RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 CA8P35219 290 aa13.53□□□□□ -0.24
PDLIM2-218ENST00000614502 PBX3P40426 434 aa13.53□□□□□ -0.24
PDLIM2-218ENST00000614502 ZXDAP98168 799 aa13.53□□□□□ -0.24
PDLIM2-218ENST00000614502 CYP4A11Q02928 519 aa13.53□□□□□ -0.24
PDLIM2-218ENST00000614502 ITIH3Q06033 890 aa13.53□□□□□ -0.24
PDLIM2-218ENST00000614502 SPIRE1Q08AE8 756 aa13.53□□□□□ -0.24
PDLIM2-218ENST00000614502 CTTNQ14247 550 aaKnown RBP13.53□□□□□ -0.24
PDLIM2-218ENST00000614502 EARS2Q5JPH6 523 aaKnown RBP13.53□□□□□ -0.24
PDLIM2-218ENST00000614502 CES5AQ6NT32 575 aa13.53□□□□□ -0.24
PDLIM2-218ENST00000614502 MRPL10Q7Z7H8 261 aaKnown RBP13.53□□□□□ -0.24
PDLIM2-218ENST00000614502 DDX53Q86TM3 631 aaKnown RBP13.53□□□□□ -0.24
PDLIM2-218ENST00000614502 PPFIBP1Q86W92 1011 aa13.53□□□□□ -0.24
PDLIM2-218ENST00000614502 DIS3L2Q8IYB7 885 aaKnown RBP13.53□□□□□ -0.24
PDLIM2-218ENST00000614502 HACE1Q8IYU2 909 aa13.53□□□□□ -0.24
PDLIM2-218ENST00000614502 VPS52Q8N1B4 723 aa13.53□□□□□ -0.24
PDLIM2-218ENST00000614502 RNF149Q8NC42 400 aa13.53□□□□□ -0.24
PDLIM2-218ENST00000614502 SUSD6Q92537 303 aa13.53□□□□□ -0.24
PDLIM2-218ENST00000614502 TMEM143Q96AN5 459 aa13.53□□□□□ -0.24
PDLIM2-218ENST00000614502 CCDC51Q96ER9 411 aa13.53□□□□□ -0.24
PDLIM2-218ENST00000614502 NECTIN4Q96NY8 510 aa13.53□□□□□ -0.24
PDLIM2-218ENST00000614502 EIF2AK1Q9BQI3 630 aaKnown RBP13.53□□□□□ -0.24
PDLIM2-218ENST00000614502 APOL5Q9BWW9 433 aa13.53□□□□□ -0.24
PDLIM2-218ENST00000614502 TTC12Q9H892 705 aaPredicted RBP13.53□□□□□ -0.24
PDLIM2-218ENST00000614502 RSAD1Q9HA92 442 aa13.53□□□□□ -0.24
PDLIM2-218ENST00000614502 TBC1D13Q9NVG8 400 aa13.53□□□□□ -0.24
PDLIM2-218ENST00000614502 RGL1Q9NZL6 768 aa13.53□□□□□ -0.24
PDLIM2-218ENST00000614502 WRAP73Q9P2S5 460 aaPredicted RBP13.53□□□□□ -0.24
PDLIM2-218ENST00000614502 DAXXQ9UER7 740 aaPredicted RBP13.53□□□□□ -0.24
PDLIM2-218ENST00000614502 CDH22Q9UJ99 828 aa13.53□□□□□ -0.24
PDLIM2-218ENST00000614502 NR2E1Q9Y466 385 aa13.53□□□□□ -0.24
PDLIM2-218ENST00000614502 IRAK3Q9Y616 596 aa13.53□□□□□ -0.24
PDLIM2-218ENST00000614502 C2orf71A6NGG8 1288 aa13.52□□□□□ -0.25
PDLIM2-218ENST00000614502 HIDE1A8MVS5 230 aa13.52□□□□□ -0.25
PDLIM2-218ENST00000614502 BTBD18B2RXH4 712 aa13.52□□□□□ -0.25
PDLIM2-218ENST00000614502 NT5C1B-RDH14C9J2C7 533 aa13.52□□□□□ -0.25
PDLIM2-218ENST00000614502 CXCL14O95715 111 aa13.52□□□□□ -0.25
PDLIM2-218ENST00000614502 ALDH2P05091 517 aa13.52□□□□□ -0.25
PDLIM2-218ENST00000614502 GALTP07902 379 aa13.52□□□□□ -0.25
PDLIM2-218ENST00000614502 NCLP19338 710 aaKnown RBP13.52□□□□□ -0.25
PDLIM2-218ENST00000614502 SP100P23497 879 aaPredicted RBP13.52□□□□□ -0.25
PDLIM2-218ENST00000614502 ORC2Q13416 577 aaPredicted RBP13.52□□□□□ -0.25
PDLIM2-218ENST00000614502 NOTUMQ6P988 496 aa13.52□□□□□ -0.25
PDLIM2-218ENST00000614502 BMP8AQ7Z5Y6 402 aa13.52□□□□□ -0.25
PDLIM2-218ENST00000614502 LPPQ93052 612 aa13.52□□□□□ -0.25
PDLIM2-218ENST00000614502 PBXIP1Q96AQ6 731 aa13.52□□□□□ -0.25
PDLIM2-218ENST00000614502 IGSF21Q96ID5 467 aa13.52□□□□□ -0.25
PDLIM2-218ENST00000614502 HSD17B14Q9BPX1 270 aa13.52□□□□□ -0.25
PDLIM2-218ENST00000614502 TMEM175Q9BSA9 504 aa13.52□□□□□ -0.25
PDLIM2-218ENST00000614502 ZBP1Q9H171 429 aa13.52□□□□□ -0.25
PDLIM2-218ENST00000614502 S1PR5Q9H228 398 aa13.52□□□□□ -0.25
PDLIM2-218ENST00000614502 NRDE2Q9H7Z3 1164 aa13.52□□□□□ -0.25
PDLIM2-218ENST00000614502 DZANK1Q9NVP4 752 aa13.52□□□□□ -0.25
PDLIM2-218ENST00000614502 INPP5FQ9Y2H2 1132 aa13.52□□□□□ -0.25
PDLIM2-218ENST00000614502 HCFC2Q9Y5Z7 792 aa13.52□□□□□ -0.25
PDLIM2-218ENST00000614502 LARGE1O95461 756 aa13.51□□□□□ -0.25
PDLIM2-218ENST00000614502 CTSAP10619 480 aa13.51□□□□□ -0.25
PDLIM2-218ENST00000614502 TXKP42681 527 aa13.51□□□□□ -0.25
PDLIM2-218ENST00000614502 MTHFRP42898 656 aa13.51□□□□□ -0.25
PDLIM2-218ENST00000614502 PTENP60484 403 aa13.51□□□□□ -0.25
PDLIM2-218ENST00000614502 LLGL2Q6P1M3 1020 aa13.51□□□□□ -0.25
PDLIM2-218ENST00000614502 SYCE2Q6PIF2 218 aa13.51□□□□□ -0.25
PDLIM2-218ENST00000614502 IFNLR1Q8IU57 520 aaPredicted RBP13.51□□□□□ -0.25
PDLIM2-218ENST00000614502 ZNF579Q8NAF0 562 aaKnown RBP13.51□□□□□ -0.25
PDLIM2-218ENST00000614502 RIPOR3Q96MK2 946 aa13.51□□□□□ -0.25
PDLIM2-218ENST00000614502 LLPHQ9BRT6 129 aaKnown RBP13.51□□□□□ -0.25
PDLIM2-218ENST00000614502 NFKBIZQ9BYH8 718 aa13.51□□□□□ -0.25
PDLIM2-218ENST00000614502 BACH2Q9BYV9 841 aa13.51□□□□□ -0.25
PDLIM2-218ENST00000614502 GBP3Q9H0R5 595 aa13.51□□□□□ -0.25
PDLIM2-218ENST00000614502 UPF2Q9HAU5 1272 aaKnown RBP13.51□□□□□ -0.25
PDLIM2-218ENST00000614502 LIMCH1Q9UPQ0 1083 aa13.51□□□□□ -0.25
PDLIM2-218ENST00000614502 SSX2IPQ9Y2D8 614 aa13.51□□□□□ -0.25
PDLIM2-218ENST00000614502 FAN1Q9Y2M0 1017 aa13.51□□□□□ -0.25
PDLIM2-218ENST00000614502 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.5□□□□□ -0.25
PDLIM2-218ENST00000614502 FAM205CA6NFA0 338 aa13.5□□□□□ -0.25
PDLIM2-218ENST00000614502 CLASP2O75122 1294 aaKnown RBP13.5□□□□□ -0.25
PDLIM2-218ENST00000614502 NR1I2O75469 434 aa13.5□□□□□ -0.25
PDLIM2-218ENST00000614502 ITGA4P13612 1032 aa13.5□□□□□ -0.25
PDLIM2-218ENST00000614502 HOXA11P31270 313 aaPredicted RBP13.5□□□□□ -0.25
PDLIM2-218ENST00000614502 VCPP55072 806 aaKnown RBP13.5□□□□□ -0.25
PDLIM2-218ENST00000614502 HMGN5P82970 282 aaKnown RBP13.5□□□□□ -0.25
PDLIM2-218ENST00000614502 TCF15Q12870 199 aa13.5□□□□□ -0.25
PDLIM2-218ENST00000614502 LONRF3Q496Y0 759 aa13.5□□□□□ -0.25
PDLIM2-218ENST00000614502 AGMOQ6ZNB7 445 aa13.5□□□□□ -0.25
PDLIM2-218ENST00000614502 ERMNQ8TAM6 284 aa13.5□□□□□ -0.25
PDLIM2-218ENST00000614502 ASIC4Q96FT7 647 aa13.5□□□□□ -0.25
PDLIM2-218ENST00000614502 ZSCAN31Q96LW9 406 aaPredicted RBP13.5□□□□□ -0.25
PDLIM2-218ENST00000614502 MTMR9Q96QG7 549 aa13.5□□□□□ -0.25
PDLIM2-218ENST00000614502 EMILIN2Q9BXX0 1053 aa13.5□□□□□ -0.25
PDLIM2-218ENST00000614502 TRIM6Q9C030 488 aaPredicted RBP13.5□□□□□ -0.25
PDLIM2-218ENST00000614502 ADAM7Q9H2U9 754 aa13.5□□□□□ -0.25
PDLIM2-218ENST00000614502 MINDY3Q9H8M7 445 aa13.5□□□□□ -0.25
PDLIM2-218ENST00000614502 TUFT1Q9NNX1 390 aa13.5□□□□□ -0.25
PDLIM2-218ENST00000614502 BMP2KQ9NSY1 1161 aaPredicted RBP13.5□□□□□ -0.25
PDLIM2-218ENST00000614502 CFAP54Q96N23 3096 aa13.5□□□□□ -0.25
PDLIM2-218ENST00000614502 INO80B-WBP1J3KQ70 363 aa13.49□□□□□ -0.25
PDLIM2-218ENST00000614502 ARL2P36404 184 aa13.49□□□□□ -0.25
PDLIM2-218ENST00000614502 RARRES1P49788 294 aa13.49□□□□□ -0.25
PDLIM2-218ENST00000614502 ELMSAN1Q6PJG2 1045 aa13.49□□□□□ -0.25
PDLIM2-218ENST00000614502 MCPH1Q8NEM0 835 aa13.49□□□□□ -0.25
PDLIM2-218ENST00000614502 C8orf76Q96K31 380 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms