RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 DDX27Q96GQ7 796 aaKnown RBP10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 PHF20Q9BVI0 1012 aa10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 TMEM39AQ9NV64 488 aa10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 TLDC2A0PJX2 215 aa10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 CLTAP09496 248 aa10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 KRT15P19012 456 aa10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 THPOP40225 353 aa10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 HERVK_113P62684 666 aa10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 CACNB1Q02641 598 aaPredicted RBP10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 KCNB1Q14721 858 aa10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 PCBP1Q15365 356 aaKnown RBP eCLIP10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 BSPRYQ5W0U4 402 aa10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 RWDD4Q6NW29 188 aaKnown RBP10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 STAG2Q8N3U4 1231 aa10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 ZKSCAN4Q969J2 545 aaPredicted RBP10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 XPO4Q9C0E2 1151 aaKnown RBP10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 NDST4Q9H3R1 872 aa10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 SP110Q9HB58 689 aa10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 FAM217BQ9NTX9 383 aaPredicted RBP10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 ATP11BQ9Y2G3 1177 aa10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 IQCB1Q15051 598 aa10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 CYP4A22Q5TCH4 519 aa10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 TAF2Q6P1X5 1199 aa10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 KLC3Q6P597 504 aa10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 YME1L1Q96TA2 773 aa10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 SPATC1LQ9H0A9 340 aa10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 MIF4GDA9UHW6 222 aaKnown RBP10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 NEMP1O14524 444 aa10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 P4HA2O15460 535 aa10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 KRT7P08729 469 aa10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 TCF7P36402 384 aaPredicted RBP10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 SP3Q02447 781 aa10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 RPS6KA2Q15349 733 aa10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 LONRF3Q496Y0 759 aa10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 TDRD10Q5VZ19 366 aaKnown RBP10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 ABHD16BQ9H3Z7 469 aa10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 GOLGA8IPA6NC78 632 aa10.41□□□□□ -0.74
TNFRSF9-204ENST00000615230 GOLGA8JA6NMD2 632 aa10.41□□□□□ -0.74
TNFRSF9-204ENST00000615230 ZW10O43264 779 aa10.41□□□□□ -0.74
TNFRSF9-204ENST00000615230 TOB2Q14106 344 aaPredicted RBP10.41□□□□□ -0.74
TNFRSF9-204ENST00000615230 CPLX4Q7Z7G2 160 aa10.41□□□□□ -0.74
TNFRSF9-204ENST00000615230 CDKL3Q8IVW4 592 aaPredicted RBP10.41□□□□□ -0.74
TNFRSF9-204ENST00000615230 GUF1Q8N442 669 aaKnown RBP10.41□□□□□ -0.74
TNFRSF9-204ENST00000615230 GDAP1Q8TB36 358 aa10.41□□□□□ -0.74
TNFRSF9-204ENST00000615230 DISP2A7MBM2 1401 aa10.41□□□□□ -0.74
TNFRSF9-204ENST00000615230 NPM3O75607 178 aaKnown RBP10.41□□□□□ -0.74
TNFRSF9-204ENST00000615230 FGFR2P21802 821 aa10.41□□□□□ -0.74
TNFRSF9-204ENST00000615230 N4BP2L2Q92802 583 aaPredicted RBP10.41□□□□□ -0.74
TNFRSF9-204ENST00000615230 CPA4Q9UI42 421 aa10.41□□□□□ -0.74
TNFRSF9-204ENST00000615230 PCDHA5Q9Y5H7 936 aa10.41□□□□□ -0.74
TNFRSF9-204ENST00000615230 GLTPD2A6NH11 291 aa10.41□□□□□ -0.74
TNFRSF9-204ENST00000615230 VCAM1P19320 739 aa10.41□□□□□ -0.74
TNFRSF9-204ENST00000615230 TCP11X2Q5H9J9 407 aa10.41□□□□□ -0.74
TNFRSF9-204ENST00000615230 CCDC121Q6ZUS5 278 aa10.41□□□□□ -0.74
TNFRSF9-204ENST00000615230 KLHL7Q8IXQ5 586 aa10.41□□□□□ -0.74
TNFRSF9-204ENST00000615230 FAM163AQ96GL9 167 aaPredicted RBP10.41□□□□□ -0.74
TNFRSF9-204ENST00000615230 HAUS8Q9BT25 410 aa10.41□□□□□ -0.74
TNFRSF9-204ENST00000615230 KLC2Q9H0B6 622 aa10.41□□□□□ -0.74
TNFRSF9-204ENST00000615230 JMJD4Q9H9V9 463 aa10.41□□□□□ -0.74
TNFRSF9-204ENST00000615230 TACC3Q9Y6A5 838 aa10.41□□□□□ -0.74
TNFRSF9-204ENST00000615230 LOC102724159A0A0B4J2E5 919 aa10.41□□□□□ -0.74
TNFRSF9-204ENST00000615230 SLC2A3P11169 496 aa10.41□□□□□ -0.74
TNFRSF9-204ENST00000615230 KPNA1P52294 538 aaPredicted RBP10.41□□□□□ -0.74
TNFRSF9-204ENST00000615230 RPL10AP62906 217 aaKnown RBP10.41□□□□□ -0.74
TNFRSF9-204ENST00000615230 PWP2Q15269 919 aaKnown RBP10.41□□□□□ -0.74
TNFRSF9-204ENST00000615230 ANO4Q32M45 955 aa10.41□□□□□ -0.74
TNFRSF9-204ENST00000615230 CCDC62Q6P9F0 684 aa10.41□□□□□ -0.74
TNFRSF9-204ENST00000615230 CTAGE3PQ8IX95 158 aa10.41□□□□□ -0.74
TNFRSF9-204ENST00000615230 NUDCD1Q96RS6 583 aa10.41□□□□□ -0.74
TNFRSF9-204ENST00000615230 THG1LQ9NWX6 298 aaKnown RBP10.41□□□□□ -0.74
TNFRSF9-204ENST00000615230 ADAMTSL3P82987 1691 aa10.41□□□□□ -0.74
TNFRSF9-204ENST00000615230 ZWINTO95229 277 aa10.4□□□□□ -0.74
TNFRSF9-204ENST00000615230 IFNB1P01574 187 aa10.4□□□□□ -0.74
TNFRSF9-204ENST00000615230 TROVE2P10155 538 aaKnown RBP eCLIP10.4□□□□□ -0.74
TNFRSF9-204ENST00000615230 MESDQ14696 234 aa10.4□□□□□ -0.74
TNFRSF9-204ENST00000615230 CCDC6Q16204 474 aa10.4□□□□□ -0.74
TNFRSF9-204ENST00000615230 EPAS1Q99814 870 aa10.4□□□□□ -0.74
TNFRSF9-204ENST00000615230 POTEMA6NI47 508 aa10.4□□□□□ -0.74
TNFRSF9-204ENST00000615230 POTECB2RU33 542 aa10.4□□□□□ -0.74
TNFRSF9-204ENST00000615230 EXTL3O43909 919 aa10.4□□□□□ -0.74
TNFRSF9-204ENST00000615230 ZBED1O96006 694 aa10.4□□□□□ -0.74
TNFRSF9-204ENST00000615230 ZBTB48P10074 688 aaPredicted RBP10.4□□□□□ -0.74
TNFRSF9-204ENST00000615230 TM4SF1P30408 202 aa10.4□□□□□ -0.74
TNFRSF9-204ENST00000615230 EIF2B5Q13144 721 aaKnown RBP10.4□□□□□ -0.74
TNFRSF9-204ENST00000615230 DACT2Q5SW24 774 aa10.4□□□□□ -0.74
TNFRSF9-204ENST00000615230 RABGGTAQ92696 567 aa10.4□□□□□ -0.74
TNFRSF9-204ENST00000615230 APBA2Q99767 749 aa10.4□□□□□ -0.74
TNFRSF9-204ENST00000615230 BPIFA3Q9BQP9 254 aa10.4□□□□□ -0.74
TNFRSF9-204ENST00000615230 CCSER1Q9C0I3 900 aa10.4□□□□□ -0.74
TNFRSF9-204ENST00000615230 INTS2Q9H0H0 1204 aaKnown RBP10.4□□□□□ -0.74
TNFRSF9-204ENST00000615230 EPN1Q9Y6I3 576 aaPredicted RBP10.4□□□□□ -0.74
TNFRSF9-204ENST00000615230 SMIM23A6NLE4 172 aa10.4□□□□□ -0.74
TNFRSF9-204ENST00000615230 E9PMD0 336 aa10.4□□□□□ -0.74
TNFRSF9-204ENST00000615230 GFPT2O94808 682 aa10.4□□□□□ -0.74
TNFRSF9-204ENST00000615230 ECEL1O95672 775 aa10.4□□□□□ -0.74
TNFRSF9-204ENST00000615230 RAG1P15918 1043 aa10.4□□□□□ -0.74
TNFRSF9-204ENST00000615230 TAF6P49848 677 aa10.4□□□□□ -0.74
TNFRSF9-204ENST00000615230 FXR2P51116 673 aaKnown RBP eCLIP10.4□□□□□ -0.74
TNFRSF9-204ENST00000615230 PTPROQ16827 1216 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms