RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 POTECB2RU33 542 aa11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 IGF2BP3O00425 579 aaKnown RBP eCLIP11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 PHF2O75151 1096 aa11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 PRKG1Q13976 671 aa11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 CYTH1Q15438 398 aa11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 MTERF2Q49AM1 385 aa11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 POTEBQ6S5H4 581 aa11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 KIF2BQ8N4N8 673 aa11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 CCNYL1Q8N7R7 359 aa11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 IGBP1P78318 339 aa11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 HIF1AQ16665 826 aa11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 PAGR1Q9BTK6 254 aa11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 MOV10L1Q9BXT6 1211 aaKnown RBP11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 BARHL2Q9NY43 387 aa11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 DBR1Q9UK59 544 aaKnown RBP11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 HEY1Q9Y5J3 304 aa11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 CFAP65Q6ZU64 1925 aaKnown RBP11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 USP42Q9H9J4 1324 aaKnown RBP11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 LOC102724428A0A0B4J2F2 783 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 H3BRJ5 948 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 ARHGEF9O43307 516 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 KDM1AO60341 852 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 ENO1P06733 434 aaKnown RBP11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 PAMP19021 973 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 CRKLP46109 303 aaKnown RBP11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 SIK1P57059 783 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 CYLC2Q14093 348 aaPredicted RBP11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 LONRF1Q17RB8 773 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 USPL1Q5W0Q7 1092 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 TMEM270Q6UE05 265 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 PASD1Q8IV76 773 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 ENGASEQ8NFI3 743 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 MYCBPAPQ8TBZ2 947 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 MTBPQ96DY7 904 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 TSSK1BQ9BXA7 367 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 GCOM2Q9BZD3 368 aaPredicted RBP11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 NBPF3Q9H094 633 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 ZBTB5O15062 677 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 RHOBTB3O94955 611 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 KRT4P19013 534 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 POLD1P28340 1107 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 PMLP29590 882 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 HOXA13P31271 388 aaPredicted RBP11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 PAPOLAP51003 745 aaKnown RBP11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 ZNF667Q5HYK9 610 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 ZBTB33Q86T24 672 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 PPCSQ9HAB8 311 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 NPHS2Q9NP85 383 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 DDX56Q9NY93 547 aaKnown RBP11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 SUCLA2Q9P2R7 463 aaPredicted RBP11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 ARHGAP26Q9UNA1 814 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 REREQ9P2R6 1566 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 TMEM120BA0PK00 339 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 ASAP2O43150 1006 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 PSAPP07602 524 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 ARSEP51690 589 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 DAB2IPQ5VWQ8 1189 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 PPP1R18Q6NYC8 613 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 TRIM72Q6ZMU5 477 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 SIX6OS1Q8N1H7 587 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 AGPAT1Q99943 283 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 KLHL8Q9P2G9 620 aaPredicted RBP11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 GALCP54803 685 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 MAPRE2Q15555 327 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 ZNF394Q53GI3 561 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 ENOSF1Q7L5Y1 443 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 USP38Q8NB14 1042 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 NCLNQ969V3 563 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 HIC2Q96JB3 615 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 RBM15Q96T37 977 aaKnown RBP eCLIP11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 ALG13Q9NP73 1137 aaKnown RBP11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 TBC1D23Q9NUY8 699 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 PCDHA6Q9UN73 950 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 INPP5FQ9Y2H2 1132 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 PCDHA8Q9Y5H6 950 aa11.31□□□□□ -0.6
CLTCL1-209ENST00000617103 GDF11O95390 407 aa11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 APOA1P02647 267 aa11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 KCNA4P22459 653 aa11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 SERPINB3P29508 390 aa11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 TYK2P29597 1187 aa11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 AARSP49588 968 aaKnown RBP eCLIP11.3□□□□□ -0.63e-6■■■■■ 61.8
CLTCL1-209ENST00000617103 GRM4Q14833 912 aa11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 ARL13BQ3SXY8 428 aa11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 ZBTB41Q5SVQ8 909 aa11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 PADI6Q6TGC4 694 aa11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 FOXP3Q9BZS1 431 aa11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 UBN1Q9NPG3 1134 aa11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 SMARCAL1Q9NZC9 954 aa11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 NCOA3Q9Y6Q9 1424 aa11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 SERPINB2P05120 415 aa11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 ACADSP16219 412 aa11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 IL10P22301 178 aa11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 SLC1A1P43005 524 aa11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 ERFP50548 548 aa11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 PSMC1P62191 440 aaKnown RBP11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 KCNK16Q96T55 309 aa11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 APOL6Q9BWW8 343 aa11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 PI4KBQ9UBF8 816 aa11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 SLC9A2Q9UBY0 812 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms