RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 KCTD10Q9H3F6 313 aa13.25□□□□□ -0.29
CLK4-215ENST00000611733 HOXA11P31270 313 aaPredicted RBP13.24□□□□□ -0.29
CLK4-215ENST00000611733 EFNA5P52803 228 aa13.24□□□□□ -0.29
CLK4-215ENST00000611733 MAPK6Q16659 721 aa13.24□□□□□ -0.29
CLK4-215ENST00000611733 KNOP1Q1ED39 458 aaKnown RBP13.24□□□□□ -0.29
CLK4-215ENST00000611733 BMT2Q1RMZ1 405 aa13.24□□□□□ -0.29
CLK4-215ENST00000611733 TCTN1Q2MV58 587 aa13.24□□□□□ -0.29
CLK4-215ENST00000611733 ANO6Q4KMQ2 910 aa13.24□□□□□ -0.29
CLK4-215ENST00000611733 MAP4K3Q8IVH8 894 aa13.24□□□□□ -0.29
CLK4-215ENST00000611733 C7orf61Q8IZ16 206 aa13.24□□□□□ -0.29
CLK4-215ENST00000611733 VWCEQ96DN2 955 aa13.24□□□□□ -0.29
CLK4-215ENST00000611733 EEF2KMTQ96G04 330 aa13.24□□□□□ -0.29
CLK4-215ENST00000611733 ACCSQ96QU6 501 aa13.24□□□□□ -0.29
CLK4-215ENST00000611733 HAPLN2Q9GZV7 340 aa13.24□□□□□ -0.29
CLK4-215ENST00000611733 KCNG1Q9UIX4 513 aa13.24□□□□□ -0.29
CLK4-215ENST00000611733 ST3GAL5Q9UNP4 418 aa13.24□□□□□ -0.29
CLK4-215ENST00000611733 PITPNM1O00562 1244 aa13.24□□□□□ -0.29
CLK4-215ENST00000611733 ACKR2O00590 384 aa13.24□□□□□ -0.29
CLK4-215ENST00000611733 EIF3DO15371 548 aaKnown RBP eCLIP13.24□□□□□ -0.29
CLK4-215ENST00000611733 TSPAN1O60635 241 aa13.24□□□□□ -0.29
CLK4-215ENST00000611733 CAND2O75155 1236 aa13.24□□□□□ -0.29
CLK4-215ENST00000611733 RPS6KA5O75582 802 aa13.24□□□□□ -0.29
CLK4-215ENST00000611733 CCDC192P0DO97 292 aa13.24□□□□□ -0.29
CLK4-215ENST00000611733 NFX1Q12986 1120 aaKnown RBP13.24□□□□□ -0.29
CLK4-215ENST00000611733 STX1AQ16623 288 aa13.24□□□□□ -0.29
CLK4-215ENST00000611733 EEF1DP3Q658K8 133 aa13.24□□□□□ -0.29
CLK4-215ENST00000611733 ANKRD40Q6AI12 368 aa13.24□□□□□ -0.29
CLK4-215ENST00000611733 CATSPER4Q7RTX7 472 aa13.24□□□□□ -0.29
CLK4-215ENST00000611733 MLKLQ8NB16 471 aa13.24□□□□□ -0.29
CLK4-215ENST00000611733 ZSWIM2Q8NEG5 633 aa13.24□□□□□ -0.29
CLK4-215ENST00000611733 PADI3Q9ULW8 664 aa13.24□□□□□ -0.29
CLK4-215ENST00000611733 CTNND2Q9UQB3 1225 aa13.24□□□□□ -0.29
CLK4-215ENST00000611733 SIP14410 1827 aa13.24□□□□□ -0.29
CLK4-215ENST00000611733 ALPK3Q96L96 1907 aa13.24□□□□□ -0.29
CLK4-215ENST00000611733 PHLPP2Q6ZVD8 1323 aa13.23□□□□□ -0.29
CLK4-215ENST00000611733 KIAA0355O15063 1070 aa13.23□□□□□ -0.29
CLK4-215ENST00000611733 CLIC2O15247 247 aa13.23□□□□□ -0.29
CLK4-215ENST00000611733 SYN1P17600 705 aa13.23□□□□□ -0.29
CLK4-215ENST00000611733 ARF4P18085 180 aaPredicted RBP13.23□□□□□ -0.29
CLK4-215ENST00000611733 ADSSP30520 456 aa13.23□□□□□ -0.29
CLK4-215ENST00000611733 STRN3Q13033 797 aa13.23□□□□□ -0.29
CLK4-215ENST00000611733 PRPF4BQ13523 1007 aaKnown RBP13.23□□□□□ -0.29
CLK4-215ENST00000611733 COBLL1Q53SF7 1204 aa13.23□□□□□ -0.29
CLK4-215ENST00000611733 LRSAM1Q6UWE0 723 aa13.23□□□□□ -0.29
CLK4-215ENST00000611733 SYCP3Q8IZU3 236 aa13.23□□□□□ -0.29
CLK4-215ENST00000611733 CCDC155Q8N6L0 562 aa13.23□□□□□ -0.29
CLK4-215ENST00000611733 NELFBQ8WX92 580 aa13.23□□□□□ -0.29
CLK4-215ENST00000611733 KCNN1Q92952 543 aa13.23□□□□□ -0.29
CLK4-215ENST00000611733 ACO2Q99798 780 aaKnown RBP13.23□□□□□ -0.29
CLK4-215ENST00000611733 TMX1Q9H3N1 280 aa13.23□□□□□ -0.29
CLK4-215ENST00000611733 ANO10Q9NW15 660 aa13.23□□□□□ -0.29
CLK4-215ENST00000611733 H0YCG3 227 aa13.22□□□□□ -0.29
CLK4-215ENST00000611733 TIMP1P01033 207 aa13.22□□□□□ -0.29
CLK4-215ENST00000611733 RPLP2P05387 115 aaKnown RBP13.22□□□□□ -0.29
CLK4-215ENST00000611733 ZNF445P59923 1031 aa13.22□□□□□ -0.29
CLK4-215ENST00000611733 FAM187BQ17R55 369 aa13.22□□□□□ -0.29
CLK4-215ENST00000611733 CENPPQ6IPU0 288 aa13.22□□□□□ -0.29
CLK4-215ENST00000611733 DEFB128Q7Z7B8 93 aa13.22□□□□□ -0.29
CLK4-215ENST00000611733 GAS2L3Q86XJ1 694 aa13.22□□□□□ -0.29
CLK4-215ENST00000611733 SLC17A8Q8NDX2 589 aa13.22□□□□□ -0.29
CLK4-215ENST00000611733 BICD1Q96G01 975 aa13.22□□□□□ -0.29
CLK4-215ENST00000611733 ERVK-5Q9HDB9 667 aa13.22□□□□□ -0.29
CLK4-215ENST00000611733 PRMT7Q9NVM4 692 aaPredicted RBP13.22□□□□□ -0.29
CLK4-215ENST00000611733 MGEA5O60502 916 aa13.22□□□□□ -0.29
CLK4-215ENST00000611733 RAG1P15918 1043 aa13.22□□□□□ -0.29
CLK4-215ENST00000611733 ALCAMQ13740 583 aa13.22□□□□□ -0.29
CLK4-215ENST00000611733 PPP4R3CPQ6ZMV5 832 aa13.22□□□□□ -0.29
CLK4-215ENST00000611733 STXBP4Q6ZWJ1 553 aa13.22□□□□□ -0.29
CLK4-215ENST00000611733 ZBTB33Q86T24 672 aa13.22□□□□□ -0.29
CLK4-215ENST00000611733 ZNF710Q8N1W2 664 aa13.22□□□□□ -0.29
CLK4-215ENST00000611733 DPF3Q92784 378 aa13.22□□□□□ -0.29
CLK4-215ENST00000611733 P2RX5Q93086 422 aa13.22□□□□□ -0.29
CLK4-215ENST00000611733 HVCN1Q96D96 273 aa13.22□□□□□ -0.29
CLK4-215ENST00000611733 DHTKD1Q96HY7 919 aaPredicted RBP13.22□□□□□ -0.29
CLK4-215ENST00000611733 DUSP9Q99956 384 aaKnown RBP13.22□□□□□ -0.29
CLK4-215ENST00000611733 CBWD1Q9BRT8 395 aa13.22□□□□□ -0.29
CLK4-215ENST00000611733 PCIF1Q9H4Z3 704 aa13.22□□□□□ -0.29
CLK4-215ENST00000611733 ZMYND8Q9ULU4 1186 aaPredicted RBP13.22□□□□□ -0.29
CLK4-215ENST00000611733 ABLIM1O14639 778 aa13.21□□□□□ -0.29
CLK4-215ENST00000611733 HNRNPDLO14979 420 aaKnown RBP13.21□□□□□ -0.29
CLK4-215ENST00000611733 ERLIN2O94905 339 aa13.21□□□□□ -0.29
CLK4-215ENST00000611733 CSF2RAP15509 400 aa13.21□□□□□ -0.29
CLK4-215ENST00000611733 CCNE1P24864 410 aa13.21□□□□□ -0.29
CLK4-215ENST00000611733 ZCWPW2Q504Y3 356 aa13.21□□□□□ -0.29
CLK4-215ENST00000611733 SEZ6Q53EL9 994 aa13.21□□□□□ -0.29
CLK4-215ENST00000611733 ATF7IP2Q5U623 682 aa13.21□□□□□ -0.29
CLK4-215ENST00000611733 TSHZ1Q6ZSZ6 1077 aa13.21□□□□□ -0.29
CLK4-215ENST00000611733 RTN4RL1Q86UN2 441 aaPredicted RBP13.21□□□□□ -0.29
CLK4-215ENST00000611733 DBF4BQ8NFT6 615 aa13.21□□□□□ -0.29
CLK4-215ENST00000611733 MRPL4Q9BYD3 311 aaKnown RBP13.21□□□□□ -0.29
CLK4-215ENST00000611733 GBP3Q9H0R5 595 aa13.21□□□□□ -0.29
CLK4-215ENST00000611733 PDZD7Q9H5P4 517 aa13.21□□□□□ -0.29
CLK4-215ENST00000611733 TMEM206Q9H813 350 aa13.21□□□□□ -0.29
CLK4-215ENST00000611733 PTPRHQ9HD43 1115 aa13.21□□□□□ -0.29
CLK4-215ENST00000611733 AGPAT3Q9NRZ7 376 aa13.21□□□□□ -0.29
CLK4-215ENST00000611733 A0A1B0GUA9 196 aa13.21□□□□□ -0.3
CLK4-215ENST00000611733 EVI5O60447 810 aa13.21□□□□□ -0.3
CLK4-215ENST00000611733 PIGRP01833 764 aa13.21□□□□□ -0.3
CLK4-215ENST00000611733 SFPQP23246 707 aaKnown RBP eCLIP13.21□□□□□ -0.3
CLK4-215ENST00000611733 LIG4P49917 911 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms