RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 ERVK-5Q9HDB9 667 aa9.74□□□□□ -0.85
SMAD4-217ENST00000611848 ST3GAL5Q9UNP4 418 aa9.74□□□□□ -0.85
SMAD4-217ENST00000611848 LAMA3Q16787 3333 aa9.73□□□□□ -0.85
SMAD4-217ENST00000611848 AMHP03971 560 aa9.73□□□□□ -0.85
SMAD4-217ENST00000611848 SRGAP2CP0DJJ0 459 aa9.73□□□□□ -0.85
SMAD4-217ENST00000611848 ATP2A2P16615 1042 aaKnown RBP9.73□□□□□ -0.85
SMAD4-217ENST00000611848 PLCG1P19174 1290 aa9.73□□□□□ -0.85
SMAD4-217ENST00000611848 SFPQP23246 707 aaKnown RBP eCLIP9.73□□□□□ -0.85
SMAD4-217ENST00000611848 GLRA2P23416 452 aa9.73□□□□□ -0.85
SMAD4-217ENST00000611848 PHKA2P46019 1235 aa9.73□□□□□ -0.85
SMAD4-217ENST00000611848 SLC12A3P55017 1021 aa9.73□□□□□ -0.85
SMAD4-217ENST00000611848 PTENP60484 403 aa9.73□□□□□ -0.85
SMAD4-217ENST00000611848 PPP2R5AQ15172 486 aa9.73□□□□□ -0.85
SMAD4-217ENST00000611848 PCBP1Q15365 356 aaKnown RBP eCLIP9.73□□□□□ -0.85
SMAD4-217ENST00000611848 RRAGBQ5VZM2 374 aa9.73□□□□□ -0.85
SMAD4-217ENST00000611848 C1orf186Q6ZWK4 172 aa9.73□□□□□ -0.85
SMAD4-217ENST00000611848 MAEAQ7L5Y9 396 aa9.73□□□□□ -0.85
SMAD4-217ENST00000611848 TRIML1Q8N9V2 468 aa9.73□□□□□ -0.85
SMAD4-217ENST00000611848 RNF149Q8NC42 400 aa9.73□□□□□ -0.85
SMAD4-217ENST00000611848 ASAP3Q8TDY4 903 aa9.73□□□□□ -0.85
SMAD4-217ENST00000611848 CACTINQ8WUQ7 758 aaKnown RBP9.73□□□□□ -0.85
SMAD4-217ENST00000611848 LARP4BQ92615 738 aaKnown RBP9.73□□□□□ -0.85
SMAD4-217ENST00000611848 NFKBIZQ9BYH8 718 aa9.73□□□□□ -0.85
SMAD4-217ENST00000611848 HSD3B7Q9H2F3 369 aa9.73□□□□□ -0.85
SMAD4-217ENST00000611848 TSPYL2Q9H2G4 693 aaPredicted RBP9.73□□□□□ -0.85
SMAD4-217ENST00000611848 IFT122Q9HBG6 1241 aa9.73□□□□□ -0.85
SMAD4-217ENST00000611848 BLOC1S4Q9NUP1 217 aa9.73□□□□□ -0.85
SMAD4-217ENST00000611848 IMPACTQ9P2X3 320 aa9.73□□□□□ -0.85
SMAD4-217ENST00000611848 STK17AQ9UEE5 414 aa9.73□□□□□ -0.85
SMAD4-217ENST00000611848 SERTAD1Q9UHV2 236 aa9.73□□□□□ -0.85
SMAD4-217ENST00000611848 PTPRSQ13332 1948 aa9.73□□□□□ -0.85
SMAD4-217ENST00000611848 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.72□□□□□ -0.85
SMAD4-217ENST00000611848 ENPP3O14638 875 aa9.72□□□□□ -0.85
SMAD4-217ENST00000611848 SSBP05455 408 aaKnown RBP eCLIP9.72□□□□□ -0.85
SMAD4-217ENST00000611848 ZSCAN20P17040 1043 aaPredicted RBP9.72□□□□□ -0.85
SMAD4-217ENST00000611848 BMP6P22004 513 aa9.72□□□□□ -0.85
SMAD4-217ENST00000611848 GUCY2CP25092 1073 aa9.72□□□□□ -0.85
SMAD4-217ENST00000611848 MYL5Q02045 173 aa9.72□□□□□ -0.85
SMAD4-217ENST00000611848 LRMPQ12912 555 aa9.72□□□□□ -0.85
SMAD4-217ENST00000611848 MORC3Q14149 939 aa9.72□□□□□ -0.85
SMAD4-217ENST00000611848 LRRC8AQ8IWT6 810 aa9.72□□□□□ -0.85
SMAD4-217ENST00000611848 C17orf53Q8N3J3 647 aaPredicted RBP9.72□□□□□ -0.85
SMAD4-217ENST00000611848 MLKLQ8NB16 471 aa9.72□□□□□ -0.85
SMAD4-217ENST00000611848 RAD54LQ92698 747 aa9.72□□□□□ -0.85
SMAD4-217ENST00000611848 IFT74Q96LB3 600 aa9.72□□□□□ -0.85
SMAD4-217ENST00000611848 DRC1Q96MC2 740 aa9.72□□□□□ -0.85
SMAD4-217ENST00000611848 TMX1Q9H3N1 280 aa9.72□□□□□ -0.85
SMAD4-217ENST00000611848 C17orf75Q9HAS0 396 aa9.72□□□□□ -0.85
SMAD4-217ENST00000611848 GPRC5CQ9NQ84 441 aa9.72□□□□□ -0.85
SMAD4-217ENST00000611848 CHST12Q9NRB3 414 aa9.72□□□□□ -0.85
SMAD4-217ENST00000611848 C1orf112Q9NSG2 853 aa9.72□□□□□ -0.85
SMAD4-217ENST00000611848 KCNG1Q9UIX4 513 aa9.72□□□□□ -0.85
SMAD4-217ENST00000611848 MAN1B1Q9UKM7 699 aa9.72□□□□□ -0.85
SMAD4-217ENST00000611848 R3HCC1Q9Y3T6 440 aaKnown RBP9.72□□□□□ -0.85
SMAD4-217ENST00000611848 GBF1Q92538 1859 aa9.72□□□□□ -0.85
SMAD4-217ENST00000611848 A0A087X0B3 334 aa9.71□□□□□ -0.85
SMAD4-217ENST00000611848 DENND3A2RUS2 1198 aa9.71□□□□□ -0.85
SMAD4-217ENST00000611848 SLFN14P0C7P3 912 aa9.71□□□□□ -0.85
SMAD4-217ENST00000611848 NAMPTP43490 491 aa9.71□□□□□ -0.85
SMAD4-217ENST00000611848 GSDMDP57764 484 aa9.71□□□□□ -0.85
SMAD4-217ENST00000611848 DEFB103AP81534 67 aa9.71□□□□□ -0.85
SMAD4-217ENST00000611848 CAPSQ13938 189 aa9.71□□□□□ -0.85
SMAD4-217ENST00000611848 MCM6Q14566 821 aa9.71□□□□□ -0.85
SMAD4-217ENST00000611848 CT47A1Q5JQC4 288 aaPredicted RBP9.71□□□□□ -0.85
SMAD4-217ENST00000611848 ISM2Q6H9L7 571 aa9.71□□□□□ -0.85
SMAD4-217ENST00000611848 GPR153Q6NV75 609 aa9.71□□□□□ -0.85
SMAD4-217ENST00000611848 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.71□□□□□ -0.854e-7■□□□□ 10
SMAD4-217ENST00000611848 CATSPER4Q7RTX7 472 aa9.71□□□□□ -0.85
SMAD4-217ENST00000611848 RTN4RL1Q86UN2 441 aaPredicted RBP9.71□□□□□ -0.85
SMAD4-217ENST00000611848 ZBTB8OSQ8IWT0 167 aa9.71□□□□□ -0.85
SMAD4-217ENST00000611848 MYOCDQ8IZQ8 938 aa9.71□□□□□ -0.85
SMAD4-217ENST00000611848 LRRC15Q8TF66 581 aa9.71□□□□□ -0.85
SMAD4-217ENST00000611848 SMARCE1Q969G3 411 aa9.71□□□□□ -0.85
SMAD4-217ENST00000611848 TOP1MTQ969P6 601 aa9.71□□□□□ -0.85
SMAD4-217ENST00000611848 PYM1Q9BRP8 204 aaKnown RBP9.71□□□□□ -0.85
SMAD4-217ENST00000611848 RUSC1Q9BVN2 902 aa9.71□□□□□ -0.85
SMAD4-217ENST00000611848 C2orf40Q9H1Z8 148 aa9.71□□□□□ -0.85
SMAD4-217ENST00000611848 RGS18Q9NS28 235 aa9.71□□□□□ -0.85
SMAD4-217ENST00000611848 MSRAQ9UJ68 235 aa9.71□□□□□ -0.85
SMAD4-217ENST00000611848 LRRIQ4A6NIV6 560 aa9.71□□□□□ -0.86
SMAD4-217ENST00000611848 GRXCR1A8MXD5 290 aa9.71□□□□□ -0.86
SMAD4-217ENST00000611848 HIP1RO75146 1068 aa9.71□□□□□ -0.86
SMAD4-217ENST00000611848 CSDE1O75534 798 aaKnown RBP9.71□□□□□ -0.86
SMAD4-217ENST00000611848 GJB5O95377 273 aa9.71□□□□□ -0.86
SMAD4-217ENST00000611848 PRR29P0C7W0 189 aa9.71□□□□□ -0.86
SMAD4-217ENST00000611848 STAT6P42226 847 aa9.71□□□□□ -0.86
SMAD4-217ENST00000611848 FANCCQ00597 558 aa9.71□□□□□ -0.86
SMAD4-217ENST00000611848 NCBP1Q09161 790 aaKnown RBP9.71□□□□□ -0.86
SMAD4-217ENST00000611848 DMP1Q13316 513 aaPredicted RBP9.71□□□□□ -0.86
SMAD4-217ENST00000611848 DHX8Q14562 1220 aaKnown RBP9.71□□□□□ -0.86
SMAD4-217ENST00000611848 DSC3Q14574 896 aa9.71□□□□□ -0.86
SMAD4-217ENST00000611848 RAB30Q15771 203 aa9.71□□□□□ -0.86
SMAD4-217ENST00000611848 NAALADL2Q58DX5 795 aa9.71□□□□□ -0.86
SMAD4-217ENST00000611848 CDCA2Q69YH5 1023 aaPredicted RBP9.71□□□□□ -0.86
SMAD4-217ENST00000611848 FAM109BQ6ICB4 259 aaPredicted RBP9.71□□□□□ -0.86
SMAD4-217ENST00000611848 SLC24A5Q71RS6 500 aa9.71□□□□□ -0.86
SMAD4-217ENST00000611848 SV2BQ7L1I2 683 aa9.71□□□□□ -0.86
SMAD4-217ENST00000611848 GPBP1Q86WP2 473 aa9.71□□□□□ -0.86
SMAD4-217ENST00000611848 HERC6Q8IVU3 1022 aa9.71□□□□□ -0.86
SMAD4-217ENST00000611848 LINC01599Q8WXQ3 324 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms