RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 HEXIM1O94992 359 aaKnown RBP15.64■□□□□ 0.09
SHROOM1-208ENST00000617339 GLI1P08151 1106 aa15.64■□□□□ 0.09
SHROOM1-208ENST00000617339 TMOD1P28289 359 aa15.64■□□□□ 0.09
SHROOM1-208ENST00000617339 QARSP47897 775 aaKnown RBP15.64■□□□□ 0.09
SHROOM1-208ENST00000617339 EPHA7Q15375 998 aa15.64■□□□□ 0.09
SHROOM1-208ENST00000617339 SNCBQ16143 134 aa15.64■□□□□ 0.09
SHROOM1-208ENST00000617339 HAUS6Q7Z4H7 955 aa15.64■□□□□ 0.09
SHROOM1-208ENST00000617339 PALB2Q86YC2 1186 aa15.64■□□□□ 0.09
SHROOM1-208ENST00000617339 CLEC4DQ8WXI8 215 aa15.64■□□□□ 0.09
SHROOM1-208ENST00000617339 SLC5A5Q92911 643 aa15.64■□□□□ 0.09
SHROOM1-208ENST00000617339 COL4A5P29400 1685 aa15.64■□□□□ 0.09
SHROOM1-208ENST00000617339 EVI5O60447 810 aa15.64■□□□□ 0.09
SHROOM1-208ENST00000617339 STAT1P42224 750 aa15.64■□□□□ 0.09
SHROOM1-208ENST00000617339 HYIQ5T013 277 aa15.64■□□□□ 0.09
SHROOM1-208ENST00000617339 NAIF1Q69YI7 327 aaPredicted RBP15.64■□□□□ 0.09
SHROOM1-208ENST00000617339 CDR2LQ86X02 465 aaPredicted RBP15.64■□□□□ 0.09
SHROOM1-208ENST00000617339 PPP1R13LQ8WUF5 828 aa15.64■□□□□ 0.09
SHROOM1-208ENST00000617339 POLR3CQ9BUI4 534 aaPredicted RBP15.64■□□□□ 0.09
SHROOM1-208ENST00000617339 KCNG1Q9UIX4 513 aa15.64■□□□□ 0.09
SHROOM1-208ENST00000617339 ZNF541Q9H0D2 1346 aa15.64■□□□□ 0.09
SHROOM1-208ENST00000617339 COL11A2P13942 1736 aaPredicted RBP15.63■□□□□ 0.09
SHROOM1-208ENST00000617339 NR3C2P08235 984 aa15.63■□□□□ 0.09
SHROOM1-208ENST00000617339 CBWD2Q8IUF1 395 aa15.63■□□□□ 0.09
SHROOM1-208ENST00000617339 DAW1Q8N136 415 aa15.63■□□□□ 0.09
SHROOM1-208ENST00000617339 GLG1Q92896 1179 aa15.63■□□□□ 0.09
SHROOM1-208ENST00000617339 TMEM143Q96AN5 459 aa15.63■□□□□ 0.09
SHROOM1-208ENST00000617339 TAS2R14Q9NYV8 317 aa15.63■□□□□ 0.09
SHROOM1-208ENST00000617339 DDX20Q9UHI6 824 aaKnown RBP15.63■□□□□ 0.09
SHROOM1-208ENST00000617339 DLEC1Q9Y238 1755 aa15.63■□□□□ 0.09
SHROOM1-208ENST00000617339 CCNE2O96020 404 aa15.63■□□□□ 0.09
SHROOM1-208ENST00000617339 P4HBP07237 508 aaKnown RBP15.63■□□□□ 0.09
SHROOM1-208ENST00000617339 SKOR1P84550 965 aa15.63■□□□□ 0.09
SHROOM1-208ENST00000617339 ALS2CLQ60I27 953 aa15.63■□□□□ 0.09
SHROOM1-208ENST00000617339 TLR10Q9BXR5 811 aa15.63■□□□□ 0.09
SHROOM1-208ENST00000617339 PITPNM2Q9BZ72 1349 aa15.63■□□□□ 0.09
SHROOM1-208ENST00000617339 FOXN3O00409 490 aaPredicted RBP15.63■□□□□ 0.09
SHROOM1-208ENST00000617339 DDX42Q86XP3 938 aaKnown RBP eCLIP15.63■□□□□ 0.09
SHROOM1-208ENST00000617339 MMGT1Q8N4V1 131 aa15.63■□□□□ 0.09
SHROOM1-208ENST00000617339 TEPSINQ96N21 525 aa15.63■□□□□ 0.09
SHROOM1-208ENST00000617339 DCAF8L1A6NGE4 600 aa15.62■□□□□ 0.09
SHROOM1-208ENST00000617339 ADM5C9JUS6 153 aa15.62■□□□□ 0.09
SHROOM1-208ENST00000617339 TNFAIP3P21580 790 aa15.62■□□□□ 0.09
SHROOM1-208ENST00000617339 IGBP1P78318 339 aa15.62■□□□□ 0.09
SHROOM1-208ENST00000617339 MYL7Q01449 175 aa15.62■□□□□ 0.09
SHROOM1-208ENST00000617339 PGM5Q15124 567 aa15.62■□□□□ 0.09
SHROOM1-208ENST00000617339 SLC18A3Q16572 532 aa15.62■□□□□ 0.09
SHROOM1-208ENST00000617339 SLC20A1Q8WUM9 679 aa15.62■□□□□ 0.09
SHROOM1-208ENST00000617339 ZBTB10Q96DT7 871 aa15.62■□□□□ 0.09
SHROOM1-208ENST00000617339 MBOAT7Q96N66 472 aa15.62■□□□□ 0.09
SHROOM1-208ENST00000617339 TSGA10Q9BZW7 698 aa15.62■□□□□ 0.09
SHROOM1-208ENST00000617339 LUC7LQ9NQ29 371 aaKnown RBP15.62■□□□□ 0.09
SHROOM1-208ENST00000617339 BAIAP2L1Q9UHR4 511 aa15.62■□□□□ 0.09
SHROOM1-208ENST00000617339 A0A1W2PQJ5 194 aa15.62■□□□□ 0.09
SHROOM1-208ENST00000617339 VWA5AO00534 786 aa15.62■□□□□ 0.09
SHROOM1-208ENST00000617339 KRT5P13647 590 aa15.62■□□□□ 0.09
SHROOM1-208ENST00000617339 PTGER2P43116 358 aa15.62■□□□□ 0.09
SHROOM1-208ENST00000617339 FMO5P49326 533 aa15.62■□□□□ 0.09
SHROOM1-208ENST00000617339 TGFB2P61812 414 aa15.62■□□□□ 0.09
SHROOM1-208ENST00000617339 PREPLQ4J6C6 727 aaPredicted RBP15.62■□□□□ 0.09
SHROOM1-208ENST00000617339 EMBQ6PCB8 327 aa15.62■□□□□ 0.09
SHROOM1-208ENST00000617339 FAM83AQ86UY5 434 aa15.62■□□□□ 0.09
SHROOM1-208ENST00000617339 PARP9Q8IXQ6 854 aa15.62■□□□□ 0.09
SHROOM1-208ENST00000617339 POMGNT1Q8WZA1 660 aa15.62■□□□□ 0.09
SHROOM1-208ENST00000617339 PDCD2LQ9BRP1 358 aa15.62■□□□□ 0.09
SHROOM1-208ENST00000617339 R3HDMLQ9H3Y0 253 aa15.62■□□□□ 0.09
SHROOM1-208ENST00000617339 ANKFY1Q9P2R3 1169 aa15.62■□□□□ 0.09
SHROOM1-208ENST00000617339 PDE4DIPQ5VU43 2346 aa15.62■□□□□ 0.09
SHROOM1-208ENST00000617339 DENND3A2RUS2 1198 aa15.62■□□□□ 0.09
SHROOM1-208ENST00000617339 GOLGA6L10A6NI86 522 aa15.62■□□□□ 0.09
SHROOM1-208ENST00000617339 EZRP15311 586 aaKnown RBP15.62■□□□□ 0.09
SHROOM1-208ENST00000617339 CDC25CP30307 473 aa15.62■□□□□ 0.09
SHROOM1-208ENST00000617339 SSR1P43307 286 aaKnown RBP15.62■□□□□ 0.09
SHROOM1-208ENST00000617339 RARRES1P49788 294 aa15.62■□□□□ 0.09
SHROOM1-208ENST00000617339 MCF2L2Q86YR7 1114 aa15.62■□□□□ 0.09
SHROOM1-208ENST00000617339 ZNF280CQ8ND82 737 aa15.62■□□□□ 0.09
SHROOM1-208ENST00000617339 BRCA2P51587 3418 aa15.62■□□□□ 0.09
SHROOM1-208ENST00000617339 PIK3CDO00329 1044 aa15.61■□□□□ 0.09
SHROOM1-208ENST00000617339 NOP56O00567 594 aaKnown RBP15.61■□□□□ 0.09
SHROOM1-208ENST00000617339 HNRNPDLO14979 420 aaKnown RBP15.61■□□□□ 0.09
SHROOM1-208ENST00000617339 BRD2P25440 801 aaKnown RBP15.61■□□□□ 0.09
SHROOM1-208ENST00000617339 GJC1P36383 396 aa15.61■□□□□ 0.09
SHROOM1-208ENST00000617339 PEX19P40855 299 aa15.61■□□□□ 0.09
SHROOM1-208ENST00000617339 MDH1P40925 334 aaKnown RBP15.61■□□□□ 0.09
SHROOM1-208ENST00000617339 EDRF1Q3B7T1 1238 aa15.61■□□□□ 0.09
SHROOM1-208ENST00000617339 C9orf131Q5VYM1 1079 aa15.61■□□□□ 0.09
SHROOM1-208ENST00000617339 PEX26Q7Z412 305 aa15.61■□□□□ 0.09
SHROOM1-208ENST00000617339 AGO4Q9HCK5 861 aaKnown RBP15.61■□□□□ 0.09
SHROOM1-208ENST00000617339 PPP1R9AQ9ULJ8 1098 aa15.61■□□□□ 0.09
SHROOM1-208ENST00000617339 PLAAQ9Y263 795 aa15.61■□□□□ 0.09
SHROOM1-208ENST00000617339 ANO9A1A5B4 782 aa15.61■□□□□ 0.09
SHROOM1-208ENST00000617339 ANKRD63C9JTQ0 380 aa15.61■□□□□ 0.09
SHROOM1-208ENST00000617339 WDR46O15213 610 aaKnown RBP15.61■□□□□ 0.09
SHROOM1-208ENST00000617339 SMTNP53814 917 aa15.61■□□□□ 0.09
SHROOM1-208ENST00000617339 OSTNP61366 133 aa15.61■□□□□ 0.09
SHROOM1-208ENST00000617339 RPS6KA1Q15418 735 aa15.61■□□□□ 0.09
SHROOM1-208ENST00000617339 CYB5D1Q6P9G0 228 aa15.61■□□□□ 0.09
SHROOM1-208ENST00000617339 MOXD1Q6UVY6 613 aa15.61■□□□□ 0.09
SHROOM1-208ENST00000617339 FRMD5Q7Z6J6 570 aa15.61■□□□□ 0.09
SHROOM1-208ENST00000617339 VPS36Q86VN1 386 aa15.61■□□□□ 0.09
SHROOM1-208ENST00000617339 DHX38Q92620 1227 aaKnown RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms