQ9HD43 1115 aa12.84□□□□□ -0.35
PDPN-211ENST00000617617 HDAC6Q9UBN7 1215 aa12.84□□□□□ -0.35
PDPN-211ENST00000617617 ABLIM1O14639 778 aa12.84□□□□□ -0.35
PDPN-211ENST00000617617 AKAP3O75969 853 aa12.84□□□□□ -0.35
PDPN-211ENST00000617617 MAPK6Q16659 721 aa12.84□□□□□ -0.35
PDPN-211ENST00000617617 AMHR2Q16671 573 aa12.84□□□□□ -0.35
PDPN-211ENST00000617617 TRMT1LQ7Z2T5 733 aaKnown RBP12.84□□□□□ -0.35
PDPN-211ENST00000617617 KSR1Q8IVT5 923 aa12.84□□□□□ -0.35
PDPN-211ENST00000617617 XXYLT1Q8NBI6 393 aa12.84□□□□□ -0.35
PDPN-211ENST00000617617 RNF149Q8NC42 400 aa12.84□□□□□ -0.35
PDPN-211ENST00000617617 ACO2Q99798 780 aaKnown RBP12.84□□□□□ -0.35
PDPN-211ENST00000617617 HSPBP1Q9NZL4 362 aa12.84□□□□□ -0.35
PDPN-211ENST00000617617 OGDHLQ9ULD0 1010 aa12.84□□□□□ -0.35
PDPN-211ENST00000617617 USP20Q9Y2K6 914 aa12.84□□□□□ -0.35
PDPN-211ENST00000617617 FRMD4BQ9Y2L6 1034 aa12.84□□□□□ -0.35
PDPN-211ENST00000617617 DAAM1Q9Y4D1 1078 aa12.84□□□□□ -0.35
PDPN-211ENST00000617617 CITO14578 2027 aa12.84□□□□□ -0.35
PDPN-211ENST00000617617 ACLYP53396 1101 aa12.84□□□□□ -0.35
PDPN-211ENST00000617617 NBPF20Q3BBV1 942 aa12.84□□□□□ -0.35
PDPN-211ENST00000617617 FIGNQ5HY92 759 aa12.84□□□□□ -0.35
PDPN-211ENST00000617617 CTU1Q7Z7A3 348 aaKnown RBP12.84□□□□□ -0.35
PDPN-211ENST00000617617 SERINC5Q86VE9 423 aa12.84□□□□□ -0.35
PDPN-211ENST00000617617 RHPN2Q8IUC4 686 aa12.84□□□□□ -0.35
PDPN-211ENST00000617617 MFSD14AQ96MC6 490 aa12.84□□□□□ -0.35
PDPN-211ENST00000617617 TNFSF13BQ9Y275 285 aa12.84□□□□□ -0.35
PDPN-211ENST00000617617 GRIN2DO15399 1336 aa12.83□□□□□ -0.36
PDPN-211ENST00000617617 A0A0B4J269 797 aa12.83□□□□□ -0.36
PDPN-211ENST00000617617 GOLGA6L6A8MZA4 724 aa12.83□□□□□ -0.36
PDPN-211ENST00000617617 ANKRD63C9JTQ0 380 aa12.83□□□□□ -0.36
PDPN-211ENST00000617617 DNM1LO00429 736 aa12.83□□□□□ -0.36
PDPN-211ENST00000617617 LDHAP00338 332 aaKnown RBP12.83□□□□□ -0.36
PDPN-211ENST00000617617 CLDN10P78369 228 aa12.83□□□□□ -0.36
PDPN-211ENST00000617617 MCL1Q07820 350 aa12.83□□□□□ -0.36
PDPN-211ENST00000617617 TRIM14Q14142 442 aa12.83□□□□□ -0.36
PDPN-211ENST00000617617 ARID5BQ14865 1188 aa12.83□□□□□ -0.36
PDPN-211ENST00000617617 KYAT1Q16773 422 aa12.83□□□□□ -0.36
PDPN-211ENST00000617617 INTS8Q75QN2 995 aaKnown RBP12.83□□□□□ -0.36
PDPN-211ENST00000617617 METTL13Q8N6R0 699 aa12.83□□□□□ -0.36
PDPN-211ENST00000617617 TMC2Q8TDI7 906 aa12.83□□□□□ -0.36
PDPN-211ENST00000617617 ARMC5Q96C12 935 aa12.83□□□□□ -0.36
PDPN-211ENST00000617617 CRISPLD2Q9H0B8 497 aa12.83□□□□□ -0.36
PDPN-211ENST00000617617 ARMCX3Q9UH62 379 aaPredicted RBP12.83□□□□□ -0.36
PDPN-211ENST00000617617 TOM1L1O75674 476 aa12.83□□□□□ -0.36
PDPN-211ENST00000617617 PRKCBP05771 671 aa12.83□□□□□ -0.36
PDPN-211ENST00000617617 CYP2C9P11712 490 aa12.83□□□□□ -0.36
PDPN-211ENST00000617617 MTIF2P46199 727 aaKnown RBP12.83□□□□□ -0.36
PDPN-211ENST00000617617 IGBP1P78318 339 aa12.83□□□□□ -0.36
PDPN-211ENST00000617617 RBL2Q08999 1139 aa12.83□□□□□ -0.36
PDPN-211ENST00000617617 FAM26DQ5JW98 314 aa12.83□□□□□ -0.36
PDPN-211ENST00000617617 ARMCX5Q6P1M9 558 aa12.83□□□□□ -0.36
PDPN-211ENST00000617617 FBXO46Q6PJ61 603 aaPredicted RBP12.83□□□□□ -0.36
PDPN-211ENST00000617617 FAM186BQ8IYM0 893 aa12.83□□□□□ -0.36
PDPN-211ENST00000617617 NOC4LQ9BVI4 516 aaKnown RBP12.83□□□□□ -0.36
PDPN-211ENST00000617617 INO80BQ9C086 356 aaPredicted RBP12.83□□□□□ -0.36
PDPN-211ENST00000617617 NDST4Q9H3R1 872 aa12.83□□□□□ -0.36
PDPN-211ENST00000617617 N4BP3O15049 544 aa12.82□□□□□ -0.36
PDPN-211ENST00000617617 P4HA2O15460 535 aa12.82□□□□□ -0.36
PDPN-211ENST00000617617 EXTL3O43909 919 aa12.82□□□□□ -0.36
PDPN-211ENST00000617617 FAM189A1O60320 539 aa12.82□□□□□ -0.36
PDPN-211ENST00000617617 AXLP30530 894 aa12.82□□□□□ -0.36
PDPN-211ENST00000617617 GTF2H1P32780 548 aa12.82□□□□□ -0.36
PDPN-211ENST00000617617 SPECC1LQ69YQ0 1117 aa12.82□□□□□ -0.36
PDPN-211ENST00000617617 CXCL17Q6UXB2 119 aa12.82□□□□□ -0.36
PDPN-211ENST00000617617 RUFY4Q6ZNE9 571 aa12.82□□□□□ -0.36
PDPN-211ENST00000617617 TAB2Q9NYJ8 693 aa12.82□□□□□ -0.36
PDPN-211ENST00000617617 HNRNPDLO14979 420 aaKnown RBP12.82□□□□□ -0.36
PDPN-211ENST00000617617 TREHO43280 583 aa12.82□□□□□ -0.36
PDPN-211ENST00000617617 EDN1P05305 212 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms