RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 NXPE3Q969Y0 559 aa19.33■□□□□ 0.68
CSNK1E-215ENST00000612795 RIT2Q99578 217 aa19.33■□□□□ 0.68
CSNK1E-215ENST00000612795 SH2D3AQ9BRG2 576 aa19.33■□□□□ 0.68
CSNK1E-215ENST00000612795 UNC45AQ9H3U1 944 aa19.33■□□□□ 0.68
CSNK1E-215ENST00000612795 RSAD1Q9HA92 442 aa19.33■□□□□ 0.68
CSNK1E-215ENST00000612795 ARHGEF3Q9NR81 526 aa19.33■□□□□ 0.68
CSNK1E-215ENST00000612795 SUCLA2Q9P2R7 463 aaPredicted RBP19.33■□□□□ 0.68
CSNK1E-215ENST00000612795 EPS15L1Q9UBC2 864 aa19.33■□□□□ 0.68
CSNK1E-215ENST00000612795 PCDHB2Q9Y5E7 798 aa19.33■□□□□ 0.68
CSNK1E-215ENST00000612795 CACNA1IQ9P0X4 2223 aa19.33■□□□□ 0.68
CSNK1E-215ENST00000612795 TMEM150BA6NC51 233 aa19.32■□□□□ 0.68
CSNK1E-215ENST00000612795 LILRB3O75022 631 aa19.32■□□□□ 0.68
CSNK1E-215ENST00000612795 MYBP10242 640 aa19.32■□□□□ 0.68
CSNK1E-215ENST00000612795 XKR3Q5GH77 459 aa19.32■□□□□ 0.68
CSNK1E-215ENST00000612795 DHX32Q7L7V1 743 aaKnown RBP19.32■□□□□ 0.68
CSNK1E-215ENST00000612795 BICD2Q8TD16 824 aa19.32■□□□□ 0.68
CSNK1E-215ENST00000612795 CCDC136Q96JN2 1154 aa19.32■□□□□ 0.68
CSNK1E-215ENST00000612795 RPS6KC1Q96S38 1066 aa19.32■□□□□ 0.68
CSNK1E-215ENST00000612795 MYADMQ96S97 322 aa19.32■□□□□ 0.68
CSNK1E-215ENST00000612795 HERC2P3Q9BVR0 1158 aa19.32■□□□□ 0.68
CSNK1E-215ENST00000612795 NIFKQ9BYG3 293 aaKnown RBP19.32■□□□□ 0.68
CSNK1E-215ENST00000612795 PIDD1Q9HB75 910 aa19.32■□□□□ 0.68
CSNK1E-215ENST00000612795 FAM217BQ9NTX9 383 aaPredicted RBP19.32■□□□□ 0.68
CSNK1E-215ENST00000612795 KANSL3Q9P2N6 904 aa19.32■□□□□ 0.68
CSNK1E-215ENST00000612795 SIT1Q9Y3P8 196 aa19.32■□□□□ 0.68
CSNK1E-215ENST00000612795 CNTNAP2Q9UHC6 1331 aa19.31■□□□□ 0.68
CSNK1E-215ENST00000612795 ARID2Q68CP9 1835 aa19.31■□□□□ 0.68
CSNK1E-215ENST00000612795 CCDC196A0A1B0GTZ2 297 aa19.31■□□□□ 0.68
CSNK1E-215ENST00000612795 NRP1O14786 923 aa19.31■□□□□ 0.68
CSNK1E-215ENST00000612795 POMCP01189 267 aa19.31■□□□□ 0.68
CSNK1E-215ENST00000612795 SP9P0CG40 484 aa19.31■□□□□ 0.68
CSNK1E-215ENST00000612795 RCAN1P53805 252 aa19.31■□□□□ 0.68
CSNK1E-215ENST00000612795 FGD1P98174 961 aa19.31■□□□□ 0.68
CSNK1E-215ENST00000612795 PHLDB3Q6NSJ2 640 aa19.31■□□□□ 0.68
CSNK1E-215ENST00000612795 AGMOQ6ZNB7 445 aa19.31■□□□□ 0.68
CSNK1E-215ENST00000612795 GET4Q7L5D6 327 aaPredicted RBP19.31■□□□□ 0.68
CSNK1E-215ENST00000612795 KSR1Q8IVT5 923 aa19.31■□□□□ 0.68
CSNK1E-215ENST00000612795 RDM1Q8NG50 284 aa19.31■□□□□ 0.68
CSNK1E-215ENST00000612795 SLC5A5Q92911 643 aa19.31■□□□□ 0.68
CSNK1E-215ENST00000612795 RHOBTB2Q9BYZ6 727 aa19.31■□□□□ 0.68
CSNK1E-215ENST00000612795 AGPAT5Q9NUQ2 364 aa19.31■□□□□ 0.68
CSNK1E-215ENST00000612795 PRG3Q9Y2Y8 225 aaPredicted RBP19.31■□□□□ 0.68
CSNK1E-215ENST00000612795 IGKV6-21A0A0C4DH24 114 aa19.3■□□□□ 0.68
CSNK1E-215ENST00000612795 TEX28O15482 410 aa19.3■□□□□ 0.68
CSNK1E-215ENST00000612795 RFPL2O75678 378 aa19.3■□□□□ 0.68
CSNK1E-215ENST00000612795 ADD1P35611 737 aaKnown RBP19.3■□□□□ 0.68
CSNK1E-215ENST00000612795 GLUD2P49448 558 aa19.3■□□□□ 0.68
CSNK1E-215ENST00000612795 EXOSC10Q01780 885 aaKnown RBP19.3■□□□□ 0.68
CSNK1E-215ENST00000612795 C1orf210Q8IVY1 113 aa19.3■□□□□ 0.68
CSNK1E-215ENST00000612795 CCDC148Q8NFR7 591 aa19.3■□□□□ 0.68
CSNK1E-215ENST00000612795 GJA10Q969M2 543 aa19.3■□□□□ 0.68
CSNK1E-215ENST00000612795 JPH2Q9BR39 696 aaPredicted RBP19.3■□□□□ 0.68
CSNK1E-215ENST00000612795 DOCK6Q96HP0 2047 aa19.3■□□□□ 0.68
CSNK1E-215ENST00000612795 NCOR2Q9Y618 2525 aa19.29■□□□□ 0.68
CSNK1E-215ENST00000612795 MAFO75444 373 aaPredicted RBP19.29■□□□□ 0.68
CSNK1E-215ENST00000612795 OR1G1P47890 313 aa19.29■□□□□ 0.68
CSNK1E-215ENST00000612795 AFF1P51825 1210 aaKnown RBP19.29■□□□□ 0.68
CSNK1E-215ENST00000612795 AKAP17AQ02040 695 aaKnown RBP19.29■□□□□ 0.68
CSNK1E-215ENST00000612795 DCLRE1AQ6PJP8 1040 aa19.29■□□□□ 0.68
CSNK1E-215ENST00000612795 DCLK2Q8N568 766 aa19.29■□□□□ 0.68
CSNK1E-215ENST00000612795 CEP89Q96ST8 783 aa19.29■□□□□ 0.68
CSNK1E-215ENST00000612795 MARCH5Q9NX47 278 aa19.29■□□□□ 0.68
CSNK1E-215ENST00000612795 DDX11L8A8MPP1 907 aa19.28■□□□□ 0.68
CSNK1E-215ENST00000612795 KINO60870 393 aaKnown RBP19.28■□□□□ 0.68
CSNK1E-215ENST00000612795 MRPL10Q7Z7H8 261 aaKnown RBP19.28■□□□□ 0.68
CSNK1E-215ENST00000612795 PJA1Q8NG27 643 aa19.28■□□□□ 0.68
CSNK1E-215ENST00000612795 PHKBQ93100 1093 aa19.28■□□□□ 0.68
CSNK1E-215ENST00000612795 DLL3Q9NYJ7 618 aa19.28■□□□□ 0.68
CSNK1E-215ENST00000612795 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.28■□□□□ 0.68
CSNK1E-215ENST00000612795 DLGAP2Q9P1A6 1054 aa19.28■□□□□ 0.68
CSNK1E-215ENST00000612795 COL4A3BPQ9Y5P4 624 aa19.28■□□□□ 0.68
CSNK1E-215ENST00000612795 SPATA31D3P0C874 917 aa19.27■□□□□ 0.68
CSNK1E-215ENST00000612795 LAMP2P13473 410 aa19.27■□□□□ 0.68
CSNK1E-215ENST00000612795 USP11P51784 963 aa19.27■□□□□ 0.68
CSNK1E-215ENST00000612795 RSPO4Q2I0M5 234 aaPredicted RBP19.27■□□□□ 0.68
CSNK1E-215ENST00000612795 PLA2G4FQ68DD2 849 aa19.27■□□□□ 0.68
CSNK1E-215ENST00000612795 SPATA31D4Q6ZUB0 917 aa19.27■□□□□ 0.68
CSNK1E-215ENST00000612795 TAS1R1Q7RTX1 841 aa19.27■□□□□ 0.68
CSNK1E-215ENST00000612795 ZNF707Q96C28 371 aaPredicted RBP19.27■□□□□ 0.68
CSNK1E-215ENST00000612795 SHDQ96IW2 340 aa19.27■□□□□ 0.68
CSNK1E-215ENST00000612795 FOXQ1Q9C009 403 aa19.27■□□□□ 0.68
CSNK1E-215ENST00000612795 IFT122Q9HBG6 1241 aa19.27■□□□□ 0.68
CSNK1E-215ENST00000612795 NCDNQ9UBB6 729 aa19.27■□□□□ 0.68
CSNK1E-215ENST00000612795 NUMBLQ9Y6R0 609 aa19.27■□□□□ 0.68
CSNK1E-215ENST00000612795 FRYLO94915 3013 aa19.26■□□□□ 0.67
CSNK1E-215ENST00000612795 PRPF3O43395 683 aaKnown RBP19.26■□□□□ 0.67
CSNK1E-215ENST00000612795 PSMD10O75832 226 aa19.26■□□□□ 0.67
CSNK1E-215ENST00000612795 STBD1O95210 358 aa19.26■□□□□ 0.67
CSNK1E-215ENST00000612795 HTR4Q13639 388 aa19.26■□□□□ 0.67
CSNK1E-215ENST00000612795 ADCK5Q3MIX3 580 aa19.26■□□□□ 0.67
CSNK1E-215ENST00000612795 PALB2Q86YC2 1186 aa19.26■□□□□ 0.67
CSNK1E-215ENST00000612795 HDAC7Q8WUI4 952 aa19.26■□□□□ 0.67
CSNK1E-215ENST00000612795 SLC7A3Q8WY07 619 aa19.26■□□□□ 0.67
CSNK1E-215ENST00000612795 PLEKHA4Q9H4M7 779 aa19.26■□□□□ 0.67
CSNK1E-215ENST00000612795 RXFP1Q9HBX9 757 aa19.26■□□□□ 0.67
CSNK1E-215ENST00000612795 SLC2A4RGQ9NR83 387 aa19.26■□□□□ 0.67
CSNK1E-215ENST00000612795 POTEMA6NI47 508 aa19.25■□□□□ 0.67
CSNK1E-215ENST00000612795 NR1I2O75469 434 aa19.25■□□□□ 0.67
CSNK1E-215ENST00000612795 ITGA4P13612 1032 aa19.25■□□□□ 0.67
CSNK1E-215ENST00000612795 NCLP19338 710 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms