RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 HMG20AQ9NP66 347 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 DCCP43146 1447 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 CENPXA8MT69 81 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 ASMTLO95671 621 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 ORC2Q13416 577 aaPredicted RBP5.25□□□□□ -1.57
VPS13D-213ENST00000613099 SF3B3Q15393 1217 aaKnown RBP5.25□□□□□ -1.57
VPS13D-213ENST00000613099 KCTD21Q4G0X4 260 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.25□□□□□ -1.57
VPS13D-213ENST00000613099 TRIM64A6NGJ6 449 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 TRIM64BA6NI03 449 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 EIF4A3P38919 411 aaKnown RBP5.25□□□□□ -1.57
VPS13D-213ENST00000613099 THOC5Q13769 683 aaKnown RBP5.25□□□□□ -1.57
VPS13D-213ENST00000613099 BBS9Q3SYG4 887 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 ADSSL1Q8N142 457 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.25□□□□□ -1.57
VPS13D-213ENST00000613099 OTUD7AQ8TE49 926 aaPredicted RBP5.25□□□□□ -1.57
VPS13D-213ENST00000613099 DHRS1Q96LJ7 313 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 MLPHQ9BV36 600 aaPredicted RBP5.25□□□□□ -1.57
VPS13D-213ENST00000613099 OSBPL8Q9BZF1 889 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 PCSK1NQ9UHG2 260 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 PREX1Q8TCU6 1659 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 STIP1P31948 543 aaKnown RBP5.25□□□□□ -1.57
VPS13D-213ENST00000613099 UBN1Q9NPG3 1134 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 SAC3D1A6NKF1 404 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 CHEK2O96017 543 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 EIF4BP23588 611 aaKnown RBP5.25□□□□□ -1.57
VPS13D-213ENST00000613099 ZC2HC1CQ53FD0 456 aaPredicted RBP5.25□□□□□ -1.57
VPS13D-213ENST00000613099 C16orf89Q6UX73 402 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 ANKLE2Q86XL3 938 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 KLHL31Q9H511 634 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 MAN1B1Q9UKM7 699 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 SAGE2PA6NJ88 616 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 POLR2FP61218 127 aaKnown RBP5.25□□□□□ -1.57
VPS13D-213ENST00000613099 ZNF618Q5T7W0 954 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 TMEM53Q6P2H8 277 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 UNC45BQ8IWX7 931 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 ARL8AQ96BM9 186 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 APOL4Q9BPW4 351 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 CHID1Q9BWS9 393 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 GGNBP2Q9H3C7 697 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 COQ6Q9Y2Z9 468 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 MTSS1O43312 755 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 ENO2P09104 434 aaPredicted RBP5.25□□□□□ -1.57
VPS13D-213ENST00000613099 NAT1P18440 290 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 ERICH1Q86X53 443 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 CALM1P0DP23 149 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 CALM2P0DP24 149 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 CALM3P0DP25 149 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 SYDE1Q6ZW31 735 aaPredicted RBP5.25□□□□□ -1.57
VPS13D-213ENST00000613099 KRT28Q7Z3Y7 464 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 CATSPER3Q86XQ3 398 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 ALKBH8Q96BT7 664 aaKnown RBP5.25□□□□□ -1.57
VPS13D-213ENST00000613099 MRRFQ96E11 262 aaKnown RBP5.25□□□□□ -1.57
VPS13D-213ENST00000613099 EBF2Q9HAK2 575 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 IZUMO2Q6UXV1 221 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 TCEANC2Q96MN5 208 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 SLC12A5Q9H2X9 1139 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 DTNAQ9Y4J8 743 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 B2RBV5 119 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 VAMP4O75379 141 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 PLS3P13797 630 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 OCRLQ01968 901 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 STK32CQ86UX6 486 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 TTC5Q8N0Z6 440 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 SPATA5Q8NB90 893 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 AENQ8WTP8 325 aaKnown RBP5.24□□□□□ -1.57
VPS13D-213ENST00000613099 DHX36Q9H2U1 1008 aaKnown RBP5.24□□□□□ -1.57
VPS13D-213ENST00000613099 SUGCTQ9HAC7 445 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 CYLDQ9NQC7 956 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 BUB1O43683 1085 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 JAK2O60674 1132 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 TJP3O95049 919 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 PSMC3P17980 439 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 RSBN1Q5VWQ0 802 aaPredicted RBP5.24□□□□□ -1.57
VPS13D-213ENST00000613099 GALNT17Q6IS24 598 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 SRRM1Q8IYB3 904 aaKnown RBP5.24□□□□□ -1.57
VPS13D-213ENST00000613099 GSPT2Q8IYD1 628 aaKnown RBP5.24□□□□□ -1.57
VPS13D-213ENST00000613099 WDR12Q9GZL7 423 aaKnown RBP5.24□□□□□ -1.57
VPS13D-213ENST00000613099 SETBP1Q9Y6X0 1596 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 UBOX5O94941 541 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 RPN1P04843 607 aaKnown RBP5.24□□□□□ -1.57
VPS13D-213ENST00000613099 GALK1P51570 392 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 BTKQ06187 659 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 PARP6Q2NL67 630 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 HEATR4Q86WZ0 1026 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 CCDC127Q96BQ5 260 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 ACSBG1Q96GR2 724 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 MAGEB18Q96M61 343 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 MMS19Q96T76 1030 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 ARPC5LQ9BPX5 153 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 TRIM8Q9BZR9 551 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 CCDC61Q9Y6R9 512 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 WBP4O75554 376 aaKnown RBP5.24□□□□□ -1.57
VPS13D-213ENST00000613099 LDHBP07195 334 aaKnown RBP5.24□□□□□ -1.57
VPS13D-213ENST00000613099 INHBAP08476 426 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 CA4P22748 312 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 USP46P62068 366 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 ZNF579Q8NAF0 562 aaKnown RBP5.24□□□□□ -1.57
VPS13D-213ENST00000613099 GDPD5Q8WTR4 605 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 ISCUQ9H1K1 167 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms