RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 TERF1P54274 439 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 WNT7BP56706 349 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 TMEM62Q0P6H9 643 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 KIAA0753Q2KHM9 967 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 EPC2Q52LR7 807 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 FIGNQ5HY92 759 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 CELF3Q5SZQ8 465 aaKnown RBP3.74□□□□□ -1.81
LIG4-205ENST00000614526 METTL7BQ6UX53 244 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 PHLDB2Q86SQ0 1253 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 GLYCTKQ8IVS8 523 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 ZC3H3Q8IXZ2 948 aaKnown RBP3.74□□□□□ -1.81
LIG4-205ENST00000614526 RNF149Q8NC42 400 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 U2AF1L4Q8WU68 220 aaKnown RBP3.74□□□□□ -1.81
LIG4-205ENST00000614526 AFG1LQ8WV93 481 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 KIFAP3Q92845 792 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 GPR20Q99678 358 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 NAPGQ99747 312 aaPredicted RBP3.74□□□□□ -1.81
LIG4-205ENST00000614526 RHOXF2Q9BQY4 288 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 PDE11AQ9HCR9 933 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 HYOU1Q9Y4L1 999 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 KIAA1217Q5T5P2 1943 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 MYH11P35749 1972 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 DICER1Q9UPY3 1922 aaKnown RBP3.74□□□□□ -1.81
LIG4-205ENST00000614526 INO80B-WBP1J3KQ70 363 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 SLC16A3O15427 465 aaKnown RBP3.73□□□□□ -1.81
LIG4-205ENST00000614526 CTIFO43310 598 aaKnown RBP3.73□□□□□ -1.81
LIG4-205ENST00000614526 EVI5O60447 810 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 DKC1O60832 514 aaKnown RBP eCLIP3.73□□□□□ -1.81
LIG4-205ENST00000614526 STAM2O75886 525 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 FTCDO95954 541 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 MAPTP10636 758 aaKnown RBP3.73□□□□□ -1.81
LIG4-205ENST00000614526 TNNI1P19237 187 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 CYP2B6P20813 491 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 EDNRBP24530 442 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 KLRC1P26715 233 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 ICAM3P32942 547 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 GTF2A2P52657 109 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 VAV2P52735 878 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 NCKAP1LP55160 1127 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 NLRP11P59045 1033 aaKnown RBP3.73□□□□□ -1.81
LIG4-205ENST00000614526 STRN3Q13033 797 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 C1orf220Q5T0J3 134 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 SPRYD7Q5W111 196 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 SPOPLQ6IQ16 392 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 DPY19L2P1Q6NXN4 242 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 IRF2BP2Q7Z5L9 587 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 CCDC170Q8IYT3 715 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 KCTD17Q8N5Z5 321 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 MCPH1Q8NEM0 835 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 TAS1R2Q8TE23 839 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 DHX38Q92620 1227 aaKnown RBP3.73□□□□□ -1.81
LIG4-205ENST00000614526 SEMA4DQ92854 862 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 SECISBP2LQ93073 1101 aaKnown RBP3.73□□□□□ -1.81
LIG4-205ENST00000614526 TATDN2Q93075 761 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 ZIC5Q96T25 663 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 SENP7Q9BQF6 1050 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 INO80BQ9C086 356 aaPredicted RBP3.73□□□□□ -1.81
LIG4-205ENST00000614526 HAPLN2Q9GZV7 340 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 TMEM117Q9H0C3 514 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 MROH8Q9H579 483 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 L2HGDHQ9H9P8 463 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 RNF19AQ9NV58 838 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 PNMA3Q9UL41 463 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 MCM3APO60318 1980 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 DNAJC25-GNG10A0A024R161 153 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 LRRIQ3A6PVS8 624 aaPredicted RBP3.73□□□□□ -1.81
LIG4-205ENST00000614526 IBSPP21815 317 aaPredicted RBP3.73□□□□□ -1.81
LIG4-205ENST00000614526 CYP2C19P33261 490 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 GTF2F1P35269 517 aaKnown RBP eCLIP3.73□□□□□ -1.812e-26■■■■■ 105.6
LIG4-205ENST00000614526 TNFSF9P41273 254 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 MXI1P50539 228 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 CCNA1P78396 465 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 MAPK8IP2Q13387 824 aaPredicted RBP3.73□□□□□ -1.81
LIG4-205ENST00000614526 BIRC3Q13489 604 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 CAPSQ13938 189 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 TTLL4Q14679 1199 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 FAM160B1Q5W0V3 765 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 INTS8Q75QN2 995 aaKnown RBP3.73□□□□□ -1.81
LIG4-205ENST00000614526 GPR142Q7Z601 462 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 PALB2Q86YC2 1186 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 MAP4K3Q8IVH8 894 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 THNSL1Q8IYQ7 743 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 PDCL2Q8N4E4 241 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 RDM1Q8NG50 284 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 NPLOC4Q8TAT6 608 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 GOLGA5Q8TBA6 731 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 SLC20A1Q8WUM9 679 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 ERO1AQ96HE7 468 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 PLCB1Q9NQ66 1216 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 PDLIM7Q9NR12 457 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 TAS2R14Q9NYV8 317 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 EXOC7Q9UPT5 735 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 MRFAP1Q9Y605 127 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 IGSF9BQ9UPX0 1349 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 IGF2BP3O00425 579 aaKnown RBP eCLIP3.73□□□□□ -1.81
LIG4-205ENST00000614526 CYP26A1O43174 497 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 DYNC1LI2O43237 492 aaPredicted RBP3.73□□□□□ -1.81
LIG4-205ENST00000614526 B4GALT5O43286 388 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 ZMYND10O75800 440 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 ATG7O95352 703 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms