RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 TMEM134Q9H6X4 195 aa18.32■□□□□ 0.52
IRF1-211ENST00000613424 ARHGAP28Q9P2N2 729 aa18.32■□□□□ 0.52
IRF1-211ENST00000613424 SERTAD1Q9UHV2 236 aa18.32■□□□□ 0.52
IRF1-211ENST00000613424 LRFN2Q9ULH4 789 aa18.32■□□□□ 0.52
IRF1-211ENST00000613424 INSL6Q9Y581 213 aa18.32■□□□□ 0.52
IRF1-211ENST00000613424 GBF1Q92538 1859 aa18.31■□□□□ 0.52
IRF1-211ENST00000613424 TTLL13PA6NNM8 815 aa18.31■□□□□ 0.52
IRF1-211ENST00000613424 ACKR2O00590 384 aa18.31■□□□□ 0.52
IRF1-211ENST00000613424 TBCAO75347 108 aaKnown RBP18.31■□□□□ 0.52
IRF1-211ENST00000613424 AMPD3Q01432 767 aa18.31■□□□□ 0.52
IRF1-211ENST00000613424 LONRF3Q496Y0 759 aa18.31■□□□□ 0.52
IRF1-211ENST00000613424 ECHDC2Q86YB7 292 aa18.31■□□□□ 0.52
IRF1-211ENST00000613424 TMEM161BQ8NDZ6 487 aa18.31■□□□□ 0.52
IRF1-211ENST00000613424 MRPS27Q92552 414 aaKnown RBP18.31■□□□□ 0.52
IRF1-211ENST00000613424 TIFAQ96CG3 184 aa18.31■□□□□ 0.52
IRF1-211ENST00000613424 LRRC27Q9C0I9 530 aa18.31■□□□□ 0.52
IRF1-211ENST00000613424 NKX2-4Q9H2Z4 354 aa18.31■□□□□ 0.52
IRF1-211ENST00000613424 GOLPH3LQ9H4A5 285 aa18.31■□□□□ 0.52
IRF1-211ENST00000613424 ELAC1Q9H777 363 aaKnown RBP18.31■□□□□ 0.52
IRF1-211ENST00000613424 RNF216Q9NWF9 866 aaPredicted RBP18.31■□□□□ 0.52
IRF1-211ENST00000613424 TMEM161AQ9NX61 479 aa18.31■□□□□ 0.52
IRF1-211ENST00000613424 USP20Q9Y2K6 914 aa18.31■□□□□ 0.52
IRF1-211ENST00000613424 A0A1B0GUA9 196 aa18.3■□□□□ 0.52
IRF1-211ENST00000613424 LCHNA4D1U4 455 aa18.3■□□□□ 0.52
IRF1-211ENST00000613424 GOLGA6L4A6NEF3 574 aa18.3■□□□□ 0.52
IRF1-211ENST00000613424 ACTN4O43707 911 aaKnown RBP18.3■□□□□ 0.52
IRF1-211ENST00000613424 TRAK2O60296 914 aa18.3■□□□□ 0.52
IRF1-211ENST00000613424 DGKIO75912 1065 aa18.3■□□□□ 0.52
IRF1-211ENST00000613424 EDN1P05305 212 aa18.3■□□□□ 0.52
IRF1-211ENST00000613424 SLFN14P0C7P3 912 aa18.3■□□□□ 0.52
IRF1-211ENST00000613424 SYKP43405 635 aa18.3■□□□□ 0.52
IRF1-211ENST00000613424 NCKAP1LP55160 1127 aa18.3■□□□□ 0.52
IRF1-211ENST00000613424 PRPF4BQ13523 1007 aaKnown RBP18.3■□□□□ 0.52
IRF1-211ENST00000613424 UBXN11Q5T124 520 aa18.3■□□□□ 0.52
IRF1-211ENST00000613424 NOTUMQ6P988 496 aa18.3■□□□□ 0.52
IRF1-211ENST00000613424 TAS1R3Q7RTX0 852 aa18.3■□□□□ 0.52
IRF1-211ENST00000613424 CEP57L1Q8IYX8 460 aa18.3■□□□□ 0.52
IRF1-211ENST00000613424 ZNF689Q96CS4 500 aaPredicted RBP18.3■□□□□ 0.52
IRF1-211ENST00000613424 YME1L1Q96TA2 773 aa18.3■□□□□ 0.52
IRF1-211ENST00000613424 MAGEF1Q9HAY2 307 aa18.3■□□□□ 0.52
IRF1-211ENST00000613424 FAM105AQ9NUU6 356 aa18.3■□□□□ 0.52
IRF1-211ENST00000613424 ZNF623O75123 536 aa18.29■□□□□ 0.52
IRF1-211ENST00000613424 EOMESO95936 686 aa18.29■□□□□ 0.52
IRF1-211ENST00000613424 CA3P07451 260 aa18.29■□□□□ 0.52
IRF1-211ENST00000613424 MAPTP10636 758 aaKnown RBP18.29■□□□□ 0.52
IRF1-211ENST00000613424 SKIP12755 728 aa18.29■□□□□ 0.52
IRF1-211ENST00000613424 CSPP1Q1MSJ5 1256 aa18.29■□□□□ 0.52
IRF1-211ENST00000613424 NT5DC1Q5TFE4 455 aa18.29■□□□□ 0.52
IRF1-211ENST00000613424 GPR153Q6NV75 609 aa18.29■□□□□ 0.52
IRF1-211ENST00000613424 HAUS6Q7Z4H7 955 aa18.29■□□□□ 0.52
IRF1-211ENST00000613424 ZNF598Q86UK7 904 aaKnown RBP18.29■□□□□ 0.52
IRF1-211ENST00000613424 CDR2LQ86X02 465 aaPredicted RBP18.29■□□□□ 0.52
IRF1-211ENST00000613424 CCDC51Q96ER9 411 aa18.29■□□□□ 0.52
IRF1-211ENST00000613424 FIZ1Q96SL8 496 aa18.29■□□□□ 0.52
IRF1-211ENST00000613424 C7orf25Q9BPX7 421 aa18.29■□□□□ 0.52
IRF1-211ENST00000613424 EIF2AQ9BY44 585 aaKnown RBP18.29■□□□□ 0.52
IRF1-211ENST00000613424 TRIM9Q9C026 710 aa18.29■□□□□ 0.52
IRF1-211ENST00000613424 USP25Q9UHP3 1055 aa18.29■□□□□ 0.52
IRF1-211ENST00000613424 PCDHB2Q9Y5E7 798 aa18.29■□□□□ 0.52
IRF1-211ENST00000613424 PHLPP2Q6ZVD8 1323 aa18.28■□□□□ 0.52
IRF1-211ENST00000613424 CNTNAP2Q9UHC6 1331 aa18.28■□□□□ 0.52
IRF1-211ENST00000613424 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.28■□□□□ 0.52
IRF1-211ENST00000613424 FRMD3A2A2Y4 597 aa18.28■□□□□ 0.52
IRF1-211ENST00000613424 ARHGEF15O94989 841 aa18.28■□□□□ 0.52
IRF1-211ENST00000613424 IDEP14735 1019 aa18.28■□□□□ 0.52
IRF1-211ENST00000613424 ATF7P17544 494 aaPredicted RBP18.28■□□□□ 0.52
IRF1-211ENST00000613424 AFMP43652 599 aa18.28■□□□□ 0.52
IRF1-211ENST00000613424 GATMP50440 423 aa18.28■□□□□ 0.52
IRF1-211ENST00000613424 RAB27AP51159 221 aa18.28■□□□□ 0.52
IRF1-211ENST00000613424 TMEM132AQ24JP5 1023 aa18.28■□□□□ 0.52
IRF1-211ENST00000613424 CNNM4Q6P4Q7 775 aa18.28■□□□□ 0.52
IRF1-211ENST00000613424 SFR1Q86XK3 245 aa18.28■□□□□ 0.52
IRF1-211ENST00000613424 FAM178BQ8IXR5 827 aa18.28■□□□□ 0.52
IRF1-211ENST00000613424 GRAMD1CQ8IYS0 662 aa18.28■□□□□ 0.52
IRF1-211ENST00000613424 RNF169Q8NCN4 708 aa18.28■□□□□ 0.52
IRF1-211ENST00000613424 SP7Q8TDD2 431 aaPredicted RBP18.28■□□□□ 0.52
IRF1-211ENST00000613424 PAGE5Q96GU1 130 aa18.28■□□□□ 0.52
IRF1-211ENST00000613424 SLC28A3Q9HAS3 691 aa18.28■□□□□ 0.52
IRF1-211ENST00000613424 RC3H2Q9HBD1 1191 aaKnown RBP18.28■□□□□ 0.52
IRF1-211ENST00000613424 PANK4Q9NVE7 773 aa18.28■□□□□ 0.52
IRF1-211ENST00000613424 H0YCG3 227 aa18.27■□□□□ 0.52
IRF1-211ENST00000613424 ZNF202O95125 648 aa18.27■□□□□ 0.52
IRF1-211ENST00000613424 FGFR1P11362 822 aa18.27■□□□□ 0.52
IRF1-211ENST00000613424 GAP43P17677 238 aa18.27■□□□□ 0.52
IRF1-211ENST00000613424 CASP1P29466 404 aa18.27■□□□□ 0.52
IRF1-211ENST00000613424 NMT1P30419 496 aaKnown RBP18.27■□□□□ 0.52
IRF1-211ENST00000613424 HERC4Q5GLZ8 1057 aaPredicted RBP18.27■□□□□ 0.52
IRF1-211ENST00000613424 SLC27A1Q6PCB7 646 aa18.27■□□□□ 0.52
IRF1-211ENST00000613424 ZNF720Q7Z2F6 126 aa18.27■□□□□ 0.52
IRF1-211ENST00000613424 MRPL10Q7Z7H8 261 aaKnown RBP18.27■□□□□ 0.52
IRF1-211ENST00000613424 KCNN1Q92952 543 aa18.27■□□□□ 0.52
IRF1-211ENST00000613424 ACO2Q99798 780 aaKnown RBP18.27■□□□□ 0.52
IRF1-211ENST00000613424 BLZF1Q9H2G9 400 aa18.27■□□□□ 0.52
IRF1-211ENST00000613424 TTYH1Q9H313 450 aaPredicted RBP18.27■□□□□ 0.52
IRF1-211ENST00000613424 PDZD7Q9H5P4 517 aa18.27■□□□□ 0.52
IRF1-211ENST00000613424 RNF19AQ9NV58 838 aa18.27■□□□□ 0.52
IRF1-211ENST00000613424 SEL1LQ9UBV2 794 aa18.27■□□□□ 0.52
IRF1-211ENST00000613424 LINC01553A4QN01 128 aa18.26■□□□□ 0.51
IRF1-211ENST00000613424 K7ENM7 598 aa18.26■□□□□ 0.51
IRF1-211ENST00000613424 N4BP3O15049 544 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms