RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 NCBP1Q09161 790 aaKnown RBP19.97■□□□□ 0.79
SEMA3B-211ENST00000612509 DMP1Q13316 513 aaPredicted RBP19.97■□□□□ 0.79
SEMA3B-211ENST00000612509 CCDC85BQ15834 202 aaPredicted RBP19.97■□□□□ 0.79
SEMA3B-211ENST00000612509 FAM187BQ17R55 369 aa19.97■□□□□ 0.79
SEMA3B-211ENST00000612509 USP49Q70CQ1 688 aa19.97■□□□□ 0.79
SEMA3B-211ENST00000612509 KRI1Q8N9T8 703 aaKnown RBP19.97■□□□□ 0.79
SEMA3B-211ENST00000612509 LINC00301Q8NCQ3 95 aa19.97■□□□□ 0.79
SEMA3B-211ENST00000612509 EPSTI1Q96J88 318 aa19.97■□□□□ 0.79
SEMA3B-211ENST00000612509 BLOC1S4Q9NUP1 217 aa19.97■□□□□ 0.79
SEMA3B-211ENST00000612509 KCND2Q9NZV8 630 aa19.97■□□□□ 0.79
SEMA3B-211ENST00000612509 PLXNA4Q9HCM2 1894 aa19.96■□□□□ 0.79
SEMA3B-211ENST00000612509 YEATS4O95619 227 aa19.96■□□□□ 0.79
SEMA3B-211ENST00000612509 PRKCBP05771 671 aa19.96■□□□□ 0.79
SEMA3B-211ENST00000612509 MAPK6Q16659 721 aa19.96■□□□□ 0.79
SEMA3B-211ENST00000612509 PTPROQ16827 1216 aa19.96■□□□□ 0.79
SEMA3B-211ENST00000612509 LONRF3Q496Y0 759 aa19.96■□□□□ 0.79
SEMA3B-211ENST00000612509 SPOUT1Q5T280 376 aaKnown RBP19.96■□□□□ 0.79
SEMA3B-211ENST00000612509 RSPH1Q8WYR4 309 aa19.96■□□□□ 0.79
SEMA3B-211ENST00000612509 RAD54LQ92698 747 aa19.96■□□□□ 0.79
SEMA3B-211ENST00000612509 P2RX5Q93086 422 aa19.96■□□□□ 0.79
SEMA3B-211ENST00000612509 PGBD4Q96DM1 585 aa19.96■□□□□ 0.79
SEMA3B-211ENST00000612509 EIF2AQ9BY44 585 aaKnown RBP19.96■□□□□ 0.79
SEMA3B-211ENST00000612509 MRPL9Q9BYD2 267 aaKnown RBP19.96■□□□□ 0.79
SEMA3B-211ENST00000612509 FZD8Q9H461 694 aa19.96■□□□□ 0.79
SEMA3B-211ENST00000612509 CWH43Q9H720 699 aa19.96■□□□□ 0.79
SEMA3B-211ENST00000612509 TYW1Q9NV66 732 aaKnown RBP19.96■□□□□ 0.79
SEMA3B-211ENST00000612509 PHLPP2Q6ZVD8 1323 aa19.96■□□□□ 0.79
SEMA3B-211ENST00000612509 EDN1P05305 212 aa19.95■□□□□ 0.78
SEMA3B-211ENST00000612509 LAG3P18627 525 aa19.95■□□□□ 0.78
SEMA3B-211ENST00000612509 NCLP19338 710 aaKnown RBP19.95■□□□□ 0.78
SEMA3B-211ENST00000612509 TXLNAP40222 546 aa19.95■□□□□ 0.78
SEMA3B-211ENST00000612509 NPTX2P47972 431 aa19.95■□□□□ 0.78
SEMA3B-211ENST00000612509 PEX3P56589 373 aa19.95■□□□□ 0.78
SEMA3B-211ENST00000612509 RAD51AP2Q09MP3 1159 aa19.95■□□□□ 0.78
SEMA3B-211ENST00000612509 BECN1Q14457 450 aa19.95■□□□□ 0.78
SEMA3B-211ENST00000612509 FOXD4L6Q3SYB3 417 aaPredicted RBP19.95■□□□□ 0.78
SEMA3B-211ENST00000612509 FOXD4L3Q6VB84 417 aaPredicted RBP19.95■□□□□ 0.78
SEMA3B-211ENST00000612509 LRRC55Q6ZSA7 311 aa19.95■□□□□ 0.78
SEMA3B-211ENST00000612509 MRPL10Q7Z7H8 261 aaKnown RBP19.95■□□□□ 0.78
SEMA3B-211ENST00000612509 COLGALT1Q8NBJ5 622 aa19.95■□□□□ 0.78
SEMA3B-211ENST00000612509 SMG8Q8ND04 991 aaKnown RBP19.95■□□□□ 0.78
SEMA3B-211ENST00000612509 MRPL38Q96DV4 380 aaKnown RBP19.95■□□□□ 0.78
SEMA3B-211ENST00000612509 AAASQ9NRG9 546 aa19.95■□□□□ 0.78
SEMA3B-211ENST00000612509 IPPQ9Y573 584 aa19.95■□□□□ 0.78
SEMA3B-211ENST00000612509 CCDC169A6NNP5 214 aa19.94■□□□□ 0.78
SEMA3B-211ENST00000612509 SPTLC2O15270 562 aa19.94■□□□□ 0.78
SEMA3B-211ENST00000612509 GRM6O15303 877 aa19.94■□□□□ 0.78
SEMA3B-211ENST00000612509 LIG1P18858 919 aa19.94■□□□□ 0.78
SEMA3B-211ENST00000612509 EFNA5P52803 228 aa19.94■□□□□ 0.78
SEMA3B-211ENST00000612509 PRPF4BQ13523 1007 aaKnown RBP19.94■□□□□ 0.78
SEMA3B-211ENST00000612509 MCM6Q14566 821 aa19.94■□□□□ 0.78
SEMA3B-211ENST00000612509 TIGD5Q53EQ6 642 aa19.94■□□□□ 0.78
SEMA3B-211ENST00000612509 NAALADL2Q58DX5 795 aa19.94■□□□□ 0.78
SEMA3B-211ENST00000612509 SLC27A1Q6PCB7 646 aa19.94■□□□□ 0.78
SEMA3B-211ENST00000612509 GLB1LQ6UWU2 654 aa19.94■□□□□ 0.78
SEMA3B-211ENST00000612509 AGMOQ6ZNB7 445 aa19.94■□□□□ 0.78
SEMA3B-211ENST00000612509 GPBP1Q86WP2 473 aa19.94■□□□□ 0.78
SEMA3B-211ENST00000612509 CDR2LQ86X02 465 aaPredicted RBP19.94■□□□□ 0.78
SEMA3B-211ENST00000612509 KLHL23Q8NBE8 558 aa19.94■□□□□ 0.78
SEMA3B-211ENST00000612509 CNNM3Q8NE01 707 aa19.94■□□□□ 0.78
SEMA3B-211ENST00000612509 LARP4BQ92615 738 aaKnown RBP19.94■□□□□ 0.78
SEMA3B-211ENST00000612509 TRIM6Q9C030 488 aaPredicted RBP19.94■□□□□ 0.78
SEMA3B-211ENST00000612509 LMAN2LQ9H0V9 348 aa19.94■□□□□ 0.78
SEMA3B-211ENST00000612509 RSAD1Q9HA92 442 aa19.94■□□□□ 0.78
SEMA3B-211ENST00000612509 C17orf75Q9HAS0 396 aa19.94■□□□□ 0.78
SEMA3B-211ENST00000612509 ARHGAP28Q9P2N2 729 aa19.94■□□□□ 0.78
SEMA3B-211ENST00000612509 TFIP11Q9UBB9 837 aaKnown RBP19.94■□□□□ 0.78
SEMA3B-211ENST00000612509 CCDC39Q9UFE4 941 aa19.94■□□□□ 0.78
SEMA3B-211ENST00000612509 INPP5FQ9Y2H2 1132 aa19.94■□□□□ 0.78
SEMA3B-211ENST00000612509 PCDHB12Q9Y5F1 795 aa19.94■□□□□ 0.78
SEMA3B-211ENST00000612509 NPHP3-ACAD11A0A0J9YXS1 232 aa19.93■□□□□ 0.78
SEMA3B-211ENST00000612509 A0A1B0GUA9 196 aa19.93■□□□□ 0.78
SEMA3B-211ENST00000612509 TTLL13PA6NNM8 815 aa19.93■□□□□ 0.78
SEMA3B-211ENST00000612509 ACKR2O00590 384 aa19.93■□□□□ 0.78
SEMA3B-211ENST00000612509 PPP6R2O75170 966 aa19.93■□□□□ 0.78
SEMA3B-211ENST00000612509 NPTXRO95502 500 aa19.93■□□□□ 0.78
SEMA3B-211ENST00000612509 BRD1O95696 1058 aa19.93■□□□□ 0.78
SEMA3B-211ENST00000612509 ITGB1P05556 798 aa19.93■□□□□ 0.78
SEMA3B-211ENST00000612509 CACNB1Q02641 598 aaPredicted RBP19.93■□□□□ 0.78
SEMA3B-211ENST00000612509 DHX8Q14562 1220 aaKnown RBP19.93■□□□□ 0.78
SEMA3B-211ENST00000612509 TMEM132AQ24JP5 1023 aa19.93■□□□□ 0.78
SEMA3B-211ENST00000612509 NXF3Q9H4D5 531 aaKnown RBP19.93■□□□□ 0.78
SEMA3B-211ENST00000612509 PDZD7Q9H5P4 517 aa19.93■□□□□ 0.78
SEMA3B-211ENST00000612509 KMT5AQ9NQR1 393 aa19.93■□□□□ 0.78
SEMA3B-211ENST00000612509 STK17AQ9UEE5 414 aa19.93■□□□□ 0.78
SEMA3B-211ENST00000612509 PLAGL2Q9UPG8 496 aa19.93■□□□□ 0.78
SEMA3B-211ENST00000612509 N4BP3O15049 544 aa19.92■□□□□ 0.78
SEMA3B-211ENST00000612509 OFD1O75665 1012 aa19.92■□□□□ 0.78
SEMA3B-211ENST00000612509 ITGA4P13612 1032 aa19.92■□□□□ 0.78
SEMA3B-211ENST00000612509 PLS3P13797 630 aa19.92■□□□□ 0.78
SEMA3B-211ENST00000612509 CSPP1Q1MSJ5 1256 aa19.92■□□□□ 0.78
SEMA3B-211ENST00000612509 ARSHQ5FYA8 562 aa19.92■□□□□ 0.78
SEMA3B-211ENST00000612509 NOMO2Q5JPE7 1267 aa19.92■□□□□ 0.78
SEMA3B-211ENST00000612509 THNSL1Q8IYQ7 743 aa19.92■□□□□ 0.78
SEMA3B-211ENST00000612509 URGCPQ8TCY9 931 aa19.92■□□□□ 0.78
SEMA3B-211ENST00000612509 REEP2Q9BRK0 252 aa19.92■□□□□ 0.78
SEMA3B-211ENST00000612509 ALG13Q9NP73 1137 aaKnown RBP19.92■□□□□ 0.78
SEMA3B-211ENST00000612509 PRDM6Q9NQX0 595 aa19.92■□□□□ 0.78
SEMA3B-211ENST00000612509 TBC1D13Q9NVG8 400 aa19.92■□□□□ 0.78
SEMA3B-211ENST00000612509 ODF2LQ9ULJ1 636 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms