RNA–Protein interactions for RNA: ENST00000615940.4

LRTOMT-222, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, human

TSL 5 BASIC

Gene LRTOMT, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRTOMT-222	ENST00000615940	NIM1K	Q8IY84	436 aa		10.38	□□□□□ -0.75
LRTOMT-222	ENST00000615940	COLGALT2	Q8IYK4	626 aa		10.38	□□□□□ -0.75
LRTOMT-222	ENST00000615940	OR6C4	Q8NGE1	309 aa		10.38	□□□□□ -0.75
LRTOMT-222	ENST00000615940	ARL5B	Q96KC2	179 aa		10.38	□□□□□ -0.75
LRTOMT-222	ENST00000615940	DBNDD2	Q9BQY9	259 aa		10.38	□□□□□ -0.75
LRTOMT-222	ENST00000615940	CYP4F12	Q9HCS2	524 aa		10.38	□□□□□ -0.75
LRTOMT-222	ENST00000615940	NLRC4	Q9NPP4	1024 aa		10.38	□□□□□ -0.75
LRTOMT-222	ENST00000615940	ANKEF1	Q9NU02	776 aa		10.38	□□□□□ -0.75
LRTOMT-222	ENST00000615940	BLOC1S4	Q9NUP1	217 aa		10.38	□□□□□ -0.75
LRTOMT-222	ENST00000615940	TTC7A	Q9ULT0	858 aa	Predicted RBP	10.38	□□□□□ -0.75
LRTOMT-222	ENST00000615940	PCDHB13	Q9Y5F0	798 aa		10.38	□□□□□ -0.75
LRTOMT-222	ENST00000615940		G3V3G9	751 aa		10.38	□□□□□ -0.75
LRTOMT-222	ENST00000615940	AP3B1	O00203	1094 aa		10.38	□□□□□ -0.75
LRTOMT-222	ENST00000615940	RAD17	O75943	681 aa		10.38	□□□□□ -0.75
LRTOMT-222	ENST00000615940	HTR3A	P46098	478 aa		10.38	□□□□□ -0.75
LRTOMT-222	ENST00000615940	GPC3	P51654	580 aa		10.38	□□□□□ -0.75
LRTOMT-222	ENST00000615940	ATP2B2	Q01814	1243 aa		10.38	□□□□□ -0.75
LRTOMT-222	ENST00000615940	ACY1	Q03154	408 aa		10.38	□□□□□ -0.75
LRTOMT-222	ENST00000615940	MAP2K5	Q13163	448 aa		10.38	□□□□□ -0.75
LRTOMT-222	ENST00000615940	PSMD6	Q15008	389 aa		10.38	□□□□□ -0.75
LRTOMT-222	ENST00000615940	MAPRE2	Q15555	327 aa		10.38	□□□□□ -0.75
LRTOMT-222	ENST00000615940	INSC	Q1MX18	579 aa		10.38	□□□□□ -0.75
LRTOMT-222	ENST00000615940	ZNF792	Q3KQV3	632 aa		10.38	□□□□□ -0.75
LRTOMT-222	ENST00000615940	INTS11	Q5TA45	600 aa	Known RBP	10.38	□□□□□ -0.75
LRTOMT-222	ENST00000615940	DCAF8	Q5TAQ9	597 aa		10.38	□□□□□ -0.75
LRTOMT-222	ENST00000615940	TLDC1	Q6P9B6	456 aa		10.38	□□□□□ -0.75
LRTOMT-222	ENST00000615940	AACS	Q86V21	672 aa		10.38	□□□□□ -0.75
LRTOMT-222	ENST00000615940	SYTL1	Q8IYJ3	562 aa		10.38	□□□□□ -0.75
LRTOMT-222	ENST00000615940	MAGEC3	Q8TD91	643 aa		10.38	□□□□□ -0.75
LRTOMT-222	ENST00000615940	DYDC1	Q8WWB3	177 aa		10.38	□□□□□ -0.75
LRTOMT-222	ENST00000615940	SGK3	Q96BR1	496 aa		10.38	□□□□□ -0.75
LRTOMT-222	ENST00000615940	NTPCR	Q9BSD7	190 aa	Known RBP	10.38	□□□□□ -0.75
LRTOMT-222	ENST00000615940	USP26	Q9BXU7	913 aa		10.38	□□□□□ -0.75
LRTOMT-222	ENST00000615940	FAM126A	Q9BYI3	521 aa	Predicted RBP	10.38	□□□□□ -0.75
LRTOMT-222	ENST00000615940	MTMR12	Q9C0I1	747 aa		10.38	□□□□□ -0.75
LRTOMT-222	ENST00000615940	EHMT1	Q9H9B1	1298 aa		10.38	□□□□□ -0.75
LRTOMT-222	ENST00000615940	CD209	Q9NNX6	404 aa		10.38	□□□□□ -0.75
LRTOMT-222	ENST00000615940	DBNL	Q9UJU6	430 aa	Known RBP	10.38	□□□□□ -0.75
LRTOMT-222	ENST00000615940	DSE	Q9UL01	958 aa		10.38	□□□□□ -0.75
LRTOMT-222	ENST00000615940	CORO1C	Q9ULV4	474 aa	Predicted RBP	10.38	□□□□□ -0.75
LRTOMT-222	ENST00000615940	SH3GLB1	Q9Y371	365 aa		10.38	□□□□□ -0.75
LRTOMT-222	ENST00000615940	ACSL4	O60488	711 aa		10.37	□□□□□ -0.75
LRTOMT-222	ENST00000615940	TIPRL	O75663	272 aa		10.37	□□□□□ -0.75
LRTOMT-222	ENST00000615940	ITGB1	P05556	798 aa		10.37	□□□□□ -0.75
LRTOMT-222	ENST00000615940	RHOXF2B	P0C7M4	288 aa		10.37	□□□□□ -0.75
LRTOMT-222	ENST00000615940	CAPN3	P20807	821 aa		10.37	□□□□□ -0.75
LRTOMT-222	ENST00000615940	IL10	P22301	178 aa		10.37	□□□□□ -0.75
LRTOMT-222	ENST00000615940	HIBADH	P31937	336 aa	Known RBP	10.37	□□□□□ -0.75
LRTOMT-222	ENST00000615940	NAA25	Q14CX7	972 aa		10.37	□□□□□ -0.75
LRTOMT-222	ENST00000615940	STK11	Q15831	433 aa		10.37	□□□□□ -0.75
LRTOMT-222	ENST00000615940	CLUL1	Q15846	466 aa		10.37	□□□□□ -0.75
LRTOMT-222	ENST00000615940	SNCB	Q16143	134 aa		10.37	□□□□□ -0.75
LRTOMT-222	ENST00000615940	PABPC1L	Q4VXU2	614 aa	Known RBP	10.37	□□□□□ -0.75
LRTOMT-222	ENST00000615940	OTUD7B	Q6GQQ9	843 aa		10.37	□□□□□ -0.75
LRTOMT-222	ENST00000615940	C15orf52	Q6ZUT6	534 aa	Known RBP	10.37	□□□□□ -0.75
LRTOMT-222	ENST00000615940	C16orf71	Q8IYS4	520 aa	Predicted RBP	10.37	□□□□□ -0.75
LRTOMT-222	ENST00000615940	GOT1L1	Q8NHS2	421 aa	Predicted RBP	10.37	□□□□□ -0.75
LRTOMT-222	ENST00000615940	NOC3L	Q8WTT2	800 aa	Known RBP	10.37	□□□□□ -0.75
LRTOMT-222	ENST00000615940	ABHD8	Q96I13	439 aa		10.37	□□□□□ -0.75
LRTOMT-222	ENST00000615940	TNIP3	Q96KP6	325 aa		10.37	□□□□□ -0.75
LRTOMT-222	ENST00000615940	FAM167A	Q96KS9	214 aa		10.37	□□□□□ -0.75
LRTOMT-222	ENST00000615940	RHOXF2	Q9BQY4	288 aa		10.37	□□□□□ -0.75
LRTOMT-222	ENST00000615940	ZPBP	Q9BS86	351 aa		10.37	□□□□□ -0.75
LRTOMT-222	ENST00000615940	MXD3	Q9BW11	206 aa		10.37	□□□□□ -0.75
LRTOMT-222	ENST00000615940	ACAD9	Q9H845	621 aa		10.37	□□□□□ -0.75
LRTOMT-222	ENST00000615940	PRM3	Q9NNZ6	103 aa		10.37	□□□□□ -0.75
LRTOMT-222	ENST00000615940	GALNT8	Q9NY28	637 aa		10.37	□□□□□ -0.75
LRTOMT-222	ENST00000615940	PPARGC1A	Q9UBK2	798 aa	Known RBP	10.37	□□□□□ -0.75
LRTOMT-222	ENST00000615940	SH3BGRL2	Q9UJC5	107 aa		10.37	□□□□□ -0.75
LRTOMT-222	ENST00000615940	EXOC7	Q9UPT5	735 aa		10.37	□□□□□ -0.75
LRTOMT-222	ENST00000615940	COL1A1	P02452	1464 aa	Predicted RBP	10.37	□□□□□ -0.75
LRTOMT-222	ENST00000615940	ARHGAP10	A1A4S6	786 aa		10.36	□□□□□ -0.75
LRTOMT-222	ENST00000615940		J3KRW8	73 aa		10.36	□□□□□ -0.75
LRTOMT-222	ENST00000615940	FZD9	O00144	591 aa		10.36	□□□□□ -0.75
LRTOMT-222	ENST00000615940	CACNB4	O00305	520 aa	Predicted RBP	10.36	□□□□□ -0.75
LRTOMT-222	ENST00000615940	ENC1	O14682	589 aa		10.36	□□□□□ -0.75
LRTOMT-222	ENST00000615940	GPR37	O15354	613 aa		10.36	□□□□□ -0.75
LRTOMT-222	ENST00000615940	TLR3	O15455	904 aa	Known RBP	10.36	□□□□□ -0.75
LRTOMT-222	ENST00000615940	SLC7A4	O43246	635 aa		10.36	□□□□□ -0.75
LRTOMT-222	ENST00000615940	TOP1	P11387	765 aa	Known RBP	10.36	□□□□□ -0.75
LRTOMT-222	ENST00000615940	HOXB1	P14653	301 aa	Predicted RBP	10.36	□□□□□ -0.75
LRTOMT-222	ENST00000615940	ADH7	P40394	386 aa		10.36	□□□□□ -0.75
LRTOMT-222	ENST00000615940	CXCL9	Q07325	125 aa		10.36	□□□□□ -0.75
LRTOMT-222	ENST00000615940	NIPAL4	Q0D2K0	466 aa		10.36	□□□□□ -0.75
LRTOMT-222	ENST00000615940	FAM26D	Q5JW98	314 aa		10.36	□□□□□ -0.75
LRTOMT-222	ENST00000615940	VPS37D	Q86XT2	251 aa		10.36	□□□□□ -0.75
LRTOMT-222	ENST00000615940	SMARCE1	Q969G3	411 aa		10.36	□□□□□ -0.75
LRTOMT-222	ENST00000615940	RNF34	Q969K3	372 aa		10.36	□□□□□ -0.75
LRTOMT-222	ENST00000615940	ZNF653	Q96CK0	615 aa		10.36	□□□□□ -0.75
LRTOMT-222	ENST00000615940	PRPF18	Q99633	342 aa	Known RBP	10.36	□□□□□ -0.75
LRTOMT-222	ENST00000615940	STMN4	Q9H169	189 aa	Predicted RBP	10.36	□□□□□ -0.75
LRTOMT-222	ENST00000615940	VPS11	Q9H270	941 aa		10.36	□□□□□ -0.75
LRTOMT-222	ENST00000615940	MMRN2	Q9H8L6	949 aa		10.36	□□□□□ -0.75
LRTOMT-222	ENST00000615940	KANSL2	Q9H9L4	492 aa		10.36	□□□□□ -0.75
LRTOMT-222	ENST00000615940	KIAA1586	Q9HCI6	787 aa		10.36	□□□□□ -0.75
LRTOMT-222	ENST00000615940	ALG13	Q9NP73	1137 aa	Known RBP	10.36	□□□□□ -0.75
LRTOMT-222	ENST00000615940	ANO2	Q9NQ90	1003 aa		10.36	□□□□□ -0.75
LRTOMT-222	ENST00000615940	ARHGAP28	Q9P2N2	729 aa		10.36	□□□□□ -0.75
LRTOMT-222	ENST00000615940	ATXN10	Q9UBB4	475 aa		10.36	□□□□□ -0.75
LRTOMT-222	ENST00000615940	ZNRF3	Q9ULT6	936 aa		10.36	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms