RNA–Protein interactions for RNA: ENST00000614293.4

ABCA2-223, Transcript of ATP binding cassette subfamily A member 2, human

TSL 5 BASIC

Gene ABCA2, Length 8,146 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-223	ENST00000614293	GPIHBP1	Q8IV16	184 aa		12.92	□□□□□ -0.34
ABCA2-223	ENST00000614293	TUBGCP2	Q9BSJ2	902 aa		12.92	□□□□□ -0.34
ABCA2-223	ENST00000614293	SMARCAL1	Q9NZC9	954 aa		12.92	□□□□□ -0.34
ABCA2-223	ENST00000614293	FBXL21	Q9UKT6	434 aa		12.92	□□□□□ -0.34
ABCA2-223	ENST00000614293	FAM50B	Q9Y247	325 aa		12.92	□□□□□ -0.34
ABCA2-223	ENST00000614293	QRICH2	Q9H0J4	1663 aa		12.92	□□□□□ -0.34
ABCA2-223	ENST00000614293	MAPK13	O15264	365 aa		12.92	□□□□□ -0.34
ABCA2-223	ENST00000614293	CCT5	P48643	541 aa		12.92	□□□□□ -0.34
ABCA2-223	ENST00000614293	TNIP2	Q8NFZ5	429 aa		12.92	□□□□□ -0.34
ABCA2-223	ENST00000614293	TMC2	Q8TDI7	906 aa		12.92	□□□□□ -0.34
ABCA2-223	ENST00000614293	SUCLG2	Q96I99	432 aa		12.92	□□□□□ -0.34
ABCA2-223	ENST00000614293	PGRMC1	O00264	195 aa	Known RBP	12.92	□□□□□ -0.34
ABCA2-223	ENST00000614293	DFFA	O00273	331 aa		12.92	□□□□□ -0.34
ABCA2-223	ENST00000614293	MRPS15	P82914	257 aa	Known RBP	12.92	□□□□□ -0.34
ABCA2-223	ENST00000614293	MAN2A1	Q16706	1144 aa		12.92	□□□□□ -0.34
ABCA2-223	ENST00000614293	CYP4F22	Q6NT55	531 aa		12.92	□□□□□ -0.34
ABCA2-223	ENST00000614293	RASSF3	Q86WH2	238 aa		12.92	□□□□□ -0.34
ABCA2-223	ENST00000614293	DDX42	Q86XP3	938 aa	Known RBP eCLIP	12.92	□□□□□ -0.34
ABCA2-223	ENST00000614293	STAM	Q92783	540 aa		12.92	□□□□□ -0.34
ABCA2-223	ENST00000614293	DMAP1	Q9NPF5	467 aa	Predicted RBP	12.92	□□□□□ -0.34
ABCA2-223	ENST00000614293	APOBEC2	Q9Y235	224 aa	Known RBP	12.92	□□□□□ -0.34
ABCA2-223	ENST00000614293	PRG3	Q9Y2Y8	225 aa	Predicted RBP	12.92	□□□□□ -0.34
ABCA2-223	ENST00000614293	STAG3L1	P0CL83	205 aa		12.92	□□□□□ -0.34
ABCA2-223	ENST00000614293	SNAPC2	Q13487	334 aa		12.92	□□□□□ -0.34
ABCA2-223	ENST00000614293	IQGAP3	Q86VI3	1631 aa		12.92	□□□□□ -0.34
ABCA2-223	ENST00000614293	KIAA0232	Q92628	1395 aa		12.92	□□□□□ -0.34
ABCA2-223	ENST00000614293	PLEKHG2	Q9H7P9	1386 aa		12.92	□□□□□ -0.34
ABCA2-223	ENST00000614293	NME3	Q13232	169 aa		12.92	□□□□□ -0.34
ABCA2-223	ENST00000614293	HEATR6	Q6AI08	1181 aa	Known RBP	12.92	□□□□□ -0.34
ABCA2-223	ENST00000614293	TLR2	O60603	784 aa		12.92	□□□□□ -0.34
ABCA2-223	ENST00000614293	CDH2	P19022	906 aa	Predicted RBP	12.92	□□□□□ -0.34
ABCA2-223	ENST00000614293	MAPRE2	Q15555	327 aa		12.92	□□□□□ -0.34
ABCA2-223	ENST00000614293	ARHGAP18	Q8N392	663 aa		12.92	□□□□□ -0.34
ABCA2-223	ENST00000614293	SYMPK	Q92797	1274 aa	Known RBP	12.92	□□□□□ -0.34
ABCA2-223	ENST00000614293	RNF26	Q9BY78	433 aa	Predicted RBP	12.92	□□□□□ -0.34
ABCA2-223	ENST00000614293	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	12.92	□□□□□ -0.34
ABCA2-223	ENST00000614293	USP17L10	C9JJH3	530 aa		12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	CAND2	O75155	1236 aa		12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	CIAO1	O76071	339 aa		12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	SPDYA	Q5MJ70	313 aa		12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	SPATA1	Q5VX52	437 aa		12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	KAT6A	Q92794	2004 aa		12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	MLN	P12872	115 aa		12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	AP3M2	P53677	418 aa		12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	EHHADH	Q08426	723 aa		12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	BRIP1	Q9BX63	1249 aa		12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	HDAC6	Q9UBN7	1215 aa		12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	RNF14	Q9UBS8	474 aa		12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	SERPING1	P05155	500 aa		12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	LIG3	P49916	1009 aa		12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	AP3B2	Q13367	1082 aa		12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	VMP1	Q96GC9	406 aa		12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	EIF2AK2	P19525	551 aa	Known RBP	12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	CPT1A	P50416	773 aa		12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	CAV1	Q03135	178 aa		12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	BATF3	Q9NR55	127 aa		12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	KIAA1468	Q9P260	1216 aa		12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	EIF2S1	P05198	315 aa	Known RBP	12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	DMC1	Q14565	340 aa		12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	UBE3C	Q15386	1083 aa		12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	BRINP3	Q76B58	766 aa		12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	TMEM35B	Q8NCS4	154 aa		12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	TRIM8	Q9BZR9	551 aa		12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	CEP152	O94986	1710 aa		12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	CARS	P49589	748 aa	Known RBP	12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	ARL4C	P56559	192 aa		12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	KRT76	Q01546	638 aa		12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	ORAI2	Q96SN7	254 aa		12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	PODXL	O00592	558 aa		12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	GADD45B	O75293	160 aa	Predicted RBP	12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	HARS2	P49590	506 aa	Known RBP	12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	PEX3	P56589	373 aa		12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	MDM2	Q00987	491 aa	Predicted RBP	12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	PTPA	Q15257	358 aa		12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	SNRNP48	Q6IEG0	339 aa	Known RBP	12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	SRL	Q86TD4	932 aa		12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	RHOT2	Q8IXI1	618 aa		12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	DDX17	Q92841	729 aa	Known RBP	12.91	□□□□□ -0.34
ABCA2-223	ENST00000614293	DDHD2	O94830	711 aa		12.9	□□□□□ -0.34
ABCA2-223	ENST00000614293	RGS4	P49798	205 aa		12.9	□□□□□ -0.34
ABCA2-223	ENST00000614293	NEK2	P51955	445 aa		12.9	□□□□□ -0.34
ABCA2-223	ENST00000614293	TCP11X2	Q5H9J9	407 aa		12.9	□□□□□ -0.34
ABCA2-223	ENST00000614293	OR6P1	Q8NGX9	317 aa		12.9	□□□□□ -0.34
ABCA2-223	ENST00000614293	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	12.9	□□□□□ -0.34
ABCA2-223	ENST00000614293	H2AFY	O75367	372 aa	Known RBP	12.9	□□□□□ -0.34
ABCA2-223	ENST00000614293	ZNF544	Q6NX49	715 aa		12.9	□□□□□ -0.34
ABCA2-223	ENST00000614293	TRIM72	Q6ZMU5	477 aa		12.9	□□□□□ -0.34
ABCA2-223	ENST00000614293	TSPAN17	Q96FV3	270 aa		12.9	□□□□□ -0.34
ABCA2-223	ENST00000614293	MRGBP	Q9NV56	204 aa		12.9	□□□□□ -0.34
ABCA2-223	ENST00000614293	PDE8B	O95263	885 aa		12.9	□□□□□ -0.34
ABCA2-223	ENST00000614293	ESRRA	P11474	423 aa	Predicted RBP	12.9	□□□□□ -0.34
ABCA2-223	ENST00000614293	HIRA	P54198	1017 aa	Predicted RBP	12.9	□□□□□ -0.34
ABCA2-223	ENST00000614293	MTFR1	Q15390	333 aa		12.9	□□□□□ -0.34
ABCA2-223	ENST00000614293	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	12.9	□□□□□ -0.34
ABCA2-223	ENST00000614293	CLYBL	Q8N0X4	340 aa		12.9	□□□□□ -0.34
ABCA2-223	ENST00000614293	ANKRD49	Q8WVL7	239 aa		12.9	□□□□□ -0.34
ABCA2-223	ENST00000614293	RAPGEF5	Q92565	580 aa		12.9	□□□□□ -0.34
ABCA2-223	ENST00000614293	NRBP1	Q9UHY1	535 aa		12.9	□□□□□ -0.34
ABCA2-223	ENST00000614293	SYNGAP1	Q96PV0	1343 aa		12.9	□□□□□ -0.34
ABCA2-223	ENST00000614293	SYNCRIP	O60506	623 aa	Known RBP	12.9	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms