RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 FAM193BQ96PV7 902 aaPredicted RBP10.76□□□□□ -0.69
TARDBP-218ENST00000617172 POLR3CQ9BUI4 534 aaPredicted RBP10.76□□□□□ -0.69
TARDBP-218ENST00000617172 MINDY3Q9H8M7 445 aa10.76□□□□□ -0.69
TARDBP-218ENST00000617172 XPNPEP1Q9NQW7 623 aa10.76□□□□□ -0.69
TARDBP-218ENST00000617172 TBC1D13Q9NVG8 400 aa10.76□□□□□ -0.69
TARDBP-218ENST00000617172 DBR1Q9UK59 544 aaKnown RBP10.76□□□□□ -0.69
TARDBP-218ENST00000617172 BARX2Q9UMQ3 279 aaPredicted RBP10.76□□□□□ -0.69
TARDBP-218ENST00000617172 NOL7Q9UMY1 257 aaKnown RBP10.76□□□□□ -0.69
TARDBP-218ENST00000617172 KIF3AQ9Y496 699 aa10.76□□□□□ -0.69
TARDBP-218ENST00000617172 PCDHGC5Q9Y5F6 944 aa10.76□□□□□ -0.69
TARDBP-218ENST00000617172 IRAK3Q9Y616 596 aa10.76□□□□□ -0.69
TARDBP-218ENST00000617172 STK24Q9Y6E0 443 aa10.76□□□□□ -0.69
TARDBP-218ENST00000617172 LOXHD1Q8IVV2 1947 aa10.76□□□□□ -0.69
TARDBP-218ENST00000617172 HIDE1A8MVS5 230 aa10.75□□□□□ -0.69
TARDBP-218ENST00000617172 PRR33A8MZF0 331 aa10.75□□□□□ -0.69
TARDBP-218ENST00000617172 INO80B-WBP1J3KQ70 363 aa10.75□□□□□ -0.69
TARDBP-218ENST00000617172 CXCL14O95715 111 aa10.75□□□□□ -0.69
TARDBP-218ENST00000617172 GALTP07902 379 aa10.75□□□□□ -0.69
TARDBP-218ENST00000617172 OR52Z1P0C646 297 aa10.75□□□□□ -0.69
TARDBP-218ENST00000617172 SPATA31C1P0DKV0 1188 aa10.75□□□□□ -0.69
TARDBP-218ENST00000617172 NCLP19338 710 aaKnown RBP10.75□□□□□ -0.69
TARDBP-218ENST00000617172 RPA1P27694 616 aa10.75□□□□□ -0.69
TARDBP-218ENST00000617172 PBX3P40426 434 aa10.75□□□□□ -0.69
TARDBP-218ENST00000617172 GUCY1B3Q02153 619 aa10.75□□□□□ -0.69
TARDBP-218ENST00000617172 LONRF3Q496Y0 759 aa10.75□□□□□ -0.69
TARDBP-218ENST00000617172 TPRNQ4KMQ1 711 aa10.75□□□□□ -0.69
TARDBP-218ENST00000617172 AGMOQ6ZNB7 445 aa10.75□□□□□ -0.69
TARDBP-218ENST00000617172 CATSPER3Q86XQ3 398 aa10.75□□□□□ -0.69
TARDBP-218ENST00000617172 NOSTRINQ8IVI9 506 aa10.75□□□□□ -0.69
TARDBP-218ENST00000617172 VPS52Q8N1B4 723 aa10.75□□□□□ -0.69
TARDBP-218ENST00000617172 MCPH1Q8NEM0 835 aa10.75□□□□□ -0.69
TARDBP-218ENST00000617172 PIGOQ8TEQ8 1089 aa10.75□□□□□ -0.69
TARDBP-218ENST00000617172 LPPQ93052 612 aa10.75□□□□□ -0.69
TARDBP-218ENST00000617172 IGSF21Q96ID5 467 aa10.75□□□□□ -0.69
TARDBP-218ENST00000617172 KIF2CQ99661 725 aa10.75□□□□□ -0.69
TARDBP-218ENST00000617172 TMEM175Q9BSA9 504 aa10.75□□□□□ -0.69
TARDBP-218ENST00000617172 PHF7Q9BWX1 381 aaPredicted RBP10.75□□□□□ -0.69
TARDBP-218ENST00000617172 TMEM60Q9H2L4 133 aa10.75□□□□□ -0.69
TARDBP-218ENST00000617172 NRDE2Q9H7Z3 1164 aa10.75□□□□□ -0.69
TARDBP-218ENST00000617172 RSAD1Q9HA92 442 aa10.75□□□□□ -0.69
TARDBP-218ENST00000617172 BMP2KQ9NSY1 1161 aaPredicted RBP10.75□□□□□ -0.69
TARDBP-218ENST00000617172 INPP5FQ9Y2H2 1132 aa10.75□□□□□ -0.69
TARDBP-218ENST00000617172 HCN4Q9Y3Q4 1203 aa10.75□□□□□ -0.69
TARDBP-218ENST00000617172 USP15Q9Y4E8 981 aaPredicted RBP10.75□□□□□ -0.69
TARDBP-218ENST00000617172 C2orf71A6NGG8 1288 aa10.74□□□□□ -0.69
TARDBP-218ENST00000617172 POTEMA6NI47 508 aa10.74□□□□□ -0.69
TARDBP-218ENST00000617172 NT5C1B-RDH14C9J2C7 533 aa10.74□□□□□ -0.69
TARDBP-218ENST00000617172 WNT7AO00755 349 aa10.74□□□□□ -0.69
TARDBP-218ENST00000617172 ST18O60284 1047 aa10.74□□□□□ -0.69
TARDBP-218ENST00000617172 TSPAN1O60635 241 aa10.74□□□□□ -0.69
TARDBP-218ENST00000617172 NR1I2O75469 434 aa10.74□□□□□ -0.69
TARDBP-218ENST00000617172 CTSAP10619 480 aa10.74□□□□□ -0.69
TARDBP-218ENST00000617172 ITGA4P13612 1032 aa10.74□□□□□ -0.69
TARDBP-218ENST00000617172 U2AF2P26368 475 aaKnown RBP eCLIP10.74□□□□□ -0.693e-10■□□□□ 10
TARDBP-218ENST00000617172 TECP42680 631 aa10.74□□□□□ -0.69
TARDBP-218ENST00000617172 ITIH3Q06033 890 aa10.74□□□□□ -0.69
TARDBP-218ENST00000617172 PDIA5Q14554 519 aa10.74□□□□□ -0.69
TARDBP-218ENST00000617172 CBX2Q14781 532 aaPredicted RBP10.74□□□□□ -0.69
TARDBP-218ENST00000617172 RABEP1Q15276 862 aa10.74□□□□□ -0.69
TARDBP-218ENST00000617172 ZNF174Q15697 407 aa10.74□□□□□ -0.69
TARDBP-218ENST00000617172 C8orf34Q49A92 452 aa10.74□□□□□ -0.69
TARDBP-218ENST00000617172 HERC4Q5GLZ8 1057 aaPredicted RBP10.74□□□□□ -0.69
TARDBP-218ENST00000617172 UBXN11Q5T124 520 aa10.74□□□□□ -0.69
TARDBP-218ENST00000617172 HAUS3Q68CZ6 603 aa10.74□□□□□ -0.69
TARDBP-218ENST00000617172 ANKRD54Q6NXT1 300 aa10.74□□□□□ -0.69
TARDBP-218ENST00000617172 PPFIBP1Q86W92 1011 aa10.74□□□□□ -0.69
TARDBP-218ENST00000617172 RNF135Q8IUD6 432 aa10.74□□□□□ -0.69
TARDBP-218ENST00000617172 VN1R2Q8NFZ6 395 aa10.74□□□□□ -0.69
TARDBP-218ENST00000617172 SUSD6Q92537 303 aa10.74□□□□□ -0.69
TARDBP-218ENST00000617172 PRIMPOLQ96LW4 560 aa10.74□□□□□ -0.69
TARDBP-218ENST00000617172 RAB34Q9BZG1 259 aa10.74□□□□□ -0.69
TARDBP-218ENST00000617172 TRIM6Q9C030 488 aaPredicted RBP10.74□□□□□ -0.69
TARDBP-218ENST00000617172 CSRNP2Q9H175 543 aa10.74□□□□□ -0.69
TARDBP-218ENST00000617172 UPF2Q9HAU5 1272 aaKnown RBP10.74□□□□□ -0.69
TARDBP-218ENST00000617172 FAN1Q9Y2M0 1017 aa10.74□□□□□ -0.69
TARDBP-218ENST00000617172 FNDC1Q4ZHG4 1894 aaPredicted RBP10.74□□□□□ -0.69
TARDBP-218ENST00000617172 A0A1B0GUA9 196 aa10.73□□□□□ -0.69
TARDBP-218ENST00000617172 MEIS3P2A8K0S8 358 aa10.73□□□□□ -0.69
TARDBP-218ENST00000617172 LOC730098B7Z3J9 87 aa10.73□□□□□ -0.69
TARDBP-218ENST00000617172 LAD1O00515 517 aa10.73□□□□□ -0.69
TARDBP-218ENST00000617172 INPPL1O15357 1258 aa10.73□□□□□ -0.69
TARDBP-218ENST00000617172 USO1O60763 962 aaKnown RBP10.73□□□□□ -0.69
TARDBP-218ENST00000617172 GLRA2P23416 452 aa10.73□□□□□ -0.69
TARDBP-218ENST00000617172 FXR2P51116 673 aaKnown RBP eCLIP10.73□□□□□ -0.692e-7■■□□□ 11.5
TARDBP-218ENST00000617172 MBTD1Q05BQ5 628 aa10.73□□□□□ -0.69
TARDBP-218ENST00000617172 CAPSQ13938 189 aa10.73□□□□□ -0.69
TARDBP-218ENST00000617172 TTC38Q5R3I4 469 aa10.73□□□□□ -0.69
TARDBP-218ENST00000617172 CES5AQ6NT32 575 aa10.73□□□□□ -0.69
TARDBP-218ENST00000617172 ASAP3Q8TDY4 903 aa10.73□□□□□ -0.69
TARDBP-218ENST00000617172 NECTIN4Q96NY8 510 aa10.73□□□□□ -0.69
TARDBP-218ENST00000617172 GBP3Q9H0R5 595 aa10.73□□□□□ -0.69
TARDBP-218ENST00000617172 ZBP1Q9H171 429 aa10.73□□□□□ -0.69
TARDBP-218ENST00000617172 POLR3FQ9H1D9 316 aaPredicted RBP10.73□□□□□ -0.69
TARDBP-218ENST00000617172 C2orf40Q9H1Z8 148 aa10.73□□□□□ -0.69
TARDBP-218ENST00000617172 S1PR5Q9H228 398 aa10.73□□□□□ -0.69
TARDBP-218ENST00000617172 C11orf16Q9NQ32 467 aa10.73□□□□□ -0.69
TARDBP-218ENST00000617172 SSX2IPQ9Y2D8 614 aa10.73□□□□□ -0.69
TARDBP-218ENST00000617172 GIT1Q9Y2X7 761 aa10.73□□□□□ -0.69
TARDBP-218ENST00000617172 IPPQ9Y573 584 aa10.73□□□□□ -0.69
TARDBP-218ENST00000617172 HCFC2Q9Y5Z7 792 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms